Factsheet for Os01t0609000-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0609200-00	Rice	plasma membrane	90.33	90.57
Os01t0609300-01	Rice	plasma membrane	73.02	82.91
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	82.29	82.57
KXG32860	Sorghum	plasma membrane	79.22	79.49
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	61.1	78.62
GSMUA_Achr9P02950_001	Banana	plasma membrane	70.37	74.37
Os01t0609900-02	Rice	plasma membrane	68.87	72.84
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	30.99	72.8
GSMUA_Achr6P34530_001	Banana	plasma membrane	64.99	72.33
Os01t0342750-01	Rice	plasma membrane	34.4	72.04
Os08t0384500-01	Rice	plasma membrane	37.33	71.82
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	68.12	70.37
Solyc12g019640.1.1	Tomato	plasma membrane	28.88	69.74
VIT_04s0008g04790.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	67.17	68.66
Solyc08g067620.2.1	Tomato	nucleus	67.92	68.62
KRH23522	Soybean	mitochondrion	66.62	68.58
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	58.11	68.51
KRH52503	Soybean	cytosol, peroxisome, plasma membrane	67.57	68.51
KRH61824	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	67.44	68.32
VIT_09s0002g05560.t01	Wine grape	plasma membrane	67.64	68.29
KRH47506	Soybean	endoplasmic reticulum	66.28	68.23
KRH09797	Soybean	endoplasmic reticulum	66.14	68.04
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	65.05	67.59
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	65.05	67.59
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	64.99	67.56
Solyc12g098210.1.1	Tomato	plastid	65.46	67.44
CDY39660	Canola	cytosol, nucleus, plasma membrane	64.99	67.42
PGSC0003DMT400076208	Potato	plastid	66.01	67.29
Solyc09g091660.2.1	Tomato	plastid	65.87	67.15
PGSC0003DMT400076209	Potato	plasma membrane	65.4	66.99
AT1G15520.1	Thale cress	plastid	64.92	66.97
KRH67471	Soybean	endoplasmic reticulum	65.67	66.71
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	64.71	66.2
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	64.65	66.13
KRH16029	Soybean	cytosol	65.12	66.07
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	54.5	65.74
KRH05088	Soybean	endoplasmic reticulum	64.71	65.65
KRG95762	Soybean	mitochondrion	63.62	65.31
Os09t0333000-00	Rice	plasma membrane	35.9	64.9
KRH47220	Soybean	plasma membrane	41.08	63.41
KRH09795	Soybean	endoplasmic reticulum	64.58	62.7
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	66.89	62.15
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	6.4	61.84
Os02t0318500-00	Rice	plasma membrane	19.07	61.27
Os09t0332300-00	Rice	plasma membrane	34.2	60.77
Os07t0522500-01	Rice	plasma membrane	20.16	59.56
Os01t0177900-01	Rice	plasma membrane	56.95	58.63
Os06t0554800-01	Rice	plasma membrane	46.59	58.61
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	62.87	57.29
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	32.56	57.11
Os01t0516900-00	Rice	plasma membrane	26.84	56.13
Os11t0587600-01	Rice	plasma membrane	24.32	53.68
Os08t0544400-01	Rice	plasma membrane	17.23	53.26
Os12t0512700-01	Rice	cytosol, peroxisome	25.14	48.24
VIT_04s0008g04840.t01	Wine grape	plasma membrane	35.9	47.1
Os01t0724500-01	Rice	plasma membrane	6.4	45.85
Os02t0528900-01	Rice	cytosol, plasma membrane	9.2	44.7
Os12t0239900-01	Rice	plasma membrane	1.7	34.72
Os07t0522600-02	Rice	plasma membrane	0.07	0.16

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	EMBL:AP002844	ProteinID:BAH91190.1	ProteinID:BAS73099.1	ProteinID:CAD59567.1
ProteinID:DAA00884.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	EnsemblPlantsGene:Os01g0609000	EnsemblPlants:Os01t0609000-00	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005
PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF273
UniProt:Q7PC80	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00001D9706	SEG:seg

Description

PLEIOTROPIC DRUG RESISTANCE 10Similar to Pleiotropic drug resistance protein 3. (Os01t0609000-00)

Coordinates

chr1:-:24047446..24055918

Molecular Weight (calculated)

164317.0 Da

IEP (calculated)

6.909

GRAVY (calculated)

0.114

Length

1468 amino acids

Sequence
(BLAST)

0001: MSSAGVVEMQ KAASFRREGG GSMASMWLSA DGNGAFSRSS SSSSRRMRGE EDDEEALRWA ALQKLPTYDR VRAAILPMVE GEGGEAGGGG GGRRVVVDVH
0101: SLGPHERRAL LERLVRVADD DNERFLLKLK ERISRVGIDM PTIEVRFEHL EVEAEVRVGN SGIPTVLNSI TNKIEEAANA LGILPTRKQT LRILHDISGI
0201: IKPKRMTLLL GPPGSGKTTF LLALAGRLKD LKFSGQVTYN GHQMEDFVPQ RTAAYISQHD LHIGEMTVRE TLSFSARCQG VGSRFDMLTE LTRREKAANI
0301: KPDADVDAFM KASAMEGQES NLITDYILKI LGLEICADTM VGDDMVRGIS GGQRKRVTTG EMLVGPANAF FMDEISTGLD SSTTFQIVKS LRQTIHILGG
0401: TAVISLLQPA PETYDLFDDI ILLSDGHIVY QGPRENVLEF FELMGFKCPE RKGVADFLQE VTSRKDQKQY WAQHDKPYRY VPIKEFASAF QSFHTGRSIA
0501: NELATPFDKS KSHPAALTTS RYGVSAMELL KANIDRELLL IKRNSFVYIF RTIQLMTVSA MAMTVFFRTK MHRDSVADGV IFMGALFFAV MMIMLNGLSE
0601: LPLTIFKLPV FFKQRDLLFF PAWTYTIPSW ILKSPMSFIE VGGFCFMSYY VIGFDPNVGR FFKQYLLMLA VSQMAAALFR FVGGAARNLI VANVFGSFML
0701: LIFMVLGGFI LARDKVNKWW IWGYWISPMM YAQNAVSVNE FLGHSWDKVL NNSLSNETLG VQALMSRGIF PEAKWYWIGF GALLGFIMLF NILFTLALTY
0801: LKPDGKSQPS ISEEELKEKQ ANINGNVLDV DTMASSNNLA IVGSTGTGSE IADNSQPTQR GMVLPFTPLS LTFEDIKYSV DMPQEMKAHG IVEDRLELLK
0901: GVSGCFRPGV LTALMGVSGA GKTTLMDVLA GRKTGGYIEG NISISGYPKK QETFARVSGY CEQNDIHSPQ VTVSESLLFS AWLRLPKDVD SNTRKMFIEE
1001: VMELVELKPL RDALVGLPGV NGLSIEQRKR LTIAVELVAN PSIIFMDEPT SGLDARAAAI VMRTVRNTVN TGRTVVCTIH QPSIDIFEAF DELFLMKRGG
1101: EEIYVGPLGH HSSELIKYFE GIQGVSKITD GYNPATWMLE VTTVSQEQAL DVDFCDIYRK SELFQRNKAL IQELSTPPPG SSELYFPTQY SQSFLIQCLA
1201: CLWKQHLSYW RNPPYNAIRL FFTTVIALIF GTIFWDLGGK MGQSQDLFNA MGSMYAAVLF IGVLNGQSVQ PVVSVERTVF YRERAAGMYS ALPYAFGQVA
1301: IEFPYTLVQS VIYSIIVYSM IGFQWTVAKF FWYLFFMFFT LLYFTFYGMM AVGLTPSYHV ASIVSSAFYA IWNLFTGFVI SRPATPVWWR WYCWICPVAW
1401: TLYGLIVSQY GDIVTPMDDG IPVNVFVENY FDFKHSWLGF VAVVIVAFTM LFAFLFGFAI MKLNFQKR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.