Factsheet for Solyc09g091660.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

plastid: 22908117
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076208	Potato	plastid	98.4	98.4
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	81.53	83.14
Solyc12g098210.1.1	Tomato	plastid	81.94	82.81
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	80.83	81.11
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	74.86	75.86
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	60.07	75.81
KRH23522	Soybean	mitochondrion	74.24	74.96
KRH09797	Soybean	endoplasmic reticulum	73.82	74.49
VIT_09s0002g05560.t01	Wine grape	plasma membrane	74.31	73.59
KRH47506	Soybean	endoplasmic reticulum	71.81	72.51
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	70.76	72.12
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	70.76	72.12
GSMUA_Achr6P34530_001	Banana	plasma membrane	66.04	72.1
Solyc12g019640.1.1	Tomato	plasma membrane	30.35	71.88
CDY39660	Canola	cytosol, nucleus, plasma membrane	70.62	71.87
GSMUA_Achr9P02950_001	Banana	plasma membrane	69.31	71.85
Os01t0609300-01	Rice	plasma membrane	64.31	71.62
AT1G15520.1	Thale cress	plastid	70.76	71.61
Solyc08g067620.2.1	Tomato	nucleus	71.11	70.47
KRH67471	Soybean	endoplasmic reticulum	70.07	69.83
Zm00001d011315_P002	Maize	plasma membrane	69.58	69.39
TraesCS3B01G248400.1	Wheat	cytosol, peroxisome, plasma membrane	70.0	69.33
TraesCS3D01G234400.1	Wheat	plasma membrane	69.93	69.26
Os01t0609900-02	Rice	plasma membrane	66.6	69.09
KRG95762	Soybean	mitochondrion	68.61	69.09
HORVU3Hr1G053350.8	Barley	vacuole	69.79	68.98
Os08t0384500-01	Rice	plasma membrane	36.53	68.94
TraesCS3A01G217900.1	Wheat	cytosol	69.58	68.91
EES03260	Sorghum	plasma membrane	60.97	68.59
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	68.96	68.44
KXG32865	Sorghum	plasma membrane	69.24	68.38
TraesCS7B01G292700.1	Wheat	plasma membrane	67.85	68.32
HORVU7Hr1G092510.2	Barley	plasma membrane	68.26	68.22
TraesCS7D01G386600.1	Wheat	plasma membrane	68.12	67.89
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	68.89	67.81
TraesCS7A01G391100.1	Wheat	plasma membrane	67.92	67.78
TraesCS3A01G218000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.06	67.63
TraesCS3D01G234300.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.06	67.63
TraesCS3B01G248500.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	67.99	67.56
HORVU7Hr1G092380.8	Barley	cytosol	67.85	67.52
TraesCS7D01G386500.1	Wheat	plasma membrane	67.92	67.36
Os01t0342750-01	Rice	plasma membrane	32.78	67.33
TraesCS7A01G391000.1	Wheat	plasma membrane	67.78	67.22
KRH09795	Soybean	endoplasmic reticulum	70.49	67.13
TraesCS2A01G483300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	67.5	67.08
TraesCSU01G097600.2	Wheat	plasma membrane	67.64	67.08
Os01t0609200-00	Rice	plasma membrane	68.19	67.08
GSMUA_Achr9P01490_001	Banana	plasma membrane	69.51	67.05
Zm00001d044443_P001	Maize	cytosol, mitochondrion, nucleus, plasma membrane	67.22	66.85
TraesCS3A01G272800.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.53	66.53
Zm00001d011319_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	67.57	66.51
HORVU3Hr1G053380.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	68.06	66.44
HORVU3Hr1G071470.1	Barley	cytosol, mitochondrion, nucleus, plasma membrane	66.39	66.39
TraesCS3D01G272200.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.32	66.32
KRH47220	Soybean	plasma membrane	43.75	66.25
KXG32860	Sorghum	plasma membrane	67.15	66.1
EER98908	Sorghum	cytosol, nucleus, plasma membrane	67.01	66.05
Os01t0609000-00	Rice	plasma membrane	67.15	65.87
Solyc02g055530.2.1	Tomato	extracellular	2.64	65.52
TraesCS5D01G190600.1	Wheat	cytosol, nucleus, plasma membrane	65.62	65.26
HORVU5Hr1G056280.6	Barley	cytosol, nucleus, plasma membrane	65.42	64.97
TraesCS5B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	65.28	64.92
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.25	64.63
TraesCS5A01G185500.1	Wheat	cytosol, nucleus, plasma membrane	62.64	64.61
TraesCS3B01G523700.1	Wheat	mitochondrion	47.92	64.49
TraesCS3B01G524400.1	Wheat	cytosol, peroxisome, plasma membrane	64.38	64.46
EER98758	Sorghum	cytosol, nucleus, plasma membrane	64.65	64.25
TraesCS3D01G474700.1	Wheat	cytosol, nucleus, plasma membrane	64.44	64.22
TraesCS3A01G479800.1	Wheat	cytosol, nucleus, plasma membrane	64.44	64.22
HORVU3Hr1G105140.4	Barley	cytosol, peroxisome, plasma membrane	64.24	63.97
Zm00001d044442_P036	Maize	plasma membrane	69.72	63.79
TraesCS2B01G149900.1	Wheat	cytosol, peroxisome, plasma membrane	55.0	63.77
TraesCS2D01G130000.1	Wheat	cytosol, peroxisome, plasma membrane	62.57	62.96
KXG20401	Sorghum	plasma membrane	63.06	62.62
Os09t0333000-00	Rice	plasma membrane	34.65	61.45
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	68.06	60.83
Solyc05g018510.2.1	Tomato	cytosol, peroxisome, plasma membrane	59.72	60.52
Solyc11g007300.1.1	Tomato	plastid	60.9	59.9
Solyc11g007280.1.1	Tomato	plastid	60.9	59.74
Solyc11g067000.1.1	Tomato	extracellular, plastid	59.93	58.99
Solyc05g055330.2.1	Tomato	plastid	60.35	58.8
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	34.17	58.78
TraesCS2A01G127800.1	Wheat	cytosol, peroxisome, plasma membrane	32.08	58.7
Os09t0332300-00	Rice	plasma membrane	33.47	58.35
Solyc06g065670.2.1	Tomato	plasma membrane	56.25	57.53
Solyc03g120980.2.1	Tomato	plastid	59.44	57.07
TraesCS6D01G094800.1	Wheat	plasma membrane	36.11	56.16
TraesCS6A01G107100.1	Wheat	mitochondrion, plasma membrane	48.96	56.04
Solyc02g081870.2.1	Tomato	unclear	51.94	53.39
Solyc01g101070.2.1	Tomato	plastid	53.4	53.14
Os01t0516900-00	Rice	plasma membrane	25.83	52.99
Solyc06g076930.1.1	Tomato	nucleus	51.81	52.35

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	UniProt:K4CWJ2	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005
PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF444
SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc09g091660.2	EnsemblPlants:Solyc09g091660.2.1	TMHMM:TMhelix	UniParc:UPI000276B5B1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr9:+:70907293..70915784

Molecular Weight (calculated)

162605.0 Da

IEP (calculated)

7.170

GRAVY (calculated)

0.054

Length

1440 amino acids

Sequence
(BLAST)

0001: MEPANLGNLR GSSLRGSISG SRRGSVSLRA NSNSIWRNTG VEIFSRSARD EDDEEALKWA ALEKLPTFDR LRKGLLFGSQ GAAAEIDIDD IGLQERKNLL
0101: ERLVRVADED NEKFLLKLKN RIDRVGIDLP TIEVRYENLN IEADAYVGSR GLPTFINFMT NFLETLLNTL HILPSSKRQI TILKDISGII KPCRMTLLLG
0201: PPSSGKTTLL LALAGKLDSS LKVTGKVSYN GHELHEFVPQ RTAAYISQHD LHIGEMTVRE TLEFSARCQG VGSRYEMLAE LSRREKAANI KPDPDIDIYM
0301: KASATEGQEA NVVTDYVLKI LGLDICADTM VGDEMLRGIS GGQKKRVTTG EMLVGPSKAL FMDEISTGLD SSTTYSIVNS LRQSVQILKG TAVISLLQPA
0401: PETYNLFDDI ILISDGYIVY QGPRDDVLQF FESMGFKCPE RKGVADFLQE VTSKKDQPQY WSRRNEHYRF ISSKEFSDAY QSFHVGRKLG DELAIPFDRT
0501: KCHPAALTNE KYGIGKKELL KVCTEREYLL MKRNSFVYVF KFFQLTIMAL MTMTLFFRTE MPRDTVDDGG IYAGALFFVV VMIMFNGMSE MAMTIFKLPV
0601: FYKQRDLLFF PSWAYAIPSW ILKIPVTLVE VGLWVILTYY VIGFDPNITR FLKQFMLLVL VNQMASGLFR FMGAVGRTMG VASTFGAFAL LLQFALCGFV
0701: LSREDVKGWW IWGYWISPLM YSVNSILVNE FDGSKWKHIA PNGTEPLGVA VVKSRGFFPD AYWYWIGFAA LFGFTVVFNF FYSLSLAYLK PYGKSQTVRP
0801: EDSGNAENGQ AASQMTSTDG GDIVSAGQSK KKGMVLPFEP HSITFDDVVY SVDMPQEMKE QGAGEDRLVL LKGVSGAFRP GVLTALMGVS GAGKTTLMDV
0901: LAGRKTGGYI DGDIKISGYP KKQETFARIS GYCEQNDIHS PYVTVYESLV YSAWLRLPKD VDEKTRKMFV DEVMELVELE PLRSALVGLP GVNGLSTEQR
1001: KRLTIAVELV ANPSIIFMDE PTSGLDARAA AIVMRTVRNT VDTGRTVVCT IHQPSIDIFE AFDELFLMKR GGQEIYVGPL GRHSCHLIKY FESIPGVAKI
1101: KEGYNPATWM LEVTASAQEM MLGVDFTDLY KNSDLYRRNK ALITELSVPR PGSKDLYFET QYSQSIWIQC MACLWKQNWS YWRNPAYTAV RFIFTMFIAL
1201: VFGTMFWDIG TKVSQSQDLF NAMGSMYAAV LFLGVQNASS VQPVVDVERT VFYRERAAGM YSAIPYAFGQ VFIEIPYVFV QAIVYGIIVY AMIGFEWEAG
1301: KFFWYLFIMF TTLLYFTFYG MMSVAVTPNQ NVASIVAAFF YAIWNLFSGF IVPRPRMPIW WRWYYWCCPV AWTLYGLVAS QFGDIQSRLT DEETVEQFLR
1401: RYFGFRHDFL PVVAGVLVAY VVVFAFTFAF AIKAFNFQRR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.