Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • plasma membrane 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G248500.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 96.75 98.48
TraesCS3D01G234300.2 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 96.68 98.41
TraesCS3A01G218000.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 96.61 98.34
EES03260 Sorghum plasma membrane 77.42 89.22
Zm00001d011319_P003 Maize cytosol, mitochondrion, peroxisome, plasma membrane 87.19 87.9
Zm00001d044443_P001 Maize cytosol, mitochondrion, nucleus, plasma membrane 86.1 87.71
HORVU3Hr1G071470.1 Barley cytosol, mitochondrion, nucleus, plasma membrane 81.29 83.26
GSMUA_Achr1P14530_001 Banana mitochondrion, plasma membrane 59.73 77.21
HORVU3Hr1G053350.8 Barley vacuole 73.15 74.06
GSMUA_Achr9P02950_001 Banana plasma membrane 68.88 73.15
GSMUA_Achr6P34530_001 Banana plasma membrane 65.36 73.09
PGSC0003DMT400005785 Potato cytosol, peroxisome, plasma membrane 30.85 72.8
VIT_09s0002g05370.t01 Wine grape mitochondrion, plasma membrane 68.27 70.87
Solyc12g019640.1.1 Tomato plasma membrane 29.02 70.39
HORVU7Hr1G092510.2 Barley plasma membrane 68.27 69.88
KRH23522 Soybean mitochondrion 67.12 69.42
VIT_09s0002g05560.t01 Wine grape plasma membrane 68.27 69.26
HORVU7Hr1G092380.8 Barley cytosol 67.73 69.04
KRH09797 Soybean endoplasmic reticulum 66.64 68.89
VIT_04s0008g04790.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 67.05 68.87
KRH47506 Soybean endoplasmic reticulum 66.17 68.44
PGSC0003DMT400043433 Potato endoplasmic reticulum, plasma membrane 7.05 68.42
PGSC0003DMT400076208 Potato plastid 66.64 68.26
Solyc08g067620.2.1 Tomato nucleus 67.19 68.2
Solyc05g053590.2.1 Tomato cytosol, mitochondrion, peroxisome, plasma membrane 65.15 68.06
Solyc09g091660.2.1 Tomato plastid 66.44 68.06
KRH52503 Soybean cytosol, peroxisome, plasma membrane 66.78 68.02
PGSC0003DMT400034130 Potato cytosol, mitochondrion, peroxisome, plasma membrane, plastid 57.36 67.95
HORVU3Hr1G105140.4 Barley cytosol, peroxisome, plasma membrane 66.58 67.91
PGSC0003DMT400061280 Potato cytosol, nucleus, plasma membrane, plastid 66.03 67.87
Solyc12g098210.1.1 Tomato plastid 65.56 67.86
KRH61824 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 66.64 67.84
CDY36570 Canola cytosol, nucleus, plasma membrane, plastid 64.81 67.66
HORVU5Hr1G056280.6 Barley cytosol, nucleus, plasma membrane 66.51 67.66
CDY39660 Canola cytosol, nucleus, plasma membrane 64.88 67.63
Solyc12g100180.1.1 Tomato mitochondrion, nucleus, plasma membrane, plastid 65.76 67.6
Bra026124.1-P Field mustard cytosol, nucleus, plasma membrane, plastid 64.75 67.59
HORVU6Hr1G036800.21 Barley plasma membrane 65.97 67.2
AT1G15520.1 Thale cress plastid 64.54 66.9
PGSC0003DMT400076209 Potato plasma membrane 64.95 66.85
KRH16029 Soybean cytosol 65.29 66.55
KRH67471 Soybean endoplasmic reticulum 64.75 66.09
KRH05088 Soybean endoplasmic reticulum 64.61 65.86
KRG95762 Soybean mitochondrion 63.19 65.17
PGSC0003DMT400048449 Potato cytosol, peroxisome, plasma membrane 53.69 65.08
KRH09795 Soybean endoplasmic reticulum 64.61 63.03
KRH47220 Soybean plasma membrane 40.54 62.88
PGSC0003DMT400005783 Potato cytosol, peroxisome, plasma membrane 66.58 62.15
HORVU7Hr1G088630.1 Barley vacuole 51.12 58.0
HORVU3Hr1G022800.1 Barley plasma membrane 55.93 57.65
KRG95752 Soybean cytosol, peroxisome, plasma membrane 62.92 57.6
HORVU7Hr1G037750.8 Barley cytosol, plasma membrane 43.12 57.25
Solyc12g019620.1.1 Tomato cytosol, nucleus, plasma membrane 31.93 56.27
HORVU5Hr1G124650.12 Barley plasma membrane 28.81 55.99
HORVU5Hr1G106850.1 Barley cytosol 54.58 53.81
HORVU7Hr1G016870.2 Barley cytosol 49.76 52.73
HORVU7Hr1G056530.12 Barley cytosol, nucleus 47.12 51.52
HORVU3Hr1G116680.1 Barley mitochondrion, plasma membrane 44.07 51.38
HORVU4Hr1G081040.4 Barley cytosol, nucleus, plasma membrane 45.49 49.78
HORVU5Hr1G049490.3 Barley nucleus, plastid 46.37 49.07
VIT_04s0008g04840.t01 Wine grape plasma membrane 36.47 48.08
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1InterPro:ABCG_PDR_2InterPro:ABC_2_trans
InterPro:ABC_trans_NInterPro:ABC_transporter-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
EnsemblPlantsGene:HORVU3Hr1G053380EnsemblPlants:HORVU3Hr1G053380.1InterPro:IPR003439UniProt:M0WIH1InterPro:P-loop_NTPaseInterPro:PDR_assoc
PFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510PFscan:PS50893PANTHER:PTHR19241
PANTHER:PTHR19241:SF352SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI000296DC24SEG:seg
Description
No Description!
Coordinates
chrchr3H:+:392853811..392862139
Molecular Weight (calculated)
166629.0 Da
IEP (calculated)
7.294
GRAVY (calculated)
0.043
Length
1475 amino acids
Sequence
(BLAST)
0001: MDREIHRVTS LRRDSSLWRR GDDVFSRTSS RFQEEEDDEE ALRWAALERL PTYDRVRRGI LTVEDGGEKV EVDVGRLGAH ESRALIERLV RAADDDHENF
0101: LLKLKERMDR VGIDYPTIEV RFEKLEIEAE VRVGNRGLPT LINAVTNTLE AVGNALHVIP SRKQAMTVLH DVSGIIKPRR MTLLLGPPGS GKTTLLLAMA
0201: GKLDKDLKVS GKVTYNGHGM DEFVPQRTAA YISQHDLHIG EMTVRETLAF SARCQGVGTR YEMLTELARR EKAANIKPDH DIDVYMKASA MGGQESSIVT
0301: EYILKILGLD ICADTLVGNE MLRGISGGQR KRVTTGEMLV GPAKALFMDE ISTGLDSSTT YQIVNSLRQT IHILGGTAVI SLLQPAPETY NLFDDILLLS
0401: DGQVVYQGPR ENVLEFFEFM GFKCPGRKGV ADFLQEVTSK KDQEQYWYRG DRPYRFVPVK QFADAFRSFH VGRSIENELK VPFDRTRSHP AALATSKFGV
0501: SRMELLKATI DRELLLMKRN AFMYIFKAVN LTLMAFIVMT TFFRTNMHRN VEYGTIYLGA LFFALDTIMF NGFAELAMTV MKLPVFFKQR DLLFFPAWAY
0601: TIPSWILQIP ITFVEVGVYV FTTYYVIGFD PSVSRFFKQY LLLLAINQMS SSLFRFIAGI GRDMVVSHTF GPLSLLAFAA LGGFILARPD IKKWWIWGYW
0701: ISPLSYAQNA ISTNEFLGPS WNQIVAGTNQ TIGVTVLKNR GIFTEAKWYW IGLGAMVGYT LLFNLLYTVA LSVLSPLTDS HPSMSEEELE EKHANLTGKA
0801: LEGHKEKNSR KQELELAHIS NRNSAISGAD SSGSRKGLVL PFTPLSLTFN DTKYSVDMPE AMKAQGVTED RLLLLKGVSG SFRPGVLTAL MGVSGAGKTT
0901: LMDVLAGRKT GGYIEGEITV SGYPKKQETF ARISGYCEQN DIHSPHVTIY ESLVFSAWLR LPAEVSSERR KMFIEEIMDL VELTSLRGAL VGLPGVNGLS
1001: TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRT VRNTVNTGRT VVCTIHQPSI DIFEAFDEVV IHYSLFQLSC LALLRSYIDY VWLQLFLMKR
1101: GGEEIYVGPV GQNSANLIEY FEEIEGISKI KDGYNPATWM LEVSSSAQEE MLGIDFAEVY RQSELYQRNK ELIKELSVPP PGSRDLNFPT QYSRSFVTQC
1201: LACLWKQKLS YWRNPSYTAV RLLFTIVIAL MFGTMFWDLG SKTRRSQDLF NAMGSMYAAV LYIGVQNSGS VQPVVVVERT VFYRERAAGM YSAFPYAFGQ
1301: VAIEFPYVMV QALIYGGLVY SMIGFEWTVA KFLWYLFFMY FTMLYFTFYG MMAVGLTPNE SIAAIISSAF YNVWNLFSGY LIPRPKLPIW WRWYSWICPV
1401: AWTLYGLVAS QFGDIQHPLD QGVPGQQITV AQFVTDYFGF HHDFLWVVAV VHVAFTVLFA FLFSFAIMRF NFQKR
Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.