Factsheet for Zm00001d044443_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03260	Sorghum	plasma membrane	84.25	95.31
Zm00001d011319_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	95.37	94.4
TraesCS3A01G218000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	87.71	87.65
TraesCS3B01G248500.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	87.64	87.58
TraesCS3D01G234300.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	87.5	87.44
TraesCS2A01G483300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	86.67	86.61
HORVU3Hr1G053380.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	87.71	86.1
Os01t0342750-01	Rice	plasma membrane	40.33	83.31
HORVU3Hr1G071470.1	Barley	cytosol, mitochondrion, nucleus, plasma membrane	81.84	82.29
TraesCS3A01G272800.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	81.7	82.15
TraesCS3D01G272200.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	81.08	81.53
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	81.15	79.61
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	60.98	77.39
GSMUA_Achr9P02950_001	Banana	plasma membrane	71.06	74.08
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	31.77	73.6
Zm00001d011315_P002	Maize	plasma membrane	73.0	73.2
GSMUA_Achr6P34530_001	Banana	plasma membrane	66.02	72.48
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	69.68	71.01
Solyc12g019640.1.1	Tomato	plasma membrane	29.49	70.23
VIT_09s0002g05560.t01	Wine grape	plasma membrane	69.61	69.33
KRH23522	Soybean	mitochondrion	67.96	69.0
KRH09797	Soybean	endoplasmic reticulum	67.4	68.4
Solyc08g067620.2.1	Tomato	nucleus	68.23	68.0
Zm00001d053612_P003	Maize	mitochondrion, plasma membrane	67.75	67.98
KRH47506	Soybean	endoplasmic reticulum	66.85	67.88
Zm00001d044442_P036	Maize	plasma membrane	73.76	67.85
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	7.11	67.76
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	58.22	67.71
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	65.88	67.56
Solyc12g098210.1.1	Tomato	plastid	66.44	67.51
KRH52503	Soybean	cytosol, peroxisome, plasma membrane	67.47	67.47
PGSC0003DMT400076208	Potato	plastid	67.06	67.43
VIT_04s0008g04790.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	66.85	67.41
Solyc09g091660.2.1	Tomato	plastid	66.85	67.22
CDY39660	Canola	cytosol, nucleus, plasma membrane	65.54	67.07
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	65.4	67.02
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	65.4	67.02
KRH61824	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	67.06	67.01
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	66.3	66.9
PGSC0003DMT400076209	Potato	plasma membrane	66.16	66.85
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	66.09	66.69
AT1G15520.1	Thale cress	plastid	65.19	66.34
KRH16029	Soybean	cytosol	65.75	65.79
KRH05088	Soybean	endoplasmic reticulum	65.47	65.51
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	54.9	65.32
KRH67471	Soybean	endoplasmic reticulum	65.12	65.26
Zm00001d048860_P001	Maize	cytosol, nucleus, plasma membrane	64.64	64.73
KRG95762	Soybean	mitochondrion	63.74	64.55
KRH09795	Soybean	endoplasmic reticulum	66.3	63.49
KRH47220	Soybean	plasma membrane	41.16	62.67
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	67.54	61.9
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	63.4	56.98
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	32.39	56.03
Zm00001d025012_P003	Maize	plastid	56.49	55.68
Zm00001d021647_P003	Maize	plastid	55.59	55.67
Zm00001d009037_P003	Maize	plastid	55.94	55.29
Zm00001d036986_P002	Maize	plasma membrane	56.84	54.58
Zm00001d039631_P002	Maize	plasma membrane	56.22	54.48
Zm00001d034940_P003	Maize	plastid	55.8	54.23
Zm00001d046277_P002	Maize	cytosol, nucleus, plasma membrane	57.32	53.9
Zm00001d043598_P003	Maize	cytosol, nucleus, plasma membrane	54.07	52.62
Zm00001d003354_P002	Maize	cytosol, peroxisome, plasma membrane	50.48	51.01
Zm00001d052726_P008	Maize	cytosol, nucleus, plasma membrane	46.75	49.45
Zm00001d031724_P003	Maize	plasma membrane	47.51	49.28
Zm00001d019961_P001	Maize	plasma membrane	35.84	49.15
VIT_04s0008g04840.t01	Wine grape	plasma membrane	37.36	48.35
Zm00001d023392_P002	Maize	cytosol, peroxisome, plasma membrane	48.9	48.1

Protein Annotations

EntrezGene:103651594	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1D6NLW8	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1
InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	ProteinID:ONM41203.1	InterPro:P-loop_NTPase
InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF352	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004DE8D7C
EnsemblPlantsGene:Zm00001d044443	EnsemblPlants:Zm00001d044443_P001	EnsemblPlants:Zm00001d044443_T001	SEG:seg	:	:

Description

ABC transporter G family member 40

Coordinates

chr3:-:228235045..228243424

Molecular Weight (calculated)

163525.0 Da

IEP (calculated)

7.345

GRAVY (calculated)

-0.003

Length

1448 amino acids

Sequence
(BLAST)

0001: MDREIHRVTS LRRDSSLWRR GDDVFSRQSS RFQDDEEDDD EALRWAALER LPTYDRVRRG ILALHEGGGG EKVEVDVGRL GARESRALVE RLVRAADDDH
0101: ERFLLKLRER MDRVGIDYPT IEVRYESLHV EAQVHVGDRG LPTLVNSVTN TVESIGNALH ILPSRKRPMT VLHDVSGIVK PRRMTLLLGP PGSGKTTLLL
0201: ALAGKLDKDL RVSGKVTYNG HGMNEFVPER TAAYISQHDL HIGEMTVRET LAFSARCQGV GTRYEMLTEL ARREKAANIK PDHDIDVYMK ASAMGGQESS
0301: IVTDYTLKIL GLEVCADTLV GNEMMRGISG GQRKRVTTGE MLVGPARALF MDEISTGLDS STTYQIVNSL RQTIHILGGT AVISLLQPAP ETYNLFDDII
0401: LLSDGHVVYQ GPREHVLEFF EFMGFRCPAR KGVADFLQEV TSRKDQGQYW YRQDRPYRFV PVKKFADAFS IFHVGRSTQN ELSEPFDRTR SHPAALATSK
0501: FGASRMELLK ATIDRELLLM KRNAFMYIFK AVNLTVMSFI VMTTFFRTNM KRDASYGNIY MGALFFALDT IMFNGFAELA MTVMKLPVFF KQRDLFFFPA
0601: WAYTIPSWIV QIPITFLEVG VYVFTTYYVI GFDPNVFRFL KQYLLLLALN QMSSALFRFI AGIGRDMVVS HTFGPLALLA FQALGGFILA RPDVKKWWIW
0701: GYWISPLSYA QNAISTNEFL GHSWSKIQNG TTVGIGVLQS RGVFTEAKWY WIGLGVLVGY ALLFNLLYTV ALAVLSPFTD SHGSMSEEEL KEKHANLTGE
0801: VIEVRKEKTS RRQELELSHS VGQNSVHSSE DSSQNRKGMA LPFPPLSLTF NDIRYSVDMP EAMKAQGVTE DRLLLLKGVS GSFRPGVLTA LMGVSGAGKT
0901: TLMDVLAGRK TGGYIEGDIT ISGYPKKQET FARISGYCEQ NDIHSPHVTV YESLLFSAWL RLPSGINLET RKMFIEEVMD LVELTSLRGA LVGLPGVSGL
1001: STEQRKRLTI AVELVANPSI IFMDEPTSGL DARAAAIVMR TVRNTVNTGR TVVCTIHQPS IDIFEAFDEL FLMKRGGEEI YVGPVGQNSS KLIEYFEGIE
1101: GISQIKDGYN PATWMLEVSS SSQEEILGVD FSEIYRQSEL YQRNKALIEE LSTPPPGSSD LNFPTQYSRS FFTQCLACFW KQKKSYWRNP TYTAVRLLFT
1201: VVIALMFGTM FWDLGRKTNK QQDLFNAMGS MYAAVVYIGM QNSGSVQPVV VVERTVFYRE RAAGMYSAFP YAFGQVAIEI PYIFVQTLLY GVLVYSMIGF
1301: EWTVAKFLWY LFFMYFTLLY FTFYGMMAVG LTPNETIAVI TSSAFYNVWN LFSGYLIPRP KLPVWWRWYS WICPVAWTLY GLVASQFGDI AHPLEDSPTG
1401: QTVAQFITDY FGFHHDFLWV VAGVHVGLTV LFAFLFSFAI MKFNFQNR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.