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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, nucleus, cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 2
  • plasma membrane 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G272800.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 98.4 98.4
TraesCS3B01G306400.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 98.26 95.87
HORVU3Hr1G071470.1 Barley cytosol, mitochondrion, nucleus, plasma membrane 95.42 95.42
Os01t0342750-01 Rice plasma membrane 41.6 85.45
EES03260 Sorghum plasma membrane 73.26 82.42
TraesCS3D01G234300.2 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 82.64 82.13
Zm00001d044443_P001 Maize cytosol, mitochondrion, nucleus, plasma membrane 81.53 81.08
Zm00001d011319_P003 Maize cytosol, mitochondrion, peroxisome, plasma membrane 82.01 80.72
GSMUA_Achr1P14530_001 Banana mitochondrion, plasma membrane 59.51 75.11
GSMUA_Achr9P02950_001 Banana plasma membrane 69.65 72.21
PGSC0003DMT400005785 Potato cytosol, peroxisome, plasma membrane 31.18 71.84
TraesCS3D01G234400.1 Wheat plasma membrane 72.01 71.32
Solyc12g019640.1.1 Tomato plasma membrane 29.86 70.72
GSMUA_Achr6P34530_001 Banana plasma membrane 64.31 70.2
VIT_09s0002g05370.t01 Wine grape mitochondrion, plasma membrane 68.12 69.04
TraesCS7D01G386600.1 Wheat plasma membrane 68.4 68.17
KRH23522 Soybean mitochondrion 66.67 67.32
TraesCS7D01G386500.1 Wheat plasma membrane 67.57 67.01
PGSC0003DMT400034130 Potato cytosol, mitochondrion, peroxisome, plasma membrane, plastid 57.92 66.99
KRH47506 Soybean endoplasmic reticulum 66.32 66.97
Solyc08g067620.2.1 Tomato nucleus 67.5 66.9
TraesCS5D01G190600.1 Wheat cytosol, nucleus, plasma membrane 67.22 66.85
VIT_09s0002g05560.t01 Wine grape plasma membrane 67.43 66.78
Bra026124.1-P Field mustard cytosol, nucleus, plasma membrane, plastid 65.49 66.74
CDY36570 Canola cytosol, nucleus, plasma membrane, plastid 65.49 66.74
Solyc12g098210.1.1 Tomato plastid 66.04 66.74
KRH09797 Soybean endoplasmic reticulum 66.04 66.64
CDY39660 Canola cytosol, nucleus, plasma membrane 65.42 66.57
Solyc05g053590.2.1 Tomato cytosol, mitochondrion, peroxisome, plasma membrane 65.28 66.57
PGSC0003DMT400076208 Potato plastid 66.46 66.46
KRH52503 Soybean cytosol, peroxisome, plasma membrane 66.81 66.44
Solyc09g091660.2.1 Tomato plastid 66.32 66.32
PGSC0003DMT400076209 Potato plasma membrane 65.9 66.22
KRH61824 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 66.53 66.11
PGSC0003DMT400061280 Potato cytosol, nucleus, plasma membrane, plastid 65.83 66.06
TraesCS3D01G474700.1 Wheat cytosol, nucleus, plasma membrane 66.18 65.95
VIT_04s0008g04790.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 65.62 65.81
AT1G15520.1 Thale cress plastid 64.86 65.64
Solyc12g100180.1.1 Tomato mitochondrion, nucleus, plasma membrane, plastid 65.14 65.37
PGSC0003DMT400043433 Potato endoplasmic reticulum, plasma membrane 6.88 65.13
TraesCS6D01G166100.1 Wheat plasma membrane 65.35 64.99
PGSC0003DMT400048449 Potato cytosol, peroxisome, plasma membrane 54.86 64.91
KRH16029 Soybean cytosol 65.14 64.82
TraesCS2D01G130000.1 Wheat cytosol, peroxisome, plasma membrane 64.31 64.71
KRH67471 Soybean endoplasmic reticulum 64.72 64.5
KRG95762 Soybean mitochondrion 63.89 64.34
KRH05088 Soybean endoplasmic reticulum 64.51 64.2
KRH47220 Soybean plasma membrane 41.04 62.15
KRH09795 Soybean endoplasmic reticulum 65.07 61.97
PGSC0003DMT400005783 Potato cytosol, peroxisome, plasma membrane 66.32 60.44
TraesCS6D01G094800.1 Wheat plasma membrane 38.54 59.94
KRG95752 Soybean cytosol, peroxisome, plasma membrane 62.99 56.3
TraesCS5D01G023400.1 Wheat plasma membrane 32.29 56.09
TraesCS3D01G124400.2 Wheat plasma membrane 57.08 56.07
Solyc12g019620.1.1 Tomato cytosol, nucleus, plasma membrane 32.57 56.03
TraesCS5D01G452500.1 Wheat plastid 56.04 55.62
TraesCS5D01G564000.1 Wheat plastid 55.97 55.4
TraesCS7D01G185700.2 Wheat plasma membrane 50.62 55.27
TraesCS2D01G051800.1 Wheat plasma membrane 52.85 54.36
TraesCS7D01G069500.1 Wheat cytosol, peroxisome, plasma membrane 50.69 52.07
TraesCS7D01G269400.1 Wheat cytosol, nucleus, plasma membrane 47.71 50.89
TraesCS5D01G163500.1 Wheat plasma membrane 50.69 50.17
TraesCS7D01G465900.2 Wheat cytosol, peroxisome, plasma membrane 48.19 49.89
TraesCS5D01G163700.1 Wheat cytosol, peroxisome, plasma membrane 49.93 49.42
TraesCS7D01G100700.1 Wheat plasma membrane 43.33 47.27
VIT_04s0008g04840.t01 Wine grape plasma membrane 36.39 46.83
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1InterPro:ABCG_PDR_2InterPro:ABC_2_trans
InterPro:ABC_trans_NInterPro:ABC_transporter-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787GO:GO:0016887InterPro:IPR003439
InterPro:P-loop_NTPaseInterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510
PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF264SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3D01G272200EnsemblPlants:TraesCS3D01G272200.2TIGR:cd03232TIGR:cd03233SEG:seg:
Description
No Description!
Coordinates
chr3D:-:377883136..377894725
Molecular Weight (calculated)
162968.0 Da
IEP (calculated)
6.994
GRAVY (calculated)
0.028
Length
1440 amino acids
Sequence
(BLAST)
0001: MSREIHKIAS LRRDSWRSSD DVFSRSSSRF QDEEDDEEAL RWAALERLPT YDRVRRGILL AETGEKIDVD VGRLGARESR ALIDRLVRAA DDDHERFLLK
0101: LKDRMDRVGI DYPTIEVRFE KLEVEAEVLV GNRALPTLVN SVRNTLEAIG HALHIFPRRK HSMTILHDVS GIIKPRRMTL LLGPPGSGKT TLLLALAGKL
0201: DKELKVSGKV SYNGYEMNEF VPERTAAYIS QHDLHTGEMT VRETLAFSAR CQGVGSRYEM LTELARRENT ENIKPDNDID VYMKASAMGG QEYNVVTEYI
0301: LKVLGLDICA DTVVGNDMLR GISGGQRKRV TTGEMLVGPA RALFMDEIST GLDSSTTYQI VNSIRQTIHV LGGTAVISLL QPAPETYDLF DDIILLSDGY
0401: VVYQGAREHV LEFFESMGFR CPQRKGVADF LQEVTSRKDQ EQYWYRSDMP YHFVPVKQFA DSFHSFHMGQ FVHNELLEPF DRTKSHPAAL ATSKFGVSRI
0501: ELLKATMDRE FLLMKRNSFY FICKAAQLCL MAFLAMSTFF RTNMHRDPTY GTIYMGALYF AIDAIMFNGF SELGMTATKL PVFFKQRDLL FFPAWAYTIP
0601: AWILQIPITF FEVGVYVFTT YYVIGFDPSI SRLFKQYMLL LALNQMSSSL FRFIAGLGRD MVVSSTFGPL ALASFTILGG FILARPDVKK WWIWGYWVSP
0701: LSYAQNAIST NEFLGHSWNK ILPGQNDTMG IMVLKSRGIF TEAKWYWIGF GAMIGYTLLF NLLYTLALSV LNPLGDTHPT MPENAIKEKH ANVTGENLED
0801: PEKKKCRKLE LSGGANQNCA TSNVGSSSRR KGMVLPFAQL SLSFNAVKYS VDMPQAMSAQ GVTDDHLVLL KGVSGSFRPG VLTALMGVSG AGKTTLMDVL
0901: AGRKTGGYIE GDITISGYPK KQETFARISG YCEQNDIHSP HVTVYESLAF SAWLRLPSEV DLVTRKMFIE EVMELVELTS LWGALVGLPG VNGLSTEQRK
1001: RLTIAVELVA NPSIIFMDEP TSGLDARAAA IVMRAVRNTV NTGRTVVCTI HQPSIDIFEA FDELFLMKRG GEEIYVGPLG HNSSKLIEYF EGIEGVSKIK
1101: DGYNPATWML EVTSIVQEEM LSVDFCEIYR RSELYQRNKE LIEELSTPHP DSSDLDFPSL YSRSFFTQCL ACLWKQKLSY WRNPSYTAMR FLFTIIIALL
1201: FGTMFWGLGQ KTKREQDLFN AVGSMYAAVL YLGIQNSGTV QPVVAVERTV FYRERAAGMY SAFPYAFGQV AIEFPYILVQ TVIYGVLVYS MIGFEWSVAK
1301: FFWYLFFMYF TLLYFTFYGM MAVGLTPNES VAAIISGAVY NAWNLFSGYL IPRPKIPVWW RWYSWICPVA WTLYGLVASQ FGDIQTKLVT KDQTVSQFIA
1401: EFYGFDRDLL WVVAVVHVAF TVAFAFMFSF AIMRFNFQRR
Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.