Factsheet for TraesCS5D01G023400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
ChloroP:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67874	Soybean	mitochondrion	43.91	58.24
TraesCS5A01G016200.1	Wheat	mitochondrion	97.83	56.52
TraesCS7D01G185700.2	Wheat	plasma membrane	84.68	53.22
TraesCS5D01G452500.1	Wheat	plastid	92.4	52.79
TraesCS5D01G564000.1	Wheat	plastid	89.02	50.72
KRH67876	Soybean	plasma membrane	47.04	50.72
KXG37059	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	80.82	47.72
Zm00001d009037_P003	Maize	plastid	80.1	45.32
Zm00001d025012_P003	Maize	plastid	80.22	45.27
Zm00001d034940_P003	Maize	plastid	80.22	44.63
CDX79673	Canola	cytosol, peroxisome, plasma membrane	63.09	42.83
TraesCS6D01G094800.1	Wheat	plasma membrane	46.2	41.36
TraesCS2D01G051800.1	Wheat	plasma membrane	69.6	41.21
KRH34743	Soybean	plasma membrane	59.71	40.98
PGSC0003DMT400050166	Potato	plastid	62.48	37.21
CDY43723	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	64.42	36.75
AT2G36380.1	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	63.93	36.48
VIT_08s0007g03710.t01	Wine grape	plastid	63.81	36.46
AT1G66950.1	Thale cress	plastid	63.45	36.18
VIT_06s0061g01490.t01	Wine grape	plastid	63.21	36.04
PGSC0003DMT400068277	Potato	cytosol	58.02	36.0
Solyc11g067000.1.1	Tomato	extracellular, plastid	63.45	35.95
Bra023065.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	61.76	35.83
PGSC0003DMT400050158	Potato	cytosol, peroxisome, plasma membrane	62.48	35.82
Solyc11g007300.1.1	Tomato	plastid	62.73	35.52
PGSC0003DMT400060396	Potato	plastid	62.48	35.05
Solyc05g055330.2.1	Tomato	plastid	62.24	34.91
Solyc11g007280.1.1	Tomato	plastid	61.76	34.88
GSMUA_Achr8P07660_001	Banana	mitochondrion, peroxisome, plasma membrane	64.9	34.78
VIT_13s0074g00680.t01	Wine grape	plastid	61.52	34.55
KRH71633	Soybean	nucleus	61.04	34.19
KRG92040	Soybean	extracellular	59.47	33.45
TraesCS6D01G166100.1	Wheat	plasma membrane	57.78	33.08
TraesCS5D01G190600.1	Wheat	cytosol, nucleus, plasma membrane	57.18	32.73
TraesCS3D01G474700.1	Wheat	cytosol, nucleus, plasma membrane	56.33	32.32
TraesCS3D01G272200.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	56.09	32.29
TraesCS3D01G234400.1	Wheat	plasma membrane	56.45	32.19
TraesCS3D01G234300.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	56.09	32.09
TraesCS7D01G386600.1	Wheat	plasma membrane	55.73	31.97
TraesCS2D01G130000.1	Wheat	cytosol, peroxisome, plasma membrane	55.01	31.87
TraesCS7D01G269400.1	Wheat	cytosol, nucleus, plasma membrane	51.87	31.85
TraesCS7D01G386500.1	Wheat	plasma membrane	55.37	31.61
CDX84561	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	61.76	31.39
TraesCS7D01G100700.1	Wheat	plasma membrane	48.01	30.15
TraesCS3D01G124400.2	Wheat	plasma membrane	52.71	29.81
TraesCS7D01G465900.2	Wheat	cytosol, peroxisome, plasma membrane	49.1	29.26
TraesCS7D01G069500.1	Wheat	cytosol, peroxisome, plasma membrane	49.1	29.03
TraesCS5D01G163500.1	Wheat	plasma membrane	50.78	28.93
TraesCS5D01G163700.1	Wheat	cytosol, peroxisome, plasma membrane	49.82	28.38
Os02t0318500-00	Rice	plasma membrane	14.23	25.82
PGSC0003DMT400060117	Potato	cytosol	31.0	25.32
Bra017241.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	64.54	23.57
Os11t0587600-01	Rice	plasma membrane	15.44	19.25
CDY65389	Canola	cytosol	0.0	0.0

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF214
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G023400	EnsemblPlants:TraesCS5D01G023400.1	TIGR:cd03232
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:18173064..18177040

Molecular Weight (calculated)

93179.6 Da

IEP (calculated)

7.535

GRAVY (calculated)

0.288

Length

829 amino acids

Sequence
(BLAST)

001: MLKELQIPFD KSKTHPAALT TSKYGQSSWE SFKTVMSREL LLMKRNSFIY IFKVTQLLIL GLVAMTVFLR TKMPYGQISD SAKFFGALTF SLITVLFNGF
101: AELQFTIKML PTFYKQRDFL FFPPWTFGLV NIISKVPVSL VESSVWVILT YYVMGFAPAA GRFFRHLLAF FLTHQMAMGL FRFLGAVLKS MVVANTLGMF
201: VILVIFIFGG FPNNDTSIAA RTVGEAILKS RGLFTGDSGF WVSIGAIVGF AILFNILYLL ALTYLSFGSS SNTVSDEENE NETNTSMPID EATNRPTRSQ
301: ITLPFQPLSL SFNHVNYYVD MPAEMREQGF AESRLQLLSD ISGAFRPGVL TALVGVSGAG ETILMDVLAG RKTSGSIEGS ITLSGYPKKQ ETFARISGYC
401: EQTDIHSPNV TVYESILYSA WLRLSSDVDE KTRKIFVEEV MTLVELDVLR NAMVGLPGVD GLSTEQRKRL TIAVELVANP SIIFMDEPTS GLDARAAAIV
501: MWAVKNTVNT GRTVVCTIHQ PSIDIFDSFD ELLLMKRGGR VIYAGELGHY SHKIVEYFEA IPGVEKITEG YNPATWMLEV SSPSAEARLN INFADIYADS
601: DLYRKNQELI KELSIPPPGY EDLSFPTKYS QNFYNQCVAN FWKQYKSYWK NPAHNAMRFL MTLIYALVFG TVFWQKGTKI NSQQDLSNLL GATYAAVFFL
701: GSANCITVQP VVAIERTVFY REKAAGMYSP LSYALAQTCV EVMYNIVQGI EYTLIIYSMI GYEWKAAKFF YFLFFIISCF NYFTLFGMML VALSSSAMLA
801: NIIIAFVLPL WNLFSGFLVT RPLIPIWWR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.