Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G149900.1 | Wheat | cytosol, peroxisome, plasma membrane | 83.02 | 95.65 |
| TraesCS2A01G127800.1 | Wheat | cytosol, peroxisome, plasma membrane | 50.31 | 91.49 |
| TraesCS5D01G190600.1 | Wheat | cytosol, nucleus, plasma membrane | 89.45 | 88.4 |
| EER98758 | Sorghum | cytosol, nucleus, plasma membrane | 82.6 | 81.57 |
| TraesCS3D01G474700.1 | Wheat | cytosol, nucleus, plasma membrane | 80.92 | 80.14 |
| Os09t0333000-00 | Rice | plasma membrane | 42.7 | 75.25 |
| GSMUA_Achr1P14530_001 | Banana | mitochondrion, plasma membrane | 57.72 | 72.39 |
| Os09t0332300-00 | Rice | plasma membrane | 40.74 | 70.58 |
| PGSC0003DMT400005785 | Potato | cytosol, peroxisome, plasma membrane | 30.19 | 69.12 |
| Solyc12g019640.1.1 | Tomato | plasma membrane | 28.58 | 67.27 |
| GSMUA_Achr9P02950_001 | Banana | plasma membrane | 65.27 | 67.24 |
| TraesCS3D01G234400.1 | Wheat | plasma membrane | 67.58 | 66.51 |
| GSMUA_Achr6P34530_001 | Banana | plasma membrane | 61.22 | 66.41 |
| TraesCS3D01G234300.2 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 65.97 | 65.15 |
| TraesCS3D01G272200.2 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 64.71 | 64.31 |
| VIT_09s0002g05370.t01 | Wine grape | mitochondrion, plasma membrane | 63.73 | 64.18 |
| VIT_04s0008g04790.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 64.22 | 64.0 |
| KRH47506 | Soybean | endoplasmic reticulum | 63.66 | 63.88 |
| TraesCS7D01G386600.1 | Wheat | plasma membrane | 64.22 | 63.6 |
| KRH52503 | Soybean | cytosol, peroxisome, plasma membrane | 64.22 | 63.47 |
| KRH61824 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 64.15 | 63.35 |
| Solyc05g053590.2.1 | Tomato | cytosol, mitochondrion, peroxisome, plasma membrane | 62.26 | 63.1 |
| KRH23522 | Soybean | mitochondrion | 62.75 | 62.97 |
| TraesCS7D01G386500.1 | Wheat | plasma membrane | 63.73 | 62.81 |
| KRH09797 | Soybean | endoplasmic reticulum | 62.54 | 62.72 |
| Solyc08g067620.2.1 | Tomato | nucleus | 63.66 | 62.7 |
| PGSC0003DMT400076208 | Potato | plastid | 63.03 | 62.64 |
| Solyc09g091660.2.1 | Tomato | plastid | 62.96 | 62.57 |
| PGSC0003DMT400034130 | Potato | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 54.3 | 62.41 |
| KRH16029 | Soybean | cytosol | 63.03 | 62.34 |
| PGSC0003DMT400048449 | Potato | cytosol, peroxisome, plasma membrane | 52.97 | 62.28 |
| Solyc12g098210.1.1 | Tomato | plastid | 61.84 | 62.11 |
| KRH05088 | Soybean | endoplasmic reticulum | 62.75 | 62.06 |
| VIT_09s0002g05560.t01 | Wine grape | plasma membrane | 62.96 | 61.97 |
| PGSC0003DMT400043433 | Potato | endoplasmic reticulum, plasma membrane | 6.57 | 61.84 |
| KRG95762 | Soybean | mitochondrion | 61.64 | 61.68 |
| CDY39660 | Canola | cytosol, nucleus, plasma membrane | 60.94 | 61.63 |
| Bra026124.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 60.8 | 61.57 |
| CDY36570 | Canola | cytosol, nucleus, plasma membrane, plastid | 60.8 | 61.57 |
| PGSC0003DMT400076209 | Potato | plasma membrane | 61.57 | 61.48 |
| PGSC0003DMT400061280 | Potato | cytosol, nucleus, plasma membrane, plastid | 61.64 | 61.46 |
| KRH67471 | Soybean | endoplasmic reticulum | 62.05 | 61.45 |
| AT1G15520.1 | Thale cress | plastid | 61.01 | 61.35 |
| Solyc12g100180.1.1 | Tomato | mitochondrion, nucleus, plasma membrane, plastid | 61.36 | 61.18 |
| TraesCS6D01G166100.1 | Wheat | plasma membrane | 61.57 | 60.84 |
| KRH47220 | Soybean | plasma membrane | 39.48 | 59.41 |
| KRH09795 | Soybean | endoplasmic reticulum | 61.5 | 58.2 |
| PGSC0003DMT400005783 | Potato | cytosol, peroxisome, plasma membrane | 63.1 | 57.15 |
| TraesCS6D01G094800.1 | Wheat | plasma membrane | 36.76 | 56.8 |
| TraesCS5D01G023400.1 | Wheat | plasma membrane | 31.87 | 55.01 |
| TraesCS7D01G185700.2 | Wheat | plasma membrane | 49.9 | 54.13 |
| TraesCS5D01G452500.1 | Wheat | plastid | 54.86 | 54.1 |
| TraesCS5D01G564000.1 | Wheat | plastid | 54.86 | 53.95 |
| TraesCS3D01G124400.2 | Wheat | plasma membrane | 54.72 | 53.41 |
| KRG95752 | Soybean | cytosol, peroxisome, plasma membrane | 59.96 | 53.26 |
| Solyc12g019620.1.1 | Tomato | cytosol, nucleus, plasma membrane | 30.68 | 52.45 |
| TraesCS2D01G051800.1 | Wheat | plasma membrane | 51.01 | 52.14 |
| TraesCS7D01G069500.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.22 | 49.22 |
| TraesCS7D01G269400.1 | Wheat | cytosol, nucleus, plasma membrane | 46.26 | 49.04 |
| TraesCS5D01G163500.1 | Wheat | plasma membrane | 49.13 | 48.32 |
| TraesCS7D01G465900.2 | Wheat | cytosol, peroxisome, plasma membrane | 45.63 | 46.94 |
| TraesCS5D01G163700.1 | Wheat | cytosol, peroxisome, plasma membrane | 47.45 | 46.67 |
| VIT_04s0008g04840.t01 | Wine grape | plasma membrane | 35.85 | 45.84 |
| TraesCS7D01G100700.1 | Wheat | plasma membrane | 41.3 | 44.77 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans |
| InterPro:ABC_trans_N | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 |
| PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF306 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS2D01G130000 | EnsemblPlants:TraesCS2D01G130000.1 | TIGR:cd03232 | TIGR:cd03233 | SEG:seg | : |
Description
No Description!
Coordinates
chr2D:+:75627310..75640507
Molecular Weight (calculated)
161475.0 Da
IEP (calculated)
7.742
GRAVY (calculated)
0.045
Length
1431 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDDPGETHAF GRSLFSRSSP DYDEEEALRW AALEKLPTYD RARTAVLAMP GEGLKEVNLE KLSAQEKHAL LQLVAWVGDD HERFLSKFKD RLDRVGIQLP
0101: TIEVRYENLN VEAQAHVGSR GLPTILNTYA NVLEGVANAL HLTPNRKQKI PILHNVSGII KPHRMTLLLG PPGAGKTSLL LALAGTLPSS LKMSGDLTYN
0201: GHTMDEFVPR RSAAYVSQHD MHMAELTVRE TVNFSAKCQG IGHRFDLLME LSRREKEEHI KPDPEIDIYM KAVATGDQKA EVVTNHILKV LGLDICADIM
0301: IGNNMLRGIS GGQKKRVTTA EMLVTPGRAL FMDEISTGLD SSTTFQIVNS IRQTIHIIGG TAVIALLQPA PETYELFDDI ILLSDGHVVY NGPRQYVLEF
0401: FEIMGFKCPK RKGVADFLQE VTSIKDQGQY WINNDETYRF VPVKEFAEAF QSFHVGQAIR SELAVPFDKD KSHPAALKKS QYGASMKELL KANINREILL
0501: MKRNSFVYIF KATQLTLLAI IAMTVFLRIN MHRDSVTDGG IYMGAIFFGI LMIMFNGFAE VGLTTVKLPI YFKQRDFLFF PAWTYSLTSW IIKTPLSLLN
0601: ATIWVGITYY GIGFDPNIQR QLLLLFLVNE AFSGLFRFVA GLARHHVIAN TIASFCMLNF MLTGGFVMAR DNVKNLWIWG YWISPLMYAQ NALSVNEFLG
0701: HSWNKTIPGF KGPLGRLVLE SRGIFPDTKW YWIGAGALLG YVLLFNILYS VCLTFLDPFD NNQPTVSEET LKIKQANLIG ELLEASSRGW VNNSTMASRD
0801: TMDGSNDKSN SNHTTMNSSP GKKGMVLHFV PLSVTFDDIK YSVDMPEEIK AQGVTERRLE LLKGVSGSFR PGVLTALMGV SGAGKTTLMD VLVGRKTSGY
0901: IEGNITISGY PKKQETFARV SGYCEQNNIH SPNVTVYESL AFSAWLRLPA NVESSTRKMF IDEVMELVEL NPLKHALVGL PGVSGLSTEQ RKRLTIAVEL
1001: VANPSIIFMD EPTSGLDARA AAIVMRAIRN TVDTGRTVVC TIHQPSIDIF ESFDELFLMK RGGEEIYVGP LGRHSCELIR YLEAIQNIRK IKDGHNPATW
1101: MLEVTSTTQE HITGINFSHV YKNSELYRRN KKLIEELSTP PEGSSDLSFP TQYSQTFITQ SFACLWKQSL SYWRNPPYTV VKYIYTIVLA LLFGTIFWGI
1201: GRKRHNQQDL FNAMGSMYST ILFMGVQNST SVQPVVAVER TIFYRESAAR MYSPLPYALG QVVIELPYIL VQSLIYGILV YAMIGFEWTV AKFFWYLFFM
1301: YFTLAYFTFY GMMTMGLTSN YNVASIASAA FYALWNLFSG FIIPRTRIPI WWRWYYWLNP IAWTLNGLVT SQFGDVIEEF DNGVRVSDFV ESYFGYHQEF
1401: LWVVANVVVL FAVLFAFLFG LSIKLFNFEK R
0101: TIEVRYENLN VEAQAHVGSR GLPTILNTYA NVLEGVANAL HLTPNRKQKI PILHNVSGII KPHRMTLLLG PPGAGKTSLL LALAGTLPSS LKMSGDLTYN
0201: GHTMDEFVPR RSAAYVSQHD MHMAELTVRE TVNFSAKCQG IGHRFDLLME LSRREKEEHI KPDPEIDIYM KAVATGDQKA EVVTNHILKV LGLDICADIM
0301: IGNNMLRGIS GGQKKRVTTA EMLVTPGRAL FMDEISTGLD SSTTFQIVNS IRQTIHIIGG TAVIALLQPA PETYELFDDI ILLSDGHVVY NGPRQYVLEF
0401: FEIMGFKCPK RKGVADFLQE VTSIKDQGQY WINNDETYRF VPVKEFAEAF QSFHVGQAIR SELAVPFDKD KSHPAALKKS QYGASMKELL KANINREILL
0501: MKRNSFVYIF KATQLTLLAI IAMTVFLRIN MHRDSVTDGG IYMGAIFFGI LMIMFNGFAE VGLTTVKLPI YFKQRDFLFF PAWTYSLTSW IIKTPLSLLN
0601: ATIWVGITYY GIGFDPNIQR QLLLLFLVNE AFSGLFRFVA GLARHHVIAN TIASFCMLNF MLTGGFVMAR DNVKNLWIWG YWISPLMYAQ NALSVNEFLG
0701: HSWNKTIPGF KGPLGRLVLE SRGIFPDTKW YWIGAGALLG YVLLFNILYS VCLTFLDPFD NNQPTVSEET LKIKQANLIG ELLEASSRGW VNNSTMASRD
0801: TMDGSNDKSN SNHTTMNSSP GKKGMVLHFV PLSVTFDDIK YSVDMPEEIK AQGVTERRLE LLKGVSGSFR PGVLTALMGV SGAGKTTLMD VLVGRKTSGY
0901: IEGNITISGY PKKQETFARV SGYCEQNNIH SPNVTVYESL AFSAWLRLPA NVESSTRKMF IDEVMELVEL NPLKHALVGL PGVSGLSTEQ RKRLTIAVEL
1001: VANPSIIFMD EPTSGLDARA AAIVMRAIRN TVDTGRTVVC TIHQPSIDIF ESFDELFLMK RGGEEIYVGP LGRHSCELIR YLEAIQNIRK IKDGHNPATW
1101: MLEVTSTTQE HITGINFSHV YKNSELYRRN KKLIEELSTP PEGSSDLSFP TQYSQTFITQ SFACLWKQSL SYWRNPPYTV VKYIYTIVLA LLFGTIFWGI
1201: GRKRHNQQDL FNAMGSMYST ILFMGVQNST SVQPVVAVER TIFYRESAAR MYSPLPYALG QVVIELPYIL VQSLIYGILV YAMIGFEWTV AKFFWYLFFM
1301: YFTLAYFTFY GMMTMGLTSN YNVASIASAA FYALWNLFSG FIIPRTRIPI WWRWYYWLNP IAWTLNGLVT SQFGDVIEEF DNGVRVSDFV ESYFGYHQEF
1401: LWVVANVVVL FAVLFAFLFG LSIKLFNFEK R
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.