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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • cytosol 2
  • plasma membrane 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G056280.6 Barley cytosol, nucleus, plasma membrane 87.16 87.1
TraesCS5B01G183500.1 Wheat cytosol, nucleus, plasma membrane 86.96 87.02
TraesCS5D01G190600.1 Wheat cytosol, nucleus, plasma membrane 86.82 86.88
TraesCS5A01G185500.1 Wheat cytosol, nucleus, plasma membrane 82.54 85.67
TraesCS3B01G523700.1 Wheat mitochondrion 62.66 84.86
TraesCS3A01G479800.1 Wheat cytosol, nucleus, plasma membrane 83.51 83.74
TraesCS3B01G524400.1 Wheat cytosol, peroxisome, plasma membrane 83.09 83.73
TraesCS3D01G474700.1 Wheat cytosol, nucleus, plasma membrane 83.3 83.53
TraesCS2B01G149900.1 Wheat cytosol, peroxisome, plasma membrane 71.08 82.93
HORVU3Hr1G105140.4 Barley cytosol, peroxisome, plasma membrane 82.68 82.85
TraesCS2D01G130000.1 Wheat cytosol, peroxisome, plasma membrane 81.57 82.6
TraesCS2A01G127800.1 Wheat cytosol, peroxisome, plasma membrane 42.93 79.03
Os09t0333000-00 Rice plasma membrane 43.96 78.45
GSMUA_Achr1P14530_001 Banana mitochondrion, plasma membrane 59.7 75.81
Os09t0332300-00 Rice plasma membrane 42.44 74.46
EES03260 Sorghum plasma membrane 62.66 70.94
PGSC0003DMT400005785 Potato cytosol, peroxisome, plasma membrane 30.5 70.72
GSMUA_Achr9P02950_001 Banana plasma membrane 67.08 69.98
Solyc12g019640.1.1 Tomato plasma membrane 29.19 69.57
GSMUA_Achr6P34530_001 Banana plasma membrane 62.73 68.92
KXG32863 Sorghum cytosol, peroxisome, plasma membrane 68.39 68.3
KXG32865 Sorghum plasma membrane 68.25 67.83
VIT_09s0002g05370.t01 Wine grape mitochondrion, plasma membrane 66.18 67.49
EES03255 Sorghum cytosol, peroxisome, plasma membrane, plastid 67.43 66.78
KRH47506 Soybean endoplasmic reticulum 65.22 66.27
EER98908 Sorghum cytosol, nucleus, plasma membrane 66.67 66.12
VIT_04s0008g04790.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 65.49 66.09
KRH23522 Soybean mitochondrion 64.73 65.78
KRH09797 Soybean endoplasmic reticulum 64.73 65.73
PGSC0003DMT400034130 Potato cytosol, mitochondrion, peroxisome, plasma membrane, plastid 56.45 65.7
VIT_09s0002g05560.t01 Wine grape plasma membrane 65.63 65.41
Solyc08g067620.2.1 Tomato nucleus 65.49 65.31
Solyc05g053590.2.1 Tomato cytosol, mitochondrion, peroxisome, plasma membrane 63.63 65.3
KXG32860 Sorghum plasma membrane 65.91 65.28
KRH52503 Soybean cytosol, peroxisome, plasma membrane 65.01 65.06
KRH61824 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 64.94 64.94
EES04729 Sorghum mitochondrion 64.6 64.91
KXG20401 Sorghum plasma membrane 64.8 64.76
Solyc09g091660.2.1 Tomato plastid 64.25 64.65
PGSC0003DMT400076208 Potato plastid 64.11 64.51
PGSC0003DMT400076209 Potato plasma membrane 63.7 64.41
PGSC0003DMT400061280 Potato cytosol, nucleus, plasma membrane, plastid 63.63 64.25
Solyc12g098210.1.1 Tomato plastid 63.01 64.07
PGSC0003DMT400048449 Potato cytosol, peroxisome, plasma membrane 53.76 64.01
Solyc12g100180.1.1 Tomato mitochondrion, nucleus, plasma membrane, plastid 63.35 63.97
CDY39660 Canola cytosol, nucleus, plasma membrane 62.11 63.6
KRH67471 Soybean endoplasmic reticulum 63.35 63.53
KRH47220 Soybean plasma membrane 41.68 63.51
Bra026124.1-P Field mustard cytosol, nucleus, plasma membrane, plastid 61.9 63.48
CDY36570 Canola cytosol, nucleus, plasma membrane, plastid 61.9 63.48
KRH16029 Soybean cytosol 63.28 63.37
AT1G15520.1 Thale cress plastid 62.11 63.25
KRH05088 Soybean endoplasmic reticulum 63.01 63.1
KRG95762 Soybean mitochondrion 62.11 62.94
EES08826 Sorghum mitochondrion 61.42 62.02
KRH09795 Soybean endoplasmic reticulum 62.73 60.12
PGSC0003DMT400005783 Potato cytosol, peroxisome, plasma membrane 64.73 59.37
PGSC0003DMT400043433 Potato endoplasmic reticulum, plasma membrane 6.0 57.24
EES00201 Sorghum plasma membrane 56.31 57.22
OQU76555 Sorghum mitochondrion, plasma membrane 50.17 56.23
KXG37059 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 54.24 55.98
KRG95752 Soybean cytosol, peroxisome, plasma membrane 61.97 55.74
KXG36359 Sorghum plastid 54.8 54.5
Solyc12g019620.1.1 Tomato cytosol, nucleus, plasma membrane 31.12 53.88
OQU81756 Sorghum plasma membrane 45.89 52.9
EES01392 Sorghum cytosol, peroxisome, plasma membrane 53.07 51.92
OQU80771 Sorghum plasma membrane 41.68 51.45
VIT_04s0008g04840.t01 Wine grape plasma membrane 36.3 47.01
OQU89274 Sorghum plasma membrane 31.68 46.84
OQU91497 Sorghum cytosol, nucleus, plasma membrane 43.62 45.76
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:8054577InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1InterPro:ABCG_PDR_2
InterPro:ABC_2_transInterPro:ABC_trans_NInterPro:ABC_transporter-likeUniProt:C5X9X6EnsemblPlants:EER98758ProteinID:EER98758
ProteinID:EER98758.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439InterPro:P-loop_NTPaseInterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370
PFAM:PF14510PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF306SMART:SM00382EnsemblPlantsGene:SORBI_3002G174000
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0001A83DD5RefSeq:XP_002462237.1SEG:seg:
Description
hypothetical protein
Coordinates
chr2:-:55028500..55037901
Molecular Weight (calculated)
162579.0 Da
IEP (calculated)
6.852
GRAVY (calculated)
0.051
Length
1449 amino acids
Sequence
(BLAST)
0001: MDDAGEIHAL GSLRRDGSVW SAASNVFSSL SSAGSGGGGD DDEEALRWAA LEKLPTYDRA RTAVLAMPEG DLRQVNVQKL DPQERHALLQ RLAWVGDDHQ
0101: RFLSKFKDRV DRVRIELPKI EVRYQNLNVE AEAYVGSRGL PTIFNTYANV LEGIANALHI TPSRKQKISI LHNVSGIIKP HRMTLLLGPP GAGKTSLLLA
0201: LAGTLPPSLE VTGNITYNGH TMDEFEARRS AAYVSQHDLH MGELTVRETV NFSARCQGSG HRYDLLVELS RREKDAGIIP DKETDTYMKA AATGEQKADV
0301: VTNHILKVLG LDICADTIVG NNMLRGISGG QKKRVTTAEM LVTPGRALFM DEISTGLDSS TTFQIVNSIR QTIHIVGGTA VIALLQPAPE TYELFDDIIL
0401: LSDGQVVYNG PREYVLEFFE SVGFKCPQRK GVADFLQEVT SKKDQRQYWK HGDDTYRYVP VKEFAEAFQS FHVGEAIRNE LAVPFDKSTS HPAALKTSKY
0501: GASVRELLKA NIDREILLMK RNSFVYIFKA VQLTLMALIT MTVFLRTNMH RDSVTDGRIY MGALFFGILM IMFNGLAEVG LTIAKLPVFF KQRDLLFYPA
0601: WTYSLPSWII KTPLSLLNVT IWVFITYYVI GFDPNVERLF RQFLLLLLMN EASSGLFRFI AGLARHQVVA STLGSFGILI CMLLGGFLLA RENVKKWWIW
0701: GYWISPLMYA QNAISVNEFL GSSWNKQANP GSAEPLGKLV LESRGLFPEA KWYWIGVGAL FGYVLLFNIL YTICLTFLKP FDTNQPTISE ETLKIKQANL
0801: TGEVLEASSR GRVANTTVTA RSTLDESNDE ATVNSSQVNK GMVLPFVPLS ITFEDIRYSV DMPEAIRAQG VTETRLELLK GISGSFRPGV LTALMGVSGA
0901: GKTTLMDVLA GRKTSGYIEG NITISGYPKK QETFARISGY CEQNDIHSPN VTVYESLAFS AWLRLPADVD SSTRKMFIDE VMELVELSPL KDALVGLPGV
1001: SGLSTEQRKR LTIAVELVAN PSIIFMDEPT SGLDARAAAI VMRAIRNTVD TGRTVVCTIH QPSIDIFESF DELFLMKRGG EEIYVGPLGL HSCELIKYFE
1101: DIEGVNKIKD GYNPSTWMLE VTSTMQEQIT GINFSEVYKN SELYRRNKTL IKELSTPPEG SSDLSFPTEY SQTFLTQCFA CLWKQSMSYW RNPPYTAVKY
1201: FYTTVIALLF GTMFWGVGRK RDSQQDLFNA MGSMYASVIF MGVQNSGSVQ PVVSVERTVF YRERAAHMYS PLPYALGQVV IELPYIFVQS LIYGVLVYAM
1301: IGFEWTAAKF FWYLFFMYFT LAYYTFYGMM VVGLTPNYNI SSVASTAFYA IWNLFSGFLI PRTRIPVWWR WFYWICPIAW TLNGLVTSQF GDVTENFSNS
1401: GVRISDFVED YFGYHHDLLW LVAVVVVAFP VIFALLFGLS LKIFNFQKR
Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.