CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
plasma membrane 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0177900-01	Rice	plasma membrane	93.41	93.41
TraesCS3B01G141700.2	Wheat	golgi, unclear	93.06	92.73
HORVU3Hr1G022800.1	Barley	plasma membrane	92.92	92.59
TraesCS3A01G122500.2	Wheat	plasma membrane	92.85	92.52
TraesCS3D01G124400.2	Wheat	plasma membrane	92.71	90.18
Zm00001d039631_P002	Maize	plasma membrane	93.76	89.49
CDY48188	Canola	cytosol, peroxisome, plasma membrane	72.09	72.39
Bra034314.1-P	Field mustard	cytosol, peroxisome, plasma membrane	72.02	72.32
CDX77057	Canola	cytosol, peroxisome, plasma membrane	72.02	72.32
AT2G26910.1	Thale cress	cytosol, peroxisome, plasma membrane	71.46	71.76
GSMUA_Achr7P08510_001	Banana	plasma membrane	79.03	70.97
Solyc05g018510.2.1	Tomato	cytosol, peroxisome, plasma membrane	70.48	70.72
PGSC0003DMT400067210	Potato	plasma membrane	68.3	69.23
Solyc06g065670.2.1	Tomato	plasma membrane	67.95	68.82
EES03260	Sorghum	plasma membrane	54.42	60.62
EES04729	Sorghum	mitochondrion	59.61	58.95
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	59.68	58.65
KXG32865	Sorghum	plasma membrane	59.4	58.09
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	58.84	57.35
EES08826	Sorghum	mitochondrion	57.5	57.14
EER98908	Sorghum	cytosol, nucleus, plasma membrane	58.13	56.74
EER98758	Sorghum	cytosol, nucleus, plasma membrane	57.22	56.31
KXG32860	Sorghum	plasma membrane	57.71	56.25
OQU76555	Sorghum	mitochondrion, plasma membrane	50.42	55.61
KXG20401	Sorghum	plasma membrane	56.38	55.45
KXG37059	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	52.45	53.28
KXG36359	Sorghum	plastid	54.07	52.92
OQU81756	Sorghum	plasma membrane	45.58	51.71
EES01392	Sorghum	cytosol, peroxisome, plasma membrane	53.58	51.59
OQU80771	Sorghum	plasma membrane	42.01	51.02
OQU89274	Sorghum	plasma membrane	32.61	47.45
OQU91497	Sorghum	cytosol, nucleus, plasma membrane	43.41	44.82

Protein Annotations

MapMan:21.9.4.3	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:8056529	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1
InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	UniProt:C5XMS6	EnsemblPlants:EES00201
ProteinID:EES00201	ProteinID:EES00201.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0007275	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042335	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF280	SMART:SM00382	EnsemblPlantsGene:SORBI_3003G045700	SUPFAM:SSF52540	unigene:Sbi.20458	TMHMM:TMhelix
UniParc:UPI0001A8452D	RefSeq:XP_002455081.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:4178125..4187464

Molecular Weight (calculated)

161616.0 Da

IEP (calculated)

8.175

GRAVY (calculated)

0.136

Length

1426 amino acids

Sequence
(BLAST)

0001: MWAAEAAFSR SGSWREAEDE REALRWAALQ RLPTVTRARR GLLRSPAPDG AAVVEGDDVL CEVDVAGLSS GDRTALVDRL LADSGDAEHF FRRIRSRFDA
0101: VHIEFPKIEV RYEDLTVDAY VHVGSRALPT IPNFICNMTE AFLRHLRIYR GGRVKLPILD NISGVIRPSR MTLLLGPPSS GKTTLLLALA GRLGPGLKMS
0201: GNITYNGHHL NEFVPQRTSA YVSQQDWHAS EMTVRETLEF AGRCQGVGIK YDMLVELLRR EKNAGIKPDE DLDVFMKALA LEGKQTSLVA EYIMKILGLD
0301: ICADTIVGDE MIKGISGGQK KRLTTGELLV GSARVLFMDE ISTGLDSATT YQIIKYLRHS THALDGTTIV SLLQPAPETY ELFDDVILIA EGQIVYQGPR
0401: EYAVDFFAAM GFRCPERKNV ADFLQEVLSK KDQQQYWCHY DYPYQFVSVS KFAEAFKTFI IGKRLHQELT VPYNRHRNHP AALCTSSYGV KRLELLKSNY
0501: QWQRLLMKRN SFIYVFKFIQ LLLVALITMT VFFRSTMHHD SVDDGIIYLG ALYFAIVMIL FNGFTEVSML VTKLPVLYKH RDLHFYPPWA YTLPSWLLSI
0601: PTSLYESGMW VLVTYYVVGY DPQFTRFLGQ FLLLFFLHQT SLALFRVMAS LGRNMIVANT FGSFALLVVM ILGGFIITKE SIPVWWIWGY WISPMMYAQN
0701: AISVNEFHGH SWNKQFANQT ITMGEAILTG YGLFKEKYWF WIGVGALFGY AIILNILFTM FLTLLNPIGN LQAVVSKDEV RHRDSRRKND RVALELRSYL
0801: HSKSLSGNLK EQKGMVLPFQ PLSMCFRNIN YYVDVPVELK TQGIAEDRLQ LLVDVTGAFR PGILTALVGV SGAGKTTLMD VLAGRKTGGL IEGSITISGY
0901: PKNQETFTRI SGYCEQNDVH SPCLTVIESL LYSACLRLPS HVDADTQRAF VEEVMELVEL NPLSGALVGL PGVNGLSTEQ RKRLTIAVEL VANPSIVFMD
1001: EPTSGLDARS AAIVMRTVRN IVNTGRTIVC TIHQPSIDIF ESFDELLFMK RGGQLIYAGP LGAKSRNLVD FFEAIPGVPK IRDGYNPAAW MLEVTSTQME
1101: QILGVDFAEY YRQSKLFQQT REIVEALSRP SSESKELTFA TKYAQPFCSQ YIACLWKQNL SYWRNPQYTA VRFFYTVIIS LMFGTICWKF GSRRETQHDI
1201: FNAMGAMYAA VLFIGITNAT SVQPVISIER FVSYRERAAG MYSALPFAFS LVTVEFPYIL VQSLIYGTIF YSLGSFEWTA AKFLWYLFFM YFTLLYFTFY
1301: GMMTTAITPN HTVAPIIAAP FYTLWNLFSG FMIPRKRIPV WWRWYYWANP VSWTLYGLLT SQFGDLDQPL LLADGVTSTT VVAFLEEHFG FRHDFLCTVA
1401: AMVAGFCVLF AVVFALAIKY LNFQRR

Best Arabidopsis Sequence Match ( AT2G26910.1 )
(BLAST)

0001: MWNSAENAFS RSTSFKDEIE DEEELRWAAL QRLPTYSRIR RGIFRDMVGE PKEIQIGNLE ASEQRLLLDR LVNSVENDPE QFFARVRKRF DAVDLKFPKI
0101: EVRFQNLMVE SFVHVGSRAL PTIPNFIINM AEGLLRNIHV IGGKRNKLTI LDGISGVIRP SRLTLLLGPP SSGKTTLLLA LAGRLGTNLQ TSGKITYNGY
0201: DLKEIIAPRT SAYVSQQDWH VAEMTVRQTL EFAGRCQGVG FKYDMLLELA RREKLAGIVP DEDLDIFMKS LALGGMETSL VVEYVMKILG LDTCADTLVG
0301: DEMIKGISGG QKKRLTTGEL LVGPARVLFM DEISNGLDSS TTHQIIMYMR HSTHALEGTT VISLLQPSPE TYELFDDVIL MSEGQIIYQG PRDEVLDFFS
0401: SLGFTCPDRK NVADFLQEVT SKKDQQQYWS VPFRPYRYVP PGKFAEAFRS YPTGKKLAKK LEVPFDKRFN HSAALSTSQY GVKKSELLKI NFAWQKQLMK
0501: QNAFIYVFKF VQLLLVALIT MTVFCRTTMH HNTIDDGNIY LGSLYFSMVI ILFNGFTEVP MLVAKLPVLY KHRDLHFYPS WAYTLPSWLL SIPTSIIESA
0601: TWVAVTYYTI GYDPLFSRFL QQFLLYFSLH QMSLGLFRVM GSLGRHMIVA NTFGSFAMLV VMTLGGFIIS RDSIPSWWIW GYWISPLMYA QNAASVNEFL
0701: GHNWQKTAGN HTSDSLGLAL LKERSLFSGN YWYWIGVAAL LGYTVLFNIL FTLFLAHLNP WGKFQAVVSR EELDEREKKR KGDEFVVELR EYLQHSGSIH
0801: GKYFKNRGMV LPFQPLSLSF SNINYYVDVP LGLKEQGILE DRLQLLVNIT GAFRPGVLTA LVGVSGAGKT TLMDVLAGRK TGGTIEGDVY ISGFPKRQET
0901: FARISGYCEQ NDVHSPCLTV VESLLFSACL RLPADIDSET QRAFVHEVME LVELTSLSGA LVGLPGVDGL STEQRKRLTI AVELVANPSI VFMDEPTSGL
1001: DARAAAIVMR TVRNIVNTGR TIVCTIHQPS IDIFESFDEL LFMKRGGELI YAGPLGQKSC ELIKYFESIE GVQKIKPGHN PAAWMLDVTA STEEHRLGVD
1101: FAEIYRNSNL CQRNKELIEV LSKPSNIAKE IEFPTRYSQS LYSQFVACLW KQNLSYWRNP QYTAVRFFYT VVISLMLGTI CWKFGSKRDT QQQLFNAMGS
1201: MYAAVLFIGI TNATAAQPVV SIERFVSYRE RAAGMYSALP FAFAQVFIEF PYVLAQSTIY STIFYAMAAF EWSAVKFLWY LFFMYFSIMY FTFYGMMTTA
1301: ITPNHNVASI IAAPFYMLWN LFSGFMIPYK RIPLWWRWYY WANPVAWTLY GLLVSQYGDD ERSVKLSDGI HQVMVKQLLE DVMGYKHDFL GVSAIMVVAF
1401: CVFFSLVFAF AIKAFNFQRR

Arabidopsis Description

ABCG32PEC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.