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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 1
  • cytosol 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021647_P003 Maize plastid 94.1 94.81
Os07t0522500-01 Rice plasma membrane 27.8 81.49
TraesCS2D01G051800.1 Wheat plasma membrane 73.3 76.29
KXG37059 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 72.0 74.72
CDY65389 Canola cytosol 3.84 70.0
KRH67874 Soybean mitochondrion 27.32 63.68
VIT_06s0061g01490.t01 Wine grape plastid 61.91 62.04
VIT_08s0007g03710.t01 Wine grape plastid 61.56 61.82
PGSC0003DMT400068277 Potato cytosol 56.55 61.68
CDX79673 Canola cytosol, peroxisome, plasma membrane 51.2 61.1
Solyc11g067000.1.1 Tomato extracellular, plastid 60.12 59.88
PGSC0003DMT400050158 Potato cytosol, peroxisome, plasma membrane 59.23 59.68
PGSC0003DMT400050166 Potato plastid 56.49 59.12
VIT_13s0074g00680.t01 Wine grape plastid 59.85 59.08
Solyc11g007300.1.1 Tomato plastid 59.3 59.02
AT2G36380.1 Thale cress cytosol, mitochondrion, peroxisome, plasma membrane 58.75 58.91
GSMUA_Achr8P07660_001 Banana mitochondrion, peroxisome, plasma membrane 62.53 58.89
Solyc11g007280.1.1 Tomato plastid 59.23 58.79
CDY43723 Canola cytosol, mitochondrion, peroxisome, plasma membrane 58.61 58.77
KRH34743 Soybean plasma membrane 48.66 58.69
PGSC0003DMT400060396 Potato plastid 59.3 58.46
Bra023065.1-P Field mustard cytosol, mitochondrion, peroxisome, plasma membrane 56.97 58.08
Solyc05g055330.2.1 Tomato plastid 58.89 58.05
AT1G66950.1 Thale cress plastid 57.93 58.05
KRH71633 Soybean nucleus 58.89 57.97
KRH67876 Soybean plasma membrane 30.54 57.87
EES03260 Sorghum plasma membrane 50.24 57.19
EES04729 Sorghum mitochondrion 56.21 56.8
KXG32863 Sorghum cytosol, peroxisome, plasma membrane 56.14 56.37
KRG92040 Soybean extracellular 56.97 56.31
EES08826 Sorghum mitochondrion 55.32 56.17
KXG32865 Sorghum plasma membrane 56.01 55.97
PGSC0003DMT400060117 Potato cytosol 38.71 55.57
EES03255 Sorghum cytosol, peroxisome, plasma membrane, plastid 55.59 55.37
EER98908 Sorghum cytosol, nucleus, plasma membrane 54.98 54.83
EER98758 Sorghum cytosol, nucleus, plasma membrane 54.5 54.8
KXG32860 Sorghum plasma membrane 54.98 54.75
EES00201 Sorghum plasma membrane 52.92 54.07
OQU76555 Sorghum mitochondrion, plasma membrane 47.77 53.83
KXG20401 Sorghum plasma membrane 51.68 51.93
CDX84561 Canola cytosol, mitochondrion, peroxisome, plasma membrane 57.1 51.01
OQU81756 Sorghum plasma membrane 43.65 50.6
OQU80771 Sorghum plasma membrane 40.43 50.17
EES01392 Sorghum cytosol, peroxisome, plasma membrane 51.0 50.17
OQU89274 Sorghum plasma membrane 32.19 47.86
OQU91497 Sorghum cytosol, nucleus, plasma membrane 43.86 46.27
Bra017241.1-P Field mustard cytosol, mitochondrion, nucleus, plasma membrane 58.61 37.62
Os07t0522600-02 Rice plasma membrane 0.0 0.0
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300UniProt:A0A1B6QEL2InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1InterPro:ABCG_PDR_2
InterPro:ABC_2_transInterPro:ABC_trans_NInterPro:ABC_transporter-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887InterPro:IPR003439EnsemblPlants:KXG36359ProteinID:KXG36359
ProteinID:KXG36359.1InterPro:P-loop_NTPaseInterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370
PFAM:PF14510PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF429SMART:SM00382EnsemblPlantsGene:SORBI_3002G321300
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI00081ABFEDSEG:seg::
Description
hypothetical protein
Coordinates
chr2:+:69290780..69304327
Molecular Weight (calculated)
163923.0 Da
IEP (calculated)
7.963
GRAVY (calculated)
0.033
Length
1457 amino acids
Sequence
(BLAST)
0001: MAGEIVAPSS SGSRRWLSAA ASISRSLRAG GDVDDDPFRR SQASRRGDDD GDDEENLRWA ALEKLPTYDR MRRGIIRRAL DLDDDTSSNK QVSADEVDIA
0101: NLDPRAAREL MERVFKAVQD DNERLLRRLR DRLDLVGIEL PQIEVRYEHL SVEAEVYVGA RALPTLLNSA INVVEGLVSK FVSSNKRTLK ILNDVSGIIK
0201: PSRMTLLLGP PSSGKTTLMR ALTGKPAKNL KVSGKITYCG HEFSEFYPER TSAYVSQYDL HNGEMTVRET MDFSRRCLGI GARYDMLSEL ARRERNAGIK
0301: PDPEIDAFMK ATAVEGKETN LITDIILKVL GLDICADIIV GDEMKRGISG GQKKRVTTGE MLTGPAKALF MDEISTGLDS NSTFQIVKYI RQTVHVMNNT
0401: VMISLLQPPP ETYNLFDDII LLSEGYIVYH GPREDILEFF ESAGFRCPER KGVADFLQEV TSRKDQQQYL CHNQEHYHYV SVPEFVQHFK TFHAGQKLQK
0501: ELQVPYDKSK THPAALTTQK YGLSSWESLK AVLSREWLLM KRNSFLYIFK FFQLLVLALL TMTVFFRTKM PSGTFSDNGK FMGALASSLI TIMFIGITEM
0601: NMTIKKLQVF YKQRDYLFFP GWTFGLATII LKIPFSLLDS FMWTSVTYYV IGFAPAPGRF FSQFLAYFLT HQMAVALFRL LGAILKTMVV ANTFGMFTML
0701: IVFLFGGILL PRQDIKHWWI WAYWSSPMMY SNNAISINEF LATRWAIPNT EASIAAPTIG KAILKYKGYF GGQWGYWLSI GAMIGYTILF NILFLCALTF
0801: LSPGGSSNAI VSDDDDKKKL TDQGQIFHVP DGTNEAANRR TQTGMVLPFQ PLSLSFNHMN YYVDMPAAMK EQGFTESRLQ LLSDISGAFR PGVLTALVGV
0901: SGAGKTTLMD VLAGRKTSGT IEGDIKLSGY PKKQETFARI SGYCEQTDIH SPNVTVYESL VYSAWLRLSS EVDDNTRKMF VEEVMSLVEL DVLRDALVGL
1001: PGVSGLSTEQ RKRLTIAVEL VANPSVIFMD EPTSGLDARA AAIVMRTVRN TVNTGRTVVC TIHQPSIDIF EAFDELLLLK RGGRVIYAGQ LGVQSRILVE
1101: YFEAIPGVPK ITEGYNPATW MLEVSSPLAE ARMDVDFAEI YANSALYRSN QELIKELSIP PPGYQDLSFP TKYAQNFLNQ CMANTWKQFQ SYWKNPPYNA
1201: MRYLMTLLYG IVFGTVFWRM GKNVESEQEL QNLLGATYAA VFFLGSANLL SSVPVFSIER TVFYREKAAG MFSPLSYSFA VTVVELVYSI AQGILYTIPL
1301: YAMIGYEWKA DKFFYFLFFL TCCFLYFSLF GAMLVTCTPS AMLASIVVSF SLTGWNIFAG FLVPRPALPI WWRWFYWCNP VSWTIYGVTA SQFGDVGRNV
1401: TATGSSTGTV VVKEFLDQTL GMKHDFLGYV VLAHFGYILL FVFLFAYGTK ALNFQKR
Best Arabidopsis Sequence Match ( AT1G15210.1 )
(BLAST)
0001: MDYDPAHAMS RGGSMRQTIS RSVSKASRNM EDIFNTSSRR TKSVNEDEEA LKWASIEKLP TYNRLRTSLM PELGEDDVYG NQILNKAVDV TKLDGEERQK
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR
Arabidopsis Description
ABCG35PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.