Factsheet for PGSC0003DMT400060396

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g055330.2.1	Tomato	plastid	95.47	95.47
PGSC0003DMT400060117	Potato	cytosol	61.03	88.87
CDY65389	Canola	cytosol	4.53	83.75
PGSC0003DMT400050158	Potato	cytosol, peroxisome, plasma membrane	81.06	82.85
PGSC0003DMT400050166	Potato	plastid	69.55	73.85
PGSC0003DMT400068277	Potato	cytosol	66.04	73.05
VIT_13s0074g00680.t01	Wine grape	plastid	72.53	72.63
KRH34743	Soybean	plasma membrane	58.86	72.02
CDX79673	Canola	cytosol, peroxisome, plasma membrane	59.2	71.66
CDY43723	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	69.55	70.75
AT2G36380.1	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	69.22	70.41
KRH71633	Soybean	nucleus	70.37	70.27
AT1G66950.1	Thale cress	plastid	69.01	70.15
KRG92040	Soybean	extracellular	69.22	69.4
Bra023065.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	66.85	69.14
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	28.01	66.24
Os07t0522500-01	Rice	plasma membrane	21.45	63.78
GSMUA_Achr8P07660_001	Banana	mitochondrion, peroxisome, plasma membrane	66.04	63.09
TraesCS5A01G447200.1	Wheat	plasma membrane	52.84	62.78
TraesCS5D01G023400.1	Wheat	plasma membrane	35.05	62.48
PGSC0003DMT400076209	Potato	plasma membrane	60.35	62.25
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	52.1	61.85
Os02t0318500-00	Rice	plasma membrane	19.08	61.71
HORVU7Hr1G037750.8	Barley	cytosol, plasma membrane	46.35	61.66
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	59.54	61.32
PGSC0003DMT400076208	Potato	plastid	59.54	61.11
HORVU5Hr1G124650.12	Barley	plasma membrane	31.26	60.87
TraesCS5A01G016200.1	Wheat	mitochondrion	58.93	60.7
CDX84561	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	66.91	60.64
TraesCS4A01G331100.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	59.2	60.6
TraesCS7A01G183900.1	Wheat	plasma membrane	56.5	60.51
TraesCS7D01G185700.2	Wheat	plasma membrane	53.99	60.5
KXG37059	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	57.37	60.4
TraesCS5B01G572600.1	Wheat	plastid	59.27	60.29
TraesCS5B01G449500.1	Wheat	plastid	58.93	59.94
TraesCS5D01G564000.1	Wheat	plastid	58.93	59.86
TraesCS7B01G088800.1	Wheat	plastid	58.66	59.75
TraesCS7B01G000200.1	Wheat	plastid	58.8	59.64
TraesCS5D01G452500.1	Wheat	plastid	58.52	59.61
Zm00001d021647_P003	Maize	plastid	58.32	59.61
TraesCS2B01G606700.2	Wheat	plastid	58.73	59.37
KXG36359	Sorghum	plastid	58.46	59.3
Zm00001d025012_P003	Maize	plastid	58.46	58.82
Zm00001d009037_P003	Maize	plastid	58.25	58.77
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	48.31	58.67
TraesCS2D01G051800.1	Wheat	plasma membrane	55.48	58.57
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	6.02	58.55
HORVU5Hr1G106850.1	Barley	cytosol	58.8	58.09
Zm00001d034940_P003	Maize	plastid	57.98	57.52
Os11t0587600-01	Rice	plasma membrane	25.24	56.09
PGSC0003DMT400006729	Potato	plastid	56.5	55.67
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	57.58	53.86
PGSC0003DMT400067210	Potato	plasma membrane	50.95	53.52
PGSC0003DMT400046986	Potato	plasma membrane	30.45	50.56
Bra017241.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	69.55	45.29
Os07t0522600-02	Rice	plasma membrane	0.14	0.31

Protein Annotations

EntrezGene:102580487	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2
InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	UniProt:M1C5S5	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005
PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	EnsemblPlantsGene:PGSC0003DMG400023490	PGSC:PGSC0003DMG400023490	EnsemblPlants:PGSC0003DMT400060396
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF261	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI00029690B7	RefSeq:XP_006345864.1	SEG:seg	:	:	:

Description

Pleiotropic drug resistance protein 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400023490]

Coordinates

chr5:+:50999727..51008690

Molecular Weight (calculated)

167903.0 Da

IEP (calculated)

7.714

GRAVY (calculated)

0.061

Length

1478 amino acids

Sequence
(BLAST)

0001: MSATISKDEL NKSLSRRSMS RSRRMSFGST SVRSWASASV TEVLTAPGGD VFQRNGREND DEDELKWAAI ERLPTYDRLR KGILKQTLDD GKIVHQEVDV
0101: TNLGLQDKKQ LMESILRIVE EDNERFLLRL RDRTDRVGID IPKIEVRYEH LSIEGDTYDG SRALPTLWNA TINFVEGALE KIKLVPSKKR AVKILRDVSG
0201: IIKPSRMILL LGPPGGGKTT LLKSLAGVPD KDLRVAGKIS YCGHELSYFI PQRTCAYISQ HDLHHGEMTV RETLDFAGRS LGVGTRYDLL TELSRREKEL
0301: GIKPDPEIDA FMKAIAVAGQ ESSLVTDYVL KLLGLDICAD IMVGDQMRRG ISGGQKKRLT TGEMLVGPAK VFFMDEISTG LDSSTTFQIV KYMRQMVHIM
0401: DVTMIISLLQ PAPETFELFD DIILLSEGRI VYQGPRENVL EFFESVGFKC PERKGIADFL QEVTSLKDQE QYWFRENQPY RFITVAEFAE RFSNFRVGRE
0501: LLDELEVAYD KSKAHPAALV TEKYGISNME LFKACLSREW LLIKRNSFLY MFKTFQITVM SIITFTVFFR TEMKVGQIAD GGKFYGALFF SLINVMFNGA
0601: AELAMIIFRL PVFFKQRDSL FYPAWAFALP IWLLRIPLSF MESLIWVVLT YYTIGFAPAA SRFFRQFLVF FALHQMALSL FRFIAAIGRT LVVASTIGTF
0701: SLLIVFVLGG FIVAKDDLEP WIKWGYYASP MSYAQNAIAI NEFLDTRWST HNNDTSFSEE TVGKVLLKSR SMYSDDYMFW ICIIALFAFS FLFNLCFILA
0801: LTYLNPFADS TSVSMDDDKS KKNEQRNRSP KESTEKSSAS TTATFEGIDM AVRNNSSIDK RASKKRGMVL PFQPLSLAFN HVNYYVDMPE EMKSQGIEET
0901: RLQLLRDVSG TFRPGVLTAL VGVSGAGKTT LMDVLAGRKT GGYTDGSIII SGYLKNQSTF ARISGYCEQN DIHSPHVTVY ESLIYSAWLR LSPDVKKETR
1001: KNFVEEVMEL VELNPLQNCL VGLPGVDGLS TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRT VRNTVDTGRT VVCTIHQPSI DIFEAFDELL
1101: LMKRGGQVIY AGPLGHHSRL LIEYFQSVPG VPTVKEGYNP ATWMLDITTP AVEGQLNVDF GDIYANSDLY RRNQELIKQL SVPVPGSQDL HFPTKYSQPF
1201: VDQCKACFWK QHLSYWRHPQ YNAVRFFMTA IIGIIFGIIF WDKGNKMYKL QDLLNLLGAM YAAVMFLGGT NTSTVQSVVA VERTVFYRER GAGMYSALPY
1301: AFAQVAIETI YIAIQTVIYS LLLYSMIGFH WTAAKFFWFY FFIFMCFVYF TMYGMMLVAL TPNYQIAAIV MTFFLSFWNL FSGFLIPRLQ IPIWWRWYYW
1401: GSPVAWTIYG LVTSLVGDKN DNVEVPGVGE IPLKLFLKDY LGFEYDFLGV VAVAHVAWAV LFSFVFAYGI KFLNFQRR

Best Arabidopsis Sequence Match ( AT2G36380.1 )
(BLAST)

0001: MLGRDEDLVR TMSGRGSLGS TSHRSLAGAA SKSFRDVFAP PTDDVFGRSD RREEDDVELR WAALERLPTY DRLRKGMLPQ TMVNGKIGLE DVDVTNLAPK
0101: EKKHLMEMIL KFVEEDNEKF LRRLRERTDR VGIEVPKIEV RYENLSVEGD VRSASRALPT LFNVTLNTIE SILGLFHLLP SKKRKIEILK DISGIIKPSR
0201: MTLLLGPPSS GKTTLLQALA GKLDDTLQMS GRITYCGHEF REFVPQKTCA YISQHDLHFG EMTVRESLDF SGRCLGVGTR YQLLTELSRR EREAGIKPDP
0301: EIDAFMKSIA ISGQETSLVT DYVLKLLGLD ICADTLVGDV MRRGISGGQR KRLTTGEMLV GPATALFMDE ISTGLDSSTT FQICKFMRQL VHIADVTMVI
0401: SLLQPAPETF ELFDDIILLS EGQIVYQGSR DNVLEFFEYM GFKCPERKGI ADFLQEVTSK KDQEQYWNRR EHPYSYVSVH DFSSGFNSFH AGQQLASEFR
0501: VPYDKAKTHP AALVTQKYGI SNKDLFKACF DREWLLMKRN SFVYVFKTVQ ITIMSLIAMT VYFRTEMHVG TVQDGQKFYG ALFFSLINLM FNGMAELAFT
0601: VMRLPVFFKQ RDFLFYPPWA FALPGFLLKI PLSLIESVIW IALTYYTIGF APSAARFFRQ LLAYFCVNQM ALSLFRFLGA LGRTEVIANS GGTLALLVVF
0701: VLGGFIISKD DIPSWLTWCY YTSPMMYGQT ALVINEFLDE RWGSPNNDTR INAKTVGEVL LKSRGFFTEP YWFWICIGAL LGFTVLFNFC YIIALMYLNP
0801: LGNSKATTVV EEGKDKHKGS HSGTGGSVVE LTSTSSHGPK KGMVLPFQPL SLAFNNVNYY VDMPAEMKAQ GVEGDRLQLL RDVGGAFRPG VLTALVGVSG
0901: AGKTTLMDVL AGRKTGGYVE GSINISGYPK NQATFARVSG YCEQNDIHSP HVTVYESLIY SAWLRLSADI DTKTREMFVE EVMELVELKP LRNSIVGLPG
1001: VDGLSTEQRK RLTIAVELVA NPSIIFMDEP TSGLDARAAA IVMRTVRNTV DTGRTVVCTI HQPSIDIFES FDELLLMKRG GQVIYAGTLG HHSQKLVEYF
1101: EAIEGVPKIK DGYNPATWML DVTTPSMESQ MSVDFAQIFV NSSVNRRNQE LIKELSTPPP GSNDLYFRTK YAQPFSTQTK ACFWKMYWSN WRYPQYNAIR
1201: FLMTVVIGVL FGLLFWQTGT KIEKEQDLNN FFGAMYAAVL FLGATNAATV QPAVAIERTV FYREKAAGMY SAIPYAISQV AVEIMYNTIQ TGVYTLILYS
1301: MIGYDWTVVK FFWFYYYMLT CFVYFTLYGM MLVALTPNYQ IAGICLSFFL SFWNLFSGFL IPRPQIPIWW RWYYWASPVA WTLYGIITSQ VGDRDSIVHI
1401: TGVGDMSLKT LLKNGFGFDY DFLPVVAVVH IAWILIFLFA FAYGIKFLNF QRR

Arabidopsis Description

ABCG34ABC transporter G family member 34 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC87]
SUBAcon: [mitochondrion,peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.