Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 2
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43723 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 90.51 | 90.57 |
| CDX79673 | Canola | cytosol, peroxisome, plasma membrane | 75.79 | 90.25 |
| AT2G36380.1 | Thale cress | cytosol, mitochondrion, peroxisome, plasma membrane | 89.0 | 89.06 |
| Bra023065.1-P | Field mustard | cytosol, mitochondrion, peroxisome, plasma membrane | 87.35 | 88.87 |
| CDX84561 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 87.41 | 77.93 |
| VIT_08s0007g03710.t01 | Wine grape | plastid | 74.69 | 74.84 |
| KRH67874 | Soybean | mitochondrion | 31.02 | 72.16 |
| PGSC0003DMT400060396 | Potato | plastid | 70.15 | 69.01 |
| PGSC0003DMT400068277 | Potato | cytosol | 63.27 | 68.86 |
| PGSC0003DMT400050166 | Potato | plastid | 65.75 | 68.68 |
| Solyc05g055330.2.1 | Tomato | plastid | 69.67 | 68.54 |
| Solyc11g007300.1.1 | Tomato | plastid | 68.98 | 68.51 |
| VIT_13s0074g00680.t01 | Wine grape | plastid | 69.46 | 68.43 |
| KRH67876 | Soybean | plasma membrane | 36.18 | 68.4 |
| VIT_06s0061g01490.t01 | Wine grape | plastid | 68.36 | 68.36 |
| PGSC0003DMT400050158 | Potato | cytosol, peroxisome, plasma membrane | 67.81 | 68.19 |
| Solyc11g007280.1.1 | Tomato | plastid | 68.64 | 67.98 |
| Solyc11g067000.1.1 | Tomato | extracellular, plastid | 67.74 | 67.33 |
| PGSC0003DMT400060117 | Potato | cytosol | 45.94 | 65.81 |
| Os02t0318500-00 | Rice | plasma membrane | 20.01 | 63.68 |
| TraesCS5D01G023400.1 | Wheat | plasma membrane | 36.18 | 63.45 |
| TraesCS5A01G447200.1 | Wheat | plasma membrane | 53.99 | 63.1 |
| Os07t0522500-01 | Rice | plasma membrane | 21.11 | 61.77 |
| HORVU7Hr1G037750.8 | Barley | cytosol, plasma membrane | 47.04 | 61.57 |
| TraesCS5A01G016200.1 | Wheat | mitochondrion | 60.11 | 60.91 |
| HORVU5Hr1G124650.12 | Barley | plasma membrane | 31.77 | 60.87 |
| KXG37059 | Sorghum | cytosol, mitochondrion, peroxisome, plasma membrane | 58.6 | 60.68 |
| TraesCS7A01G183900.1 | Wheat | plasma membrane | 57.29 | 60.36 |
| TraesCS7D01G185700.2 | Wheat | plasma membrane | 54.75 | 60.35 |
| TraesCS4A01G331100.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 59.9 | 60.32 |
| TraesCS5B01G572600.1 | Wheat | plastid | 60.18 | 60.22 |
| TraesCS7B01G000200.1 | Wheat | plastid | 60.25 | 60.12 |
| TraesCS5D01G564000.1 | Wheat | plastid | 60.11 | 60.07 |
| GSMUA_Achr8P07660_001 | Banana | mitochondrion, peroxisome, plasma membrane | 63.48 | 59.66 |
| TraesCS7B01G088800.1 | Wheat | plastid | 59.22 | 59.34 |
| TraesCS5D01G452500.1 | Wheat | plastid | 59.15 | 59.27 |
| TraesCS5B01G449500.1 | Wheat | plastid | 59.22 | 59.26 |
| TraesCS2B01G606700.2 | Wheat | plastid | 59.15 | 58.82 |
| AT1G15520.1 | Thale cress | plastid | 57.57 | 58.82 |
| Zm00001d025012_P003 | Maize | plastid | 59.28 | 58.68 |
| Zm00001d009037_P003 | Maize | plastid | 59.01 | 58.57 |
| TraesCS2D01G051800.1 | Wheat | plasma membrane | 56.19 | 58.36 |
| AT3G16340.1 | Thale cress | plasma membrane | 56.74 | 58.26 |
| Zm00001d021647_P003 | Maize | plastid | 57.63 | 57.95 |
| KXG36359 | Sorghum | plastid | 58.05 | 57.93 |
| Bra017241.1-P | Field mustard | cytosol, mitochondrion, nucleus, plasma membrane | 90.37 | 57.89 |
| HORVU5Hr1G106850.1 | Barley | cytosol | 59.49 | 57.82 |
| Zm00001d034940_P003 | Maize | plastid | 58.8 | 57.38 |
| Os11t0587600-01 | Rice | plasma membrane | 25.72 | 56.24 |
| AT1G59870.1 | Thale cress | plasma membrane, plastid | 56.4 | 55.82 |
| AT2G26910.1 | Thale cress | cytosol, peroxisome, plasma membrane | 54.33 | 55.63 |
| AT2G29940.1 | Thale cress | cytosol, peroxisome, plasma membrane | 52.34 | 53.37 |
| AT3G53480.1 | Thale cress | cytosol, peroxisome, plasma membrane | 51.03 | 51.17 |
| AT3G30842.1 | Thale cress | cytosol | 49.31 | 50.56 |
| AT4G15233.1 | Thale cress | cytosol, peroxisome, plasma membrane | 45.94 | 47.99 |
| Os07t0522600-02 | Rice | plasma membrane | 0.07 | 0.16 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | EntrezGene:843013 | InterPro:AAA+_ATPase | ProteinID:AAF98206.1 | ProteinID:AAG50592.1 |
| InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans | InterPro:ABC_trans_N | InterPro:ABC_transporter-like | ProteinID:AEE34577.1 | ArrayExpress:AT1G66950 |
| EnsemblPlantsGene:AT1G66950 | RefSeq:AT1G66950 | TAIR:AT1G66950 | RefSeq:AT1G66950-TAIR-G | EnsemblPlants:AT1G66950.1 | TAIR:AT1G66950.1 |
| Unigene:At.35712 | ProteinID:DAA00879.1 | GO:GO:0000166 | GO:GO:0000302 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006855 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | InterPro:IPR003439 | RefSeq:NP_176867.2 | InterPro:P-loop_NTPase |
| Symbol:PDR11 | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 |
| PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020090 | PO:PO:0025022 |
| PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF322 | UniProt:Q7PC84 | SMART:SM00382 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | UniParc:UPI0000163247 | SEG:seg | : | : | : |
Description
ABCG39ABC transporter G family member 39 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC84]
Coordinates
chr1:+:24978121..24984619
Molecular Weight (calculated)
165203.0 Da
IEP (calculated)
7.258
GRAVY (calculated)
0.025
Length
1454 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAMLGRDED PVGALSGRVS LASTSHRSLV GASKSFRDVF MPQTDEVFGR SERREEDDME LRWAAIERLP TFDRLRKGML PQTSANGKIE LEDIDLTRLE
0101: PKDKKHLMEM ILSFVEEDNE KFLRDLRERT DRVGIEVPKI EVRYENISVE GDVRSASRAL PTLFNVTLNT LESILGFFHL LPSKRKKIQI LKDISGIVKP
0201: SRMTLLLGPP SSGKTTLLQA LAGKLDDTLQ MSGRITYCGH EFREFVPQKT CAYISQHDLH FGEMTVREIL DFSGRCLGVG SRYQLMSELS RREKEEGIKP
0301: DPKIDAFMKS IAISGQETSL VTDYVLKILG LDICADILAG DVMRRGISGG QKKRLTTGEM LVGPARALFM DEISTGLDSS TTFQICKFMR QLVHISDVTM
0401: IISLLQPAPE TFELFDDIIL LSEGQIVYQG PRDNVLEFFE YFGFQCPERK GVADFLQEVT SKKDQEQYWN KREQPYNYVS VSDFSSGFST FHTGQKLTSE
0501: FRVPYDKAKT HSAALVTQKY GISNWELFKA CFDREWLLMK RNSFVYVFKT VQITIMSLIT MTVYLRTEMH VGTVRDGQKF YGAMFFSLIN VMFNGLAELA
0601: FTVMRLPVFY KQRDFLFYPP WAFALPAWLL KIPLSLIESG IWIGLTYYTI GFAPSAARFF RQLLAYFCVN QMALSLFRFL GAIGRTEVIS NSIGTFTLLI
0701: VFTLGGFIIA KDDIRPWMTW AYYMSPMMYG QTAIVMNEFL DERWSSPNYD TRINAKTVGE VLLKSRGFFT EPYWFWICIV ALLGFSLLFN LFYILALMYL
0801: NPLGNSKATV VEEGKDKQKG ENRGTEGSVV ELNSSSNKGP KRGMVLPFQP LSLAFNNVNY YVDMPSEMKA QGVEGDRLQL LRDVGGAFRP GILTALVGVS
0901: GAGKTTLMDV LAGRKTGGYI EGSISISGYP KNQTTFARVS GYCEQNDIHS PHVTVYESLI YSAWLRLSTD IDIKTRELFV EEVMELVELK PLRNSIVGLP
1001: GVDGLSTEQR KRLTIAVELV ANPSIIFMDE PTSGLDARAA AIVMRTVRNT VDTGRTVVCT IHQPSIDIFE SFDELLLMKR GGQVIYAGSL GHHSQKLVEY
1101: FEAVEGVPKI NDGYNPATWM LDVTTPSMES QMSLDFAQIF SNSSLYRRNQ ELIKDLSTPP PGSKDVYFKT KYAQSFSTQT KACFWKQYWS YWRHPQYNAI
1201: RFLMTVVIGV LFGLIFWQIG TKTENEQDLN NFFGAMYAAV LFLGALNAAT VQPAIAIERT VFYREKAAGM YSAIPYAISQ VAVEIMYNTI QTGVYTLILY
1301: SMIGCNWTMA KFLWFYYYML TSFIYFTLYG MMLMALTPNY QIAGICMSFF LSLWNLFSGF LIPRPQIPIW WRWYYWATPV AWTLYGLITS QVGDKDSMVH
1401: ISGIGDIDLK TLLKEGFGFE HDFLPVVAVV HIAWILLFLF VFAYGIKFLN FQRR
0101: PKDKKHLMEM ILSFVEEDNE KFLRDLRERT DRVGIEVPKI EVRYENISVE GDVRSASRAL PTLFNVTLNT LESILGFFHL LPSKRKKIQI LKDISGIVKP
0201: SRMTLLLGPP SSGKTTLLQA LAGKLDDTLQ MSGRITYCGH EFREFVPQKT CAYISQHDLH FGEMTVREIL DFSGRCLGVG SRYQLMSELS RREKEEGIKP
0301: DPKIDAFMKS IAISGQETSL VTDYVLKILG LDICADILAG DVMRRGISGG QKKRLTTGEM LVGPARALFM DEISTGLDSS TTFQICKFMR QLVHISDVTM
0401: IISLLQPAPE TFELFDDIIL LSEGQIVYQG PRDNVLEFFE YFGFQCPERK GVADFLQEVT SKKDQEQYWN KREQPYNYVS VSDFSSGFST FHTGQKLTSE
0501: FRVPYDKAKT HSAALVTQKY GISNWELFKA CFDREWLLMK RNSFVYVFKT VQITIMSLIT MTVYLRTEMH VGTVRDGQKF YGAMFFSLIN VMFNGLAELA
0601: FTVMRLPVFY KQRDFLFYPP WAFALPAWLL KIPLSLIESG IWIGLTYYTI GFAPSAARFF RQLLAYFCVN QMALSLFRFL GAIGRTEVIS NSIGTFTLLI
0701: VFTLGGFIIA KDDIRPWMTW AYYMSPMMYG QTAIVMNEFL DERWSSPNYD TRINAKTVGE VLLKSRGFFT EPYWFWICIV ALLGFSLLFN LFYILALMYL
0801: NPLGNSKATV VEEGKDKQKG ENRGTEGSVV ELNSSSNKGP KRGMVLPFQP LSLAFNNVNY YVDMPSEMKA QGVEGDRLQL LRDVGGAFRP GILTALVGVS
0901: GAGKTTLMDV LAGRKTGGYI EGSISISGYP KNQTTFARVS GYCEQNDIHS PHVTVYESLI YSAWLRLSTD IDIKTRELFV EEVMELVELK PLRNSIVGLP
1001: GVDGLSTEQR KRLTIAVELV ANPSIIFMDE PTSGLDARAA AIVMRTVRNT VDTGRTVVCT IHQPSIDIFE SFDELLLMKR GGQVIYAGSL GHHSQKLVEY
1101: FEAVEGVPKI NDGYNPATWM LDVTTPSMES QMSLDFAQIF SNSSLYRRNQ ELIKDLSTPP PGSKDVYFKT KYAQSFSTQT KACFWKQYWS YWRHPQYNAI
1201: RFLMTVVIGV LFGLIFWQIG TKTENEQDLN NFFGAMYAAV LFLGALNAAT VQPAIAIERT VFYREKAAGM YSAIPYAISQ VAVEIMYNTI QTGVYTLILY
1301: SMIGCNWTMA KFLWFYYYML TSFIYFTLYG MMLMALTPNY QIAGICMSFF LSLWNLFSGF LIPRPQIPIW WRWYYWATPV AWTLYGLITS QVGDKDSMVH
1401: ISGIGDIDLK TLLKEGFGFE HDFLPVVAVV HIAWILLFLF VFAYGIKFLN FQRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.