Factsheet for AT4G15233.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65557	Canola	plasma membrane	21.98	81.82
Bra012797.1-P	Field mustard	cytosol	80.32	81.55
CDY58247	Canola	cytosol	53.3	81.18
CDY63361	Canola	plasma membrane	22.99	80.4
CDY65558	Canola	cytosol	53.23	79.08
KRH02448	Soybean	plasma membrane	63.0	60.4
GSMUA_Achr3P01060_001	Banana	plasma membrane	55.75	57.4
AT3G53480.1	Thale cress	cytosol, peroxisome, plasma membrane	57.83	55.52
TraesCS7D01G465900.2	Wheat	cytosol, peroxisome, plasma membrane	54.45	54.49
TraesCS5D01G163700.1	Wheat	cytosol, peroxisome, plasma membrane	56.75	54.3
TraesCS5D01G163500.1	Wheat	plasma membrane	56.61	54.16
HORVU5Hr1G049490.3	Barley	nucleus, plastid	54.17	54.09
TraesCS4B01G054700.1	Wheat	cytosol, peroxisome, plasma membrane	55.68	53.97
TraesCS7A01G478500.1	Wheat	cytosol, peroxisome, plasma membrane	53.88	53.88
TraesCS5B01G155400.3	Wheat	plasma membrane	55.17	53.71
TraesCS5A01G158100.1	Wheat	plasma membrane	55.96	53.54
Zm00001d023392_P002	Maize	cytosol, peroxisome, plasma membrane	56.47	53.4
TraesCS5A01G158300.1	Wheat	plasma membrane	55.75	53.26
TraesCS7B01G381200.2	Wheat	plasma membrane	54.17	52.99
GSMUA_Achr1P18390_001	Banana	cytosol, nucleus, plasma membrane, plastid	56.82	52.63
TraesCS4A01G384800.1	Wheat	cytosol, nucleus, plasma membrane	52.87	52.5
TraesCS7B01G381000.1	Wheat	cytosol, nucleus, plasma membrane	52.3	52.41
Os12t0512700-01	Rice	cytosol, peroxisome	28.45	51.76
OQU91497	Sorghum	cytosol, nucleus, plasma membrane	50.93	51.34
AT3G16340.1	Thale cress	plasma membrane	49.07	48.23
AT1G15520.1	Thale cress	plastid	48.35	47.29
AT1G59870.1	Thale cress	plasma membrane, plastid	49.43	46.83
AT2G36380.1	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	48.56	46.52
AT1G66950.1	Thale cress	plastid	47.99	45.94
AT2G26910.1	Thale cress	cytosol, peroxisome, plasma membrane	45.83	44.93
AT2G29940.1	Thale cress	cytosol, peroxisome, plasma membrane	45.4	44.32
AT3G30842.1	Thale cress	cytosol	44.4	43.58
Os12t0239900-01	Rice	plasma membrane	2.23	43.06

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:827188	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	ProteinID:AEE83572.2	ProteinID:AEE83573.1	EMBL:AL161541	ProteinID:ANM67612.1	ProteinID:ANM67615.1
ArrayExpress:AT4G15233	EnsemblPlantsGene:AT4G15233	RefSeq:AT4G15233	TAIR:AT4G15233	RefSeq:AT4G15233-TAIR-G	EnsemblPlants:AT4G15233.1
TAIR:AT4G15233.1	Unigene:At.54333	ProteinID:DAA00882.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	RefSeq:NP_001190737.1	RefSeq:NP_001319945.1	RefSeq:NP_001329431.1
RefSeq:NP_001329434.1	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370
PO:PO:0000293	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF449	UniProt:Q7PC82	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00001D9704	SEG:seg	:	:

Description

ABCG42ABC transporter G family member 42 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC82]

Coordinates

chr4:+:8688250..8694482

Molecular Weight (calculated)

158231.0 Da

IEP (calculated)

8.478

GRAVY (calculated)

0.034

Length

1392 amino acids

Sequence
(BLAST)

0001: MTMSQTDGVE FASRNTNENG HDDDDQLRSQ WVAIERSPTF ERITTALFCK RDEKGKKSQR RVMDVSKLDD LDRRLFIDDL IRHVENDNHV LLQKIRKRID
0101: EVGIDLPKIE ARFSDLFVEA ECEVVYGKPI PTLWNAISSK LSRFMCSNQA KKISILKGVS GIIRPKRMTL LLGPPSCGKT TLLLALSGRL DPSLKTRGDI
0201: SYNGHLFSEF VPEKTSSYVS QNDLHIPELS VRETLDFSGC FQGTGSRLEM TKEISRREKL KGIVPDPDID AYMKAASIEG SKTNLQTDYI LKILGLTICA
0301: DTRVGDASRP GISGGQKRRL TTGEMIVGPI KTLFMDEISN GLDSSTTFQI LSCLQQFARL SEGTILVSLL QPAPETFELF DDLILMGEGK IIYHGPRDFV
0401: CSFFEDCGFK CPNRKSVAEF LQEVISRKDQ EQYWCHIEKT YCYVSIESFI EKFKKSDLGL ELQDRLSKTY DKSQTQKDGL CFRKYSLSNW DMLKACSRRE
0501: FLLMKRNSFV YVFKSGLLIF IGFIAMTVYL RTGSTRDSLH ANYLMGSLFF SLFKLLADGL PELTLTISRI AVFCKQKELY FYPAWAYAIP SAILKIPISF
0601: LESFLWTMLT YYVIGYSPEM GRFIRQFLIL FALHLSCISM FRAIAAVFRD FVVATTVGSI SIVLLSVFGG FIVRKPSMPS WLEWGFWLSP LSYAEIGLTA
0701: NEFFAPRWGK ITSENRTLGE QVLDARGLNF GNQSYWNAFG ALIGFTLFFN TVFALALTFL KTSQRSRVIV SHEKNTQSSE NDSKIASRFK NALPFEPLTF
0801: TFQDVQYIIE TPQGKKLQLL SGVTGAFKPG VLTALMGVSG AGKTTLLDVL SGRKTFGDIK GQIEVGGYVK VQDTFSRVSG YCEQFDIHSP NLTVQESLKY
0901: SAWLRLTSNI SSETKCAIVN EVLETIELEE IKDSIVGIPG ISGLTTEQRK RLTIAVELVS NPSIIFMDEP TTGLDARAAA IVMRAVKNIA ETGRTVVCTI
1001: HQPSIDIFEA FDELILMKNG GKIIYYGPLG QHSSKVIEYF MRIHGVPKLK ENSNPATWIL DITSKSSEDK LGVDLAQMYE ESTLFKENKM VIEQTRCTSL
1101: GSERLILSSR YAQTSWEQFK ACLWKQHLSY WRNPSYNLTR IIFMSFTCML CGILFWQKAK EINNQQDLFN VFGSMFTVVL FSGINNCSTV LFSVATERNV
1201: FYRERFSRMY NSWAYSLAQV LVEIPYSLFQ SIVYVIIVYP MVGYHWSVFK VFWSFYSIFC TLLIFNYFGM LLVVVTPNVH IAFTLRSSFY AIVNLFAGYV
1301: MPKPNIPRWW IWMYYLSPTS WVLNGLLTSQ YGDMEKEILA FGEKKKVSDF LEDYFGYRYD SLALVAVVLI AFPILLASLF AFFIGKLNFQ KK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.