Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G163700.1 | Wheat | cytosol, peroxisome, plasma membrane | 97.08 | 95.81 |
| TraesCS5B01G155400.3 | Wheat | plasma membrane | 95.33 | 95.73 |
| HORVU5Hr1G049490.3 | Barley | nucleus, plastid | 85.65 | 88.24 |
| TraesCS7B01G381200.2 | Wheat | plasma membrane | 82.17 | 82.92 |
| TraesCS7B01G381000.1 | Wheat | cytosol, nucleus, plasma membrane | 80.08 | 82.79 |
| GSMUA_Achr3P01060_001 | Banana | plasma membrane | 59.61 | 63.31 |
| VIT_14s0060g00470.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 60.93 | 60.43 |
| Solyc01g101070.2.1 | Tomato | plastid | 59.96 | 59.5 |
| GSMUA_Achr1P18390_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 61.98 | 59.21 |
| PGSC0003DMT400046986 | Potato | plasma membrane | 36.56 | 58.99 |
| CDY18456 | Canola | cytosol, nucleus, plasma membrane | 57.24 | 58.46 |
| CDY55440 | Canola | cytosol, nucleus, plasma membrane | 39.0 | 58.39 |
| CDY52757 | Canola | cytosol, peroxisome, plasma membrane | 58.5 | 58.29 |
| CDX74974 | Canola | cytosol | 57.17 | 58.1 |
| CDY07588 | Canola | cytosol, peroxisome, plasma membrane | 58.08 | 57.88 |
| CDX91350 | Canola | cytosol, peroxisome, plasma membrane | 56.75 | 57.68 |
| AT3G53480.1 | Thale cress | cytosol, peroxisome, plasma membrane | 58.15 | 57.59 |
| Bra005208.1-P | Field mustard | cytosol, nucleus, plasma membrane | 56.69 | 57.53 |
| TraesCS7B01G271500.1 | Wheat | cytosol | 24.58 | 57.49 |
| KRH02448 | Soybean | plasma membrane | 58.08 | 57.44 |
| Bra003137.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 58.43 | 56.84 |
| CDY63361 | Canola | plasma membrane | 15.67 | 56.53 |
| CDY06512 | Canola | cytosol, peroxisome, plasma membrane | 53.69 | 56.07 |
| CDX91351 | Canola | cytosol | 48.19 | 55.99 |
| Bra017198.1-P | Field mustard | mitochondrion | 57.31 | 55.91 |
| AT4G15233.1 | Thale cress | cytosol, peroxisome, plasma membrane | 53.97 | 55.68 |
| Bra012797.1-P | Field mustard | cytosol | 52.86 | 55.36 |
| CDX74973 | Canola | cytosol | 53.55 | 55.09 |
| CDY58247 | Canola | cytosol | 33.7 | 52.95 |
| CDY65557 | Canola | plasma membrane | 13.72 | 52.67 |
| CDY65558 | Canola | cytosol | 33.29 | 51.01 |
| TraesCS7B01G292700.1 | Wheat | plasma membrane | 50.21 | 50.42 |
| TraesCS6B01G205900.1 | Wheat | plasma membrane | 50.42 | 50.14 |
| TraesCS3B01G248400.1 | Wheat | cytosol, peroxisome, plasma membrane | 50.7 | 50.07 |
| TraesCS3B01G248500.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 50.49 | 50.03 |
| TraesCS2B01G149900.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.2 | 48.79 |
| TraesCS3B01G306400.2 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 49.86 | 48.51 |
| TraesCS5B01G183500.1 | Wheat | cytosol, nucleus, plasma membrane | 48.82 | 48.41 |
| TraesCS3B01G523700.1 | Wheat | mitochondrion | 36.07 | 48.41 |
| TraesCS3B01G524400.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.19 | 48.12 |
| TraesCS5B01G572600.1 | Wheat | plastid | 48.61 | 48.04 |
| TraesCS7B01G000200.1 | Wheat | plastid | 48.61 | 47.91 |
| TraesCS3B01G141700.2 | Wheat | golgi, unclear | 47.7 | 47.87 |
| TraesCS7B01G088800.1 | Wheat | plastid | 48.12 | 47.62 |
| TraesCS5B01G449500.1 | Wheat | plastid | 47.7 | 47.14 |
| TraesCS2B01G606700.2 | Wheat | plastid | 47.42 | 46.58 |
| TraesCS7B01G167100.1 | Wheat | cytosol, nucleus, plasma membrane | 42.9 | 45.63 |
| TraesCS4B01G331400.3 | Wheat | plasma membrane | 31.48 | 45.25 |
| TraesCS4B01G332300.3 | Wheat | cytosol, nucleus, plasma membrane | 41.85 | 44.65 |
| TraesCS5B01G517700.1 | Wheat | plasma membrane | 29.32 | 43.63 |
| TraesCS7B01G005200.1 | Wheat | plasma membrane | 39.48 | 42.92 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans |
| InterPro:ABC_trans_N | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 |
| PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF259 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS4B01G054700 | EnsemblPlants:TraesCS4B01G054700.1 | TIGR:cd03232 | TIGR:cd03233 | SEG:seg | : |
Description
No Description!
Coordinates
chr4B:-:43215084..43234486
Molecular Weight (calculated)
161923.0 Da
IEP (calculated)
7.508
GRAVY (calculated)
0.054
Length
1436 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSKVEMGEEE QDDRAVDDPE KKMNKASSAS TVPPLSSSSL REALSSTSSS SLREQHHDHD EEVELKWAAI ERLPTWDRLH ASLPLHANAT HPLEPVDVRR
0101: LGAVDRRELV HTLIADIHED NLRLLRHQRR RMDRVGVRQP TVEVRWRNLH VDAECQVVDG KPLPTLLNSA ISTFSLLTTM LGFNRNQERI HILKDVTGIL
0201: KPSRMTLLLG PPGCGKTILL LALAGKLNKS LKVTGEIDYN GVKLQDFVPE KTSAYIGQYD LHVPEMTVRE TLDFSARFQG VGSRAEIMKE VIRREKEAGI
0301: IPDPNIDTYM KAISVDGLER SMQTDYIMKI MGLDICADVL VGDAMRRGIS GGEKKRLTTG EMIVGPSKAL FMDEISTGLD SSTTFQIVSC LQQLAHISES
0401: TILVSLLQPA PETYQLFDDI ILMAEGQIVY HGPRSCIMSF FESCGFKCPG RKGDADFLQE VLSKKDQQQY WSRTEEGYNF VTVDQFCDKF KASQSGQNLA
0501: GELSKPYDES KGHKNALSFS IYSLSKWDLV KACFAREFLL MKRNAFIYIT KAIQLGLIAA ISGTGFLRTH MGVDRIHANY YMSSLFFALL LLTVNGFPEL
0601: AMAINRLPVF YKQRDYYFYP AWAYAIPSFI LKIPVSLVES VAWTSISYYL IGYTPEASRF FSQLLILFLI HTVTLSKFRC VASYCQTMVV ASICGTLTFL
0701: VMLLFGGFII PRGLTGNEFL APRWLEITLS GVTLGKRILM DQALDFSSYF YWISVGALIG FTLLFNVGFA IGLTIKSIPG SSRAIISRNK LATFGERNQD
0801: KDTENGMPNL QAETALTPNR TGRMVLPFTP LTISFQDVNY YVDTPAEMRE HGYMKRKLQL LHNITGAFQP GVLSALMGVT GAGKTTLLDV LAGRKTGGVI
0901: EGDIRIGGYP KIQQTFARIS GYCEQTDVHS PQITVGESVA YSAWLRLPPE IDSKTRNEFV NEVLETIELD EIRDSLVGVP GVNGLSTEQR KRLTIAVELV
1001: SNPSIIFMDE PTSGLDARAA AIVMRAVKNV ADTGRTVVCT IHQPSIDIFE AFDELMLMKR GGELIYAGPV GHHSCEVIQY FQAIPGVPRI KDNYNPSTWM
1101: LEVTSTSMEV QLGADFAQLY RESPMCKDKD RVVKRLSVPV PGMTDLHFGT RFPQKFQEQF KACLWKQCLS YWRTPSYNMV RFAFITFSCI FFGALFWQQG
1201: NINHINDQQS LFTILGCMYG ITLFAGINNC QSVMPFISVE RSVVYRERFA GMYSPWAYSF AQVAMEIPYV LMQVVLFMLI AYPMIGYAWT TAKFFWFMYT
1301: MFCTLLCFVY MGMVVVSITP NIQVASIFSS MFYTLQNLMS GFIMPAPQIP RWWIWFYYVS PLSWALRVLF TTQFGDYDDR MIDVFGETKS VPVFMKDYFG
1401: FRRDLLPLAA VILAAFPILL AVLFGYNISK LNFQRR
0101: LGAVDRRELV HTLIADIHED NLRLLRHQRR RMDRVGVRQP TVEVRWRNLH VDAECQVVDG KPLPTLLNSA ISTFSLLTTM LGFNRNQERI HILKDVTGIL
0201: KPSRMTLLLG PPGCGKTILL LALAGKLNKS LKVTGEIDYN GVKLQDFVPE KTSAYIGQYD LHVPEMTVRE TLDFSARFQG VGSRAEIMKE VIRREKEAGI
0301: IPDPNIDTYM KAISVDGLER SMQTDYIMKI MGLDICADVL VGDAMRRGIS GGEKKRLTTG EMIVGPSKAL FMDEISTGLD SSTTFQIVSC LQQLAHISES
0401: TILVSLLQPA PETYQLFDDI ILMAEGQIVY HGPRSCIMSF FESCGFKCPG RKGDADFLQE VLSKKDQQQY WSRTEEGYNF VTVDQFCDKF KASQSGQNLA
0501: GELSKPYDES KGHKNALSFS IYSLSKWDLV KACFAREFLL MKRNAFIYIT KAIQLGLIAA ISGTGFLRTH MGVDRIHANY YMSSLFFALL LLTVNGFPEL
0601: AMAINRLPVF YKQRDYYFYP AWAYAIPSFI LKIPVSLVES VAWTSISYYL IGYTPEASRF FSQLLILFLI HTVTLSKFRC VASYCQTMVV ASICGTLTFL
0701: VMLLFGGFII PRGLTGNEFL APRWLEITLS GVTLGKRILM DQALDFSSYF YWISVGALIG FTLLFNVGFA IGLTIKSIPG SSRAIISRNK LATFGERNQD
0801: KDTENGMPNL QAETALTPNR TGRMVLPFTP LTISFQDVNY YVDTPAEMRE HGYMKRKLQL LHNITGAFQP GVLSALMGVT GAGKTTLLDV LAGRKTGGVI
0901: EGDIRIGGYP KIQQTFARIS GYCEQTDVHS PQITVGESVA YSAWLRLPPE IDSKTRNEFV NEVLETIELD EIRDSLVGVP GVNGLSTEQR KRLTIAVELV
1001: SNPSIIFMDE PTSGLDARAA AIVMRAVKNV ADTGRTVVCT IHQPSIDIFE AFDELMLMKR GGELIYAGPV GHHSCEVIQY FQAIPGVPRI KDNYNPSTWM
1101: LEVTSTSMEV QLGADFAQLY RESPMCKDKD RVVKRLSVPV PGMTDLHFGT RFPQKFQEQF KACLWKQCLS YWRTPSYNMV RFAFITFSCI FFGALFWQQG
1201: NINHINDQQS LFTILGCMYG ITLFAGINNC QSVMPFISVE RSVVYRERFA GMYSPWAYSF AQVAMEIPYV LMQVVLFMLI AYPMIGYAWT TAKFFWFMYT
1301: MFCTLLCFVY MGMVVVSITP NIQVASIFSS MFYTLQNLMS GFIMPAPQIP RWWIWFYYVS PLSWALRVLF TTQFGDYDDR MIDVFGETKS VPVFMKDYFG
1401: FRRDLLPLAA VILAAFPILL AVLFGYNISK LNFQRR
0001: MGSSFRSSSS RNEHEDGGDE AEHALQWAEI QRLPTFKRLR SSLVDKYGEG TEKGKKVVDV TKLGAMERHL MIEKLIKHIE NDNLKLLKKI RRRMERVGVE
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKCYGEIS
0201: YNGHGLNEVV PQKTSAYISQ HDLHIAEMTT RETIDFSARC QGVGSRTDIM MEVSKREKDG GIIPDPEIDA YMKAISVKGL KRSLQTDYIL KILGLDICAE
0301: TLVGNAMKRG ISGGQKKRLT TAEMIVGPTK ALFMDEITNG LDSSTAFQII KSLQQVAHIT NATVFVSLLQ PAPESYDLFD DIVLMAEGKI VYHGPRDDVL
0401: KFFEECGFQC PERKGVADFL QEVISKKDQG QYWLHQNLPH SFVSVDTLSK RFKDLEIGRK IEEALSKPYD ISKTHKDALS FNVYSLPKWE LFRACISREF
0501: LLMKRNYFVY LFKTFQLVLA AIITMTVFIR TRMDIDIIHG NSYMSCLFFA TVVLLVDGIP ELSMTVQRLS VFYKQKQLCF YPAWAYAIPA TVLKIPLSFF
0601: ESLVWTCLTY YVIGYTPEPY RFFRQFMILF AVHFTSISMF RCIAAIFQTG VAAMTAGSFV MLITFVFAGF AIPYTDMPGW LKWGFWVNPI SYAEIGLSVN
0701: EFLAPRWQKM QPTNVTLGRT ILESRGLNYD DYMYWVSLSA LLGLTIIFNT IFTLALSFLK SPTSSRPMIS QDKLSELQGT KDSSVKKNKP LDSSIKTNED
0801: PGKMILPFKP LTITFQDLNY YVDVPVEMKG QGYNEKKLQL LSEITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGEIRISGFL KVQETFARVS
0901: GYCEQTDIHS PSITVEESLI YSAWLRLVPE INPQTKIRFV KQVLETIELE EIKDALVGVA GVSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIHIFE AFDELVLLKR GGRMIYSGPL GQHSSCVIEY FQNIPGVAKI RDKYNPATWM LEVTSESVET ELDMDFAKIY
1101: NESDLYKNNS ELVKELSKPD HGSSDLHFKR TFAQNWWEQF KSCLWKMSLS YWRSPSYNLM RIGHTFISSF IFGLLFWNQG KKIDTQQNLF TVLGAIYGLV
1201: LFVGINNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEIPYIFI QSAEFVIVIY PMIGFYASFS KVFWSLYAMF CNLLCFNYLA MFLISITPNF
1301: MVAAILQSLF FTTFNIFAGF LIPKPQIPKW WVWFYYITPT SWTLNLFFSS QYGDIHQKIN AFGETKTVAS FLEDYFGFHH DRLMITAIIL IAFPIALATM
1401: YAFFVAKLNF QKR
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKCYGEIS
0201: YNGHGLNEVV PQKTSAYISQ HDLHIAEMTT RETIDFSARC QGVGSRTDIM MEVSKREKDG GIIPDPEIDA YMKAISVKGL KRSLQTDYIL KILGLDICAE
0301: TLVGNAMKRG ISGGQKKRLT TAEMIVGPTK ALFMDEITNG LDSSTAFQII KSLQQVAHIT NATVFVSLLQ PAPESYDLFD DIVLMAEGKI VYHGPRDDVL
0401: KFFEECGFQC PERKGVADFL QEVISKKDQG QYWLHQNLPH SFVSVDTLSK RFKDLEIGRK IEEALSKPYD ISKTHKDALS FNVYSLPKWE LFRACISREF
0501: LLMKRNYFVY LFKTFQLVLA AIITMTVFIR TRMDIDIIHG NSYMSCLFFA TVVLLVDGIP ELSMTVQRLS VFYKQKQLCF YPAWAYAIPA TVLKIPLSFF
0601: ESLVWTCLTY YVIGYTPEPY RFFRQFMILF AVHFTSISMF RCIAAIFQTG VAAMTAGSFV MLITFVFAGF AIPYTDMPGW LKWGFWVNPI SYAEIGLSVN
0701: EFLAPRWQKM QPTNVTLGRT ILESRGLNYD DYMYWVSLSA LLGLTIIFNT IFTLALSFLK SPTSSRPMIS QDKLSELQGT KDSSVKKNKP LDSSIKTNED
0801: PGKMILPFKP LTITFQDLNY YVDVPVEMKG QGYNEKKLQL LSEITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGEIRISGFL KVQETFARVS
0901: GYCEQTDIHS PSITVEESLI YSAWLRLVPE INPQTKIRFV KQVLETIELE EIKDALVGVA GVSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIHIFE AFDELVLLKR GGRMIYSGPL GQHSSCVIEY FQNIPGVAKI RDKYNPATWM LEVTSESVET ELDMDFAKIY
1101: NESDLYKNNS ELVKELSKPD HGSSDLHFKR TFAQNWWEQF KSCLWKMSLS YWRSPSYNLM RIGHTFISSF IFGLLFWNQG KKIDTQQNLF TVLGAIYGLV
1201: LFVGINNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEIPYIFI QSAEFVIVIY PMIGFYASFS KVFWSLYAMF CNLLCFNYLA MFLISITPNF
1301: MVAAILQSLF FTTFNIFAGF LIPKPQIPKW WVWFYYITPT SWTLNLFFSS QYGDIHQKIN AFGETKTVAS FLEDYFGFHH DRLMITAIIL IAFPIALATM
1401: YAFFVAKLNF QKR
Arabidopsis Description
PDR5pleiotropic drug resistance 5 [Source:TAIR;Acc:AT2G37280]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.