Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55440 | Canola | cytosol, nucleus, plasma membrane | 68.21 | 100.0 |
| Bra017198.1-P | Field mustard | mitochondrion | 97.51 | 93.14 |
| CDX74974 | Canola | cytosol | 88.98 | 88.53 |
| CDX91350 | Canola | cytosol, peroxisome, plasma membrane | 88.41 | 87.97 |
| CDX91351 | Canola | cytosol | 74.68 | 84.95 |
| CDX74973 | Canola | cytosol | 84.07 | 84.67 |
| CDY52757 | Canola | cytosol, peroxisome, plasma membrane | 78.95 | 77.03 |
| CDY07588 | Canola | cytosol, peroxisome, plasma membrane | 78.95 | 77.03 |
| VIT_14s0060g00470.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 68.99 | 66.99 |
| PGSC0003DMT400046986 | Potato | plasma membrane | 41.18 | 65.06 |
| Solyc01g101070.2.1 | Tomato | plastid | 66.86 | 64.96 |
| CDY65389 | Canola | cytosol | 3.49 | 61.25 |
| GSMUA_Achr3P01060_001 | Banana | plasma membrane | 57.89 | 60.21 |
| CDY06512 | Canola | cytosol, peroxisome, plasma membrane | 57.54 | 58.84 |
| CDY63361 | Canola | plasma membrane | 16.43 | 58.04 |
| TraesCS5D01G163500.1 | Wheat | plasma membrane | 59.74 | 57.73 |
| TraesCS5A01G158300.1 | Wheat | plasma membrane | 59.67 | 57.58 |
| TraesCS5A01G158100.1 | Wheat | plasma membrane | 59.53 | 57.53 |
| TraesCS7D01G465900.2 | Wheat | cytosol, peroxisome, plasma membrane | 56.83 | 57.44 |
| TraesCS5D01G163700.1 | Wheat | cytosol, peroxisome, plasma membrane | 59.25 | 57.25 |
| TraesCS4B01G054700.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.46 | 57.24 |
| Zm00001d023392_P002 | Maize | cytosol, peroxisome, plasma membrane | 59.74 | 57.07 |
| TraesCS7A01G478500.1 | Wheat | cytosol, peroxisome, plasma membrane | 56.4 | 56.97 |
| GSMUA_Achr1P18390_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 60.81 | 56.89 |
| CDY58247 | Canola | cytosol | 36.91 | 56.78 |
| Os12t0512700-01 | Rice | cytosol, peroxisome | 30.87 | 56.73 |
| TraesCS5B01G155400.3 | Wheat | plasma membrane | 57.54 | 56.57 |
| HORVU5Hr1G049490.3 | Barley | nucleus, plastid | 56.05 | 56.53 |
| TraesCS7B01G381200.2 | Wheat | plasma membrane | 57.04 | 56.36 |
| TraesCS7B01G381000.1 | Wheat | cytosol, nucleus, plasma membrane | 55.33 | 56.01 |
| TraesCS4A01G384800.1 | Wheat | cytosol, nucleus, plasma membrane | 55.33 | 55.49 |
| CDY65557 | Canola | plasma membrane | 14.72 | 55.35 |
| OQU91497 | Sorghum | cytosol, nucleus, plasma membrane | 54.27 | 55.25 |
| CDY70099 | Canola | cytosol | 16.79 | 54.88 |
| CDY65558 | Canola | cytosol | 36.49 | 54.75 |
| CDY39621 | Canola | plastid | 52.7 | 51.6 |
| CDX79673 | Canola | cytosol, peroxisome, plasma membrane | 44.81 | 51.6 |
| CDX97743 | Canola | plasma membrane | 51.71 | 51.45 |
| CDY36534 | Canola | plastid | 52.49 | 51.43 |
| CDY69529 | Canola | plasma membrane | 26.1 | 51.4 |
| CDX67921 | Canola | plasma membrane, plastid | 50.64 | 51.22 |
| CDY20193 | Canola | plasma membrane, plastid | 49.57 | 50.29 |
| CDY36570 | Canola | cytosol, nucleus, plasma membrane, plastid | 50.5 | 50.25 |
| CDY30162 | Canola | plasma membrane | 31.72 | 50.17 |
| CDY39660 | Canola | cytosol, nucleus, plasma membrane | 50.28 | 49.96 |
| CDX83991 | Canola | plastid | 51.71 | 49.52 |
| CDY43723 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 50.5 | 48.86 |
| CDY48188 | Canola | cytosol, peroxisome, plasma membrane | 48.08 | 47.61 |
| CDX77057 | Canola | cytosol, peroxisome, plasma membrane | 47.94 | 47.46 |
| CDX97864 | Canola | cytosol, peroxisome, plasma membrane | 48.08 | 47.31 |
| CDX83314 | Canola | cytosol | 47.72 | 47.22 |
| CDY29713 | Canola | cytosol, peroxisome, plasma membrane | 47.94 | 47.17 |
| CDX95741 | Canola | cytosol | 47.58 | 47.08 |
| CDY68747 | Canola | plastid | 28.52 | 46.9 |
| CDY69102 | Canola | plastid | 28.31 | 46.71 |
| CDY64951 | Canola | cytosol, peroxisome, plasma membrane | 45.02 | 45.87 |
| Os12t0239900-01 | Rice | plasma membrane | 2.35 | 45.83 |
| CDX85303 | Canola | cytosol | 45.52 | 45.68 |
| CDX84561 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 49.36 | 42.55 |
| CDX71718 | Canola | cytosol | 1.35 | 33.93 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | GO:A0A078FZI6 | UniProt:A0A078FZI6 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 |
| InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans | InterPro:ABC_trans_N | InterPro:ABC_transporter-like | EnsemblPlants:CDY18456 | ProteinID:CDY18456 |
| ProteinID:CDY18456.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00005457001 |
| InterPro:IPR003439 | InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 |
| PFAM:PF14510 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF259 | SMART:SM00382 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | UniParc:UPI0004EEA1E9 | SEG:seg | : | : | : |
Description
BnaA04g21310DBnaA04g21310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZI6]
Coordinates
chrLK032085:-:566805..573858
Molecular Weight (calculated)
159284.0 Da
IEP (calculated)
7.888
GRAVY (calculated)
0.082
Length
1406 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSSFRSSSS RNEDEAEHAL QWAEIQRLPS FKQLRSSLVD EEGDDVEKGK RVVDVTKLGA MERRLMIEKL IKHIENDNLK LLKKIRRRID RVGVELPSIE
0101: VRYKHLSVEA ECEVVEGKAL PTLWNSLKHI FLELVKLSGV RTHEAKISIL NDVSGNINPG RLTLLLGPPG CGKTTLLKAL SGNLDKNLKI SGEISYNGHG
0201: LNEFVPQKTS AYISQHDLHI AEMTVRETID FSARCQGVGS RTDIMMEVSK REKDGGIIPD PDVDAYMKAI SVNGLKRSLQ TDYILKILGL DICAETLVGN
0301: AMKRGISGGQ KKRLTTGEMI VGPTKALFMD EITNGLDSST AFQIVKSLQQ LAHITDATVF VSLLQPAPES YDLFDDIVLM AEGKIVYHGP RGEVLRFFEE
0401: CGFRCPERKG VADFLQEVIS RKDQGQYWLH QDIPYTFLSV DALSRRFKEL EIGRKIEDAL SKPYDNSKTH KDALSFSDYS LPKWELFRAC ISREFLLMKR
0501: NSFVYLFKTF QLVLSAILTM TVFIRTRMGV DIIHGNSYMS CLFFATVVLL VDGLPELSMT VQRLAVFYKQ KQLCFYPAWA YAIPATVLKI PLSFFESLVW
0601: TCLTYYVIGY TPEVSRFLRQ FMMLFAVHFT SISIFRCIAA IFQTGVASMA AGSFAVLITF VFAGFAIPYT DMPGWLKWGF WVNPIGYAEI GLSVNEFLAP
0701: RWQQMQPTNV TLGRTILESR GLNYDDYMYW VSLCALLGQT LLFNTIFTLA LSFLKSPTTS RAMISKDKLS ELQGTKDSSL NKNKKAIDYT EDSAGKMALP
0801: FKPLTITFQD LNYYVDVPAE MRVQGYNEKK LQLLSDITGA FRPGVLTALM GISGAGKTTL LDVLAGRKTS GYIEGEIRIN GYFKVQKTFA RVSGYCEQTD
0901: IHSPNITVEE SLIYSAWLRL VPEIDHKTKI RFVKEVLETI ELEEIKDAMV GVPGQSGLSM EQRKRLTVAV ELVANPSIIF MDEPTTGLDA RAAAIVMRAV
1001: KNVAETGRTI VCTIHQPSID IFEAFDELVL LKRGGRMIYT GPLGQHSSHV IQYFESIPGV AKIKDNYNPA TWMLEVTSQS VEIELNMDFA KIYKESALYK
1101: SNSELVEQLS KPDIGSSDLH FERTFAQSWW EQFKSCLWKM SLSYWRSPAY NLMRIFQTLV SSLIFGLLFW KQGQKIDTQQ NLFTVLGAIY GLVIFLGVNN
1201: CTSALQYFET ERNVMYRERF AGMYSAFAFA LAQVVTEIPY IFIQSAEFVI IIYPMMGLYG SAYKVFWSLY SMFCNLLSFN YLALFLISIT PNFMLAAILQ
1301: SLFFIAFNLF AGFLIPLPQI PKWWVWLYYL IPPSWSLNVF FSSQYGDIHR EINAFGETTT VARFLEDYFG FHHDRLMTSA IILIAFPVAL ASMFAFFVAK
1401: LNFQKR
0101: VRYKHLSVEA ECEVVEGKAL PTLWNSLKHI FLELVKLSGV RTHEAKISIL NDVSGNINPG RLTLLLGPPG CGKTTLLKAL SGNLDKNLKI SGEISYNGHG
0201: LNEFVPQKTS AYISQHDLHI AEMTVRETID FSARCQGVGS RTDIMMEVSK REKDGGIIPD PDVDAYMKAI SVNGLKRSLQ TDYILKILGL DICAETLVGN
0301: AMKRGISGGQ KKRLTTGEMI VGPTKALFMD EITNGLDSST AFQIVKSLQQ LAHITDATVF VSLLQPAPES YDLFDDIVLM AEGKIVYHGP RGEVLRFFEE
0401: CGFRCPERKG VADFLQEVIS RKDQGQYWLH QDIPYTFLSV DALSRRFKEL EIGRKIEDAL SKPYDNSKTH KDALSFSDYS LPKWELFRAC ISREFLLMKR
0501: NSFVYLFKTF QLVLSAILTM TVFIRTRMGV DIIHGNSYMS CLFFATVVLL VDGLPELSMT VQRLAVFYKQ KQLCFYPAWA YAIPATVLKI PLSFFESLVW
0601: TCLTYYVIGY TPEVSRFLRQ FMMLFAVHFT SISIFRCIAA IFQTGVASMA AGSFAVLITF VFAGFAIPYT DMPGWLKWGF WVNPIGYAEI GLSVNEFLAP
0701: RWQQMQPTNV TLGRTILESR GLNYDDYMYW VSLCALLGQT LLFNTIFTLA LSFLKSPTTS RAMISKDKLS ELQGTKDSSL NKNKKAIDYT EDSAGKMALP
0801: FKPLTITFQD LNYYVDVPAE MRVQGYNEKK LQLLSDITGA FRPGVLTALM GISGAGKTTL LDVLAGRKTS GYIEGEIRIN GYFKVQKTFA RVSGYCEQTD
0901: IHSPNITVEE SLIYSAWLRL VPEIDHKTKI RFVKEVLETI ELEEIKDAMV GVPGQSGLSM EQRKRLTVAV ELVANPSIIF MDEPTTGLDA RAAAIVMRAV
1001: KNVAETGRTI VCTIHQPSID IFEAFDELVL LKRGGRMIYT GPLGQHSSHV IQYFESIPGV AKIKDNYNPA TWMLEVTSQS VEIELNMDFA KIYKESALYK
1101: SNSELVEQLS KPDIGSSDLH FERTFAQSWW EQFKSCLWKM SLSYWRSPAY NLMRIFQTLV SSLIFGLLFW KQGQKIDTQQ NLFTVLGAIY GLVIFLGVNN
1201: CTSALQYFET ERNVMYRERF AGMYSAFAFA LAQVVTEIPY IFIQSAEFVI IIYPMMGLYG SAYKVFWSLY SMFCNLLSFN YLALFLISIT PNFMLAAILQ
1301: SLFFIAFNLF AGFLIPLPQI PKWWVWLYYL IPPSWSLNVF FSSQYGDIHR EINAFGETTT VARFLEDYFG FHHDRLMTSA IILIAFPVAL ASMFAFFVAK
1401: LNFQKR
0001: MGSSFRSSSS RNEHEDGGDE AEHALQWAEI QRLPTFKRLR SSLVDKYGEG TEKGKKVVDV TKLGAMERHL MIEKLIKHIE NDNLKLLKKI RRRMERVGVE
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKCYGEIS
0201: YNGHGLNEVV PQKTSAYISQ HDLHIAEMTT RETIDFSARC QGVGSRTDIM MEVSKREKDG GIIPDPEIDA YMKAISVKGL KRSLQTDYIL KILGLDICAE
0301: TLVGNAMKRG ISGGQKKRLT TAEMIVGPTK ALFMDEITNG LDSSTAFQII KSLQQVAHIT NATVFVSLLQ PAPESYDLFD DIVLMAEGKI VYHGPRDDVL
0401: KFFEECGFQC PERKGVADFL QEVISKKDQG QYWLHQNLPH SFVSVDTLSK RFKDLEIGRK IEEALSKPYD ISKTHKDALS FNVYSLPKWE LFRACISREF
0501: LLMKRNYFVY LFKTFQLVLA AIITMTVFIR TRMDIDIIHG NSYMSCLFFA TVVLLVDGIP ELSMTVQRLS VFYKQKQLCF YPAWAYAIPA TVLKIPLSFF
0601: ESLVWTCLTY YVIGYTPEPY RFFRQFMILF AVHFTSISMF RCIAAIFQTG VAAMTAGSFV MLITFVFAGF AIPYTDMPGW LKWGFWVNPI SYAEIGLSVN
0701: EFLAPRWQKM QPTNVTLGRT ILESRGLNYD DYMYWVSLSA LLGLTIIFNT IFTLALSFLK SPTSSRPMIS QDKLSELQGT KDSSVKKNKP LDSSIKTNED
0801: PGKMILPFKP LTITFQDLNY YVDVPVEMKG QGYNEKKLQL LSEITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGEIRISGFL KVQETFARVS
0901: GYCEQTDIHS PSITVEESLI YSAWLRLVPE INPQTKIRFV KQVLETIELE EIKDALVGVA GVSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIHIFE AFDELVLLKR GGRMIYSGPL GQHSSCVIEY FQNIPGVAKI RDKYNPATWM LEVTSESVET ELDMDFAKIY
1101: NESDLYKNNS ELVKELSKPD HGSSDLHFKR TFAQNWWEQF KSCLWKMSLS YWRSPSYNLM RIGHTFISSF IFGLLFWNQG KKIDTQQNLF TVLGAIYGLV
1201: LFVGINNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEIPYIFI QSAEFVIVIY PMIGFYASFS KVFWSLYAMF CNLLCFNYLA MFLISITPNF
1301: MVAAILQSLF FTTFNIFAGF LIPKPQIPKW WVWFYYITPT SWTLNLFFSS QYGDIHQKIN AFGETKTVAS FLEDYFGFHH DRLMITAIIL IAFPIALATM
1401: YAFFVAKLNF QKR
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKCYGEIS
0201: YNGHGLNEVV PQKTSAYISQ HDLHIAEMTT RETIDFSARC QGVGSRTDIM MEVSKREKDG GIIPDPEIDA YMKAISVKGL KRSLQTDYIL KILGLDICAE
0301: TLVGNAMKRG ISGGQKKRLT TAEMIVGPTK ALFMDEITNG LDSSTAFQII KSLQQVAHIT NATVFVSLLQ PAPESYDLFD DIVLMAEGKI VYHGPRDDVL
0401: KFFEECGFQC PERKGVADFL QEVISKKDQG QYWLHQNLPH SFVSVDTLSK RFKDLEIGRK IEEALSKPYD ISKTHKDALS FNVYSLPKWE LFRACISREF
0501: LLMKRNYFVY LFKTFQLVLA AIITMTVFIR TRMDIDIIHG NSYMSCLFFA TVVLLVDGIP ELSMTVQRLS VFYKQKQLCF YPAWAYAIPA TVLKIPLSFF
0601: ESLVWTCLTY YVIGYTPEPY RFFRQFMILF AVHFTSISMF RCIAAIFQTG VAAMTAGSFV MLITFVFAGF AIPYTDMPGW LKWGFWVNPI SYAEIGLSVN
0701: EFLAPRWQKM QPTNVTLGRT ILESRGLNYD DYMYWVSLSA LLGLTIIFNT IFTLALSFLK SPTSSRPMIS QDKLSELQGT KDSSVKKNKP LDSSIKTNED
0801: PGKMILPFKP LTITFQDLNY YVDVPVEMKG QGYNEKKLQL LSEITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGEIRISGFL KVQETFARVS
0901: GYCEQTDIHS PSITVEESLI YSAWLRLVPE INPQTKIRFV KQVLETIELE EIKDALVGVA GVSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIHIFE AFDELVLLKR GGRMIYSGPL GQHSSCVIEY FQNIPGVAKI RDKYNPATWM LEVTSESVET ELDMDFAKIY
1101: NESDLYKNNS ELVKELSKPD HGSSDLHFKR TFAQNWWEQF KSCLWKMSLS YWRSPSYNLM RIGHTFISSF IFGLLFWNQG KKIDTQQNLF TVLGAIYGLV
1201: LFVGINNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEIPYIFI QSAEFVIVIY PMIGFYASFS KVFWSLYAMF CNLLCFNYLA MFLISITPNF
1301: MVAAILQSLF FTTFNIFAGF LIPKPQIPKW WVWFYYITPT SWTLNLFFSS QYGDIHQKIN AFGETKTVAS FLEDYFGFHH DRLMITAIIL IAFPIALATM
1401: YAFFVAKLNF QKR
Arabidopsis Description
PDR5pleiotropic drug resistance 5 [Source:TAIR;Acc:AT2G37280]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.