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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY65558 Canola cytosol 93.22 90.93
Bra012797.1-P Field mustard cytosol 95.19 63.46
CDY65389 Canola cytosol 5.25 60.0
CDY55440 Canola cytosol, nucleus, plasma membrane 56.13 53.49
AT4G15233.1 Thale cress cytosol, peroxisome, plasma membrane 81.18 53.3
CDY70099 Canola cytosol 23.96 50.93
Os12t0512700-01 Rice cytosol, peroxisome 42.01 50.2
CDY69102 Canola plastid 41.36 44.37
CDY68747 Canola plastid 41.36 44.21
CDY06512 Canola cytosol, peroxisome, plasma membrane 65.43 43.49
KRH02448 Soybean plasma membrane 61.6 38.77
CDY07588 Canola cytosol, peroxisome, plasma membrane 58.53 37.13
CDX74974 Canola cytosol 57.22 37.01
CDY52757 Canola cytosol, peroxisome, plasma membrane 58.21 36.92
CDY18456 Canola cytosol, nucleus, plasma membrane 56.78 36.91
CDX91350 Canola cytosol, peroxisome, plasma membrane 56.78 36.73
CDX91351 Canola cytosol 48.8 36.08
CDX71718 Canola cytosol 2.19 35.71
GSMUA_Achr3P01060_001 Banana plasma membrane 51.86 35.06
Zm00001d023392_P002 Maize cytosol, peroxisome, plasma membrane 55.47 34.44
TraesCS5D01G163700.1 Wheat cytosol, peroxisome, plasma membrane 54.6 34.3
GSMUA_Achr1P18390_001 Banana cytosol, nucleus, plasma membrane, plastid 56.13 34.13
TraesCS5D01G163500.1 Wheat plasma membrane 54.27 34.09
TraesCS7D01G465900.2 Wheat cytosol, peroxisome, plasma membrane 51.86 34.08
TraesCS7A01G478500.1 Wheat cytosol, peroxisome, plasma membrane 51.75 33.98
TraesCS5A01G158100.1 Wheat plasma membrane 53.94 33.88
TraesCS4B01G054700.1 Wheat cytosol, peroxisome, plasma membrane 52.95 33.7
TraesCS7B01G381200.2 Wheat plasma membrane 52.3 33.59
TraesCS5B01G155400.3 Wheat plasma membrane 52.3 33.43
TraesCS5A01G158300.1 Wheat plasma membrane 53.28 33.42
CDX74973 Canola cytosol 50.77 33.24
TraesCS7B01G381000.1 Wheat cytosol, nucleus, plasma membrane 50.33 33.12
HORVU5Hr1G049490.3 Barley nucleus, plastid 50.33 33.0
TraesCS4A01G384800.1 Wheat cytosol, nucleus, plasma membrane 50.33 32.81
OQU91497 Sorghum cytosol, nucleus, plasma membrane 48.36 32.01
CDX67921 Canola plasma membrane, plastid 47.7 31.37
CDY36534 Canola plastid 49.23 31.36
CDY39621 Canola plastid 49.23 31.34
CDY20193 Canola plasma membrane, plastid 47.37 31.24
CDX97743 Canola plasma membrane 48.25 31.21
CDY36570 Canola cytosol, nucleus, plasma membrane, plastid 48.03 31.07
CDY39660 Canola cytosol, nucleus, plasma membrane 47.92 30.95
CDX83991 Canola plastid 48.8 30.38
CDX97864 Canola cytosol, peroxisome, plasma membrane 46.61 29.81
CDY29713 Canola cytosol, peroxisome, plasma membrane 46.5 29.74
CDY43723 Canola cytosol, mitochondrion, peroxisome, plasma membrane 46.94 29.53
CDX83314 Canola cytosol 45.84 29.49
CDX95741 Canola cytosol 45.73 29.42
CDX79673 Canola cytosol, peroxisome, plasma membrane 39.06 29.24
CDY64951 Canola cytosol, peroxisome, plasma membrane 43.87 29.06
CDY48188 Canola cytosol, peroxisome, plasma membrane 44.75 28.8
CDX77057 Canola cytosol, peroxisome, plasma membrane 44.64 28.73
CDX85303 Canola cytosol 43.76 28.55
CDX84561 Canola cytosol, mitochondrion, peroxisome, plasma membrane 45.08 25.26
CDY30162 Canola plasma membrane 20.02 20.58
CDY69529 Canola plasma membrane 11.16 14.29
Os12t0239900-01 Rice plasma membrane 0.33 4.17
CDY65557 Canola plasma membrane 0.77 1.87
CDY63361 Canola plasma membrane 0.22 0.5
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078J396UniProt:A0A078J396InterPro:AAA+_ATPaseInterPro:ABC_2_trans
InterPro:ABC_trans_NInterPro:ABC_transporter-likeEnsemblPlants:CDY58247ProteinID:CDY58247ProteinID:CDY58247.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00023302001InterPro:IPR003439
InterPro:P-loop_NTPaseInterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510
PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF449SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelix
UniParc:UPI0004EE2F51:::::
Description
BnaA03g58030DBnaA03g58030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J396]
Coordinates
chrLK033649:-:29634..35314
Molecular Weight (calculated)
103065.0 Da
IEP (calculated)
8.142
GRAVY (calculated)
-0.080
Length
914 amino acids
Sequence
(BLAST)
001: MTTPQIAGDE NGNVGDEEVR SQWAAIERLP TFERITTALF WNRDEQGKRN ERRVMDVSKL EDLDRHLFID DLIRHVEDDN LRLLQKIKNR IDEVGLELPT
101: IEVRFSDLFV EAECEVVYGK PIPTLWNAIA SRISRVMCLK KEKSISILNG VSGIIRPKRM TLLLGPPSCG KTSLLLALAG RLDHSLKTTG KVSYNGHLLS
201: EFVPEKTSNY VSQNDLHIPE ITVRETLDFS GCFQGTGSRL ETMKEISRRE KLKGIIPDPD IDAYMKATSI EGSKTNLQTD YILKILGLSF CADTRVGDTS
301: RPGISGGQKR RLTTGEMIVG PIKTLFMDEI SNGLDSSTTF QIVSCLQHYA LLSEGTIVVS LLQPAPETFD LFDDVILMGE GKIIYIGPRD YICRFFEDCG
401: FKCPTRKSVA EFLQEVISRK DQEQYWCHID KPYSYVSIDS FIERFKKSEL GLQQQEELSK TPDKSQAQKD ALCSRKYSLS NWEMLKACSR REFLLMKRNS
501: FVYVFKSGLL ICIGSITMTV YLRTGSKRDL VHANYLMGSL FFSIFKMLAD GIPELTLTIS RLSVFYKQKE LYLYPAWAYA VPSAILKIPI SVLEAFMWTS
601: LTYYVIGYSP DIVRFFRQFL IFFALHLSCI SMFRAIAATF RDFVLATTMG SVSIVLLSLF GGFVLRKPSM PAWLQWGFWL SPLSYAEIGL TSNEFFSTRW
701: SQTTSGNRTL GEEVLDARGL NFGDQSYWGA FGALIGFTFF FNVVFVLALT FLTTSNRSRA IVSSDDDNAQ SSGNHTKSSS KIATQSKNAL PFKPLTFTFQ
801: DVRYFVQTPQ GKKVQLLSNV TGAFKPGVLT ALMGVSGAGK TTLMDVLSGR KTRGDIEGEI QVGGYRKVQE TFARVSGYCE QFDIHSPNLT IEESLEYSAW
901: FDFLLASTLK QRVQ
Best Arabidopsis Sequence Match ( AT4G15233.1 )
(BLAST)
0001: MTMSQTDGVE FASRNTNENG HDDDDQLRSQ WVAIERSPTF ERITTALFCK RDEKGKKSQR RVMDVSKLDD LDRRLFIDDL IRHVENDNHV LLQKIRKRID
0101: EVGIDLPKIE ARFSDLFVEA ECEVVYGKPI PTLWNAISSK LSRFMCSNQA KKISILKGVS GIIRPKRMTL LLGPPSCGKT TLLLALSGRL DPSLKTRGDI
0201: SYNGHLFSEF VPEKTSSYVS QNDLHIPELS VRETLDFSGC FQGTGSRLEM TKEISRREKL KGIVPDPDID AYMKAASIEG SKTNLQTDYI LKILGLTICA
0301: DTRVGDASRP GISGGQKRRL TTGEMIVGPI KTLFMDEISN GLDSSTTFQI LSCLQQFARL SEGTILVSLL QPAPETFELF DDLILMGEGK IIYHGPRDFV
0401: CSFFEDCGFK CPNRKSVAEF LQEVISRKDQ EQYWCHIEKT YCYVSIESFI EKFKKSDLGL ELQDRLSKTY DKSQTQKDGL CFRKYSLSNW DMLKACSRRE
0501: FLLMKRNSFV YVFKSGLLIF IGFIAMTVYL RTGSTRDSLH ANYLMGSLFF SLFKLLADGL PELTLTISRI AVFCKQKELY FYPAWAYAIP SAILKIPISF
0601: LESFLWTMLT YYVIGYSPEM GRFIRQFLIL FALHLSCISM FRAIAAVFRD FVVATTVGSI SIVLLSVFGG FIVRKPSMPS WLEWGFWLSP LSYAEIGLTA
0701: NEFFAPRWGK ITSENRTLGE QVLDARGLNF GNQSYWNAFG ALIGFTLFFN TVFALALTFL KTSQRSRVIV SHEKNTQSSE NDSKIASRFK NALPFEPLTF
0801: TFQDVQYIIE TPQGKKLQLL SGVTGAFKPG VLTALMGVSG AGKTTLLDVL SGRKTFGDIK GQIEVGGYVK VQDTFSRVSG YCEQFDIHSP NLTVQESLKY
0901: SAWLRLTSNI SSETKCAIVN EVLETIELEE IKDSIVGIPG ISGLTTEQRK RLTIAVELVS NPSIIFMDEP TTGLDARAAA IVMRAVKNIA ETGRTVVCTI
1001: HQPSIDIFEA FDELILMKNG GKIIYYGPLG QHSSKVIEYF MRIHGVPKLK ENSNPATWIL DITSKSSEDK LGVDLAQMYE ESTLFKENKM VIEQTRCTSL
1101: GSERLILSSR YAQTSWEQFK ACLWKQHLSY WRNPSYNLTR IIFMSFTCML CGILFWQKAK EINNQQDLFN VFGSMFTVVL FSGINNCSTV LFSVATERNV
1201: FYRERFSRMY NSWAYSLAQV LVEIPYSLFQ SIVYVIIVYP MVGYHWSVFK VFWSFYSIFC TLLIFNYFGM LLVVVTPNVH IAFTLRSSFY AIVNLFAGYV
1301: MPKPNIPRWW IWMYYLSPTS WVLNGLLTSQ YGDMEKEILA FGEKKKVSDF LEDYFGYRYD SLALVAVVLI AFPILLASLF AFFIGKLNFQ KK
Arabidopsis Description
ABCG42ABC transporter G family member 42 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC82]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.