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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005208.1-P Field mustard cytosol, nucleus, plasma membrane 98.3 98.16
CDX91350 Canola cytosol, peroxisome, plasma membrane 98.02 98.02
CDY18456 Canola cytosol, nucleus, plasma membrane 88.53 88.98
CDY55440 Canola cytosol, nucleus, plasma membrane 59.8 88.11
CDX91351 Canola cytosol 75.94 86.81
CDX74973 Canola cytosol 85.0 86.03
CDY07588 Canola cytosol, peroxisome, plasma membrane 80.11 78.56
CDY52757 Canola cytosol, peroxisome, plasma membrane 79.83 78.28
VIT_14s0060g00470.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 67.73 66.09
Solyc01g101070.2.1 Tomato plastid 66.17 64.62
PGSC0003DMT400046986 Potato plasma membrane 40.55 64.38
GSMUA_Achr3P01060_001 Banana plasma membrane 56.19 58.73
CDY63361 Canola plasma membrane 16.42 58.29
CDY65389 Canola cytosol 3.26 57.5
TraesCS5D01G163500.1 Wheat plasma membrane 59.16 57.46
CDY06512 Canola cytosol, peroxisome, plasma membrane 55.91 57.45
TraesCS5A01G158300.1 Wheat plasma membrane 59.16 57.38
TraesCS5D01G163700.1 Wheat cytosol, peroxisome, plasma membrane 59.02 57.32
Os12t0512700-01 Rice cytosol, peroxisome 31.0 57.25
TraesCS5A01G158100.1 Wheat plasma membrane 58.95 57.25
CDY58247 Canola cytosol 37.01 57.22
TraesCS4B01G054700.1 Wheat cytosol, peroxisome, plasma membrane 58.1 57.17
Zm00001d023392_P002 Maize cytosol, peroxisome, plasma membrane 59.45 57.07
TraesCS7D01G465900.2 Wheat cytosol, peroxisome, plasma membrane 56.05 56.94
TraesCS5B01G155400.3 Wheat plasma membrane 57.04 56.36
GSMUA_Achr1P18390_001 Banana cytosol, nucleus, plasma membrane, plastid 59.87 56.29
TraesCS7A01G478500.1 Wheat cytosol, peroxisome, plasma membrane 55.41 56.25
HORVU5Hr1G049490.3 Barley nucleus, plastid 55.34 56.1
TraesCS7B01G381200.2 Wheat plasma membrane 56.33 55.94
CDY65557 Canola plasma membrane 14.72 55.62
TraesCS7B01G381000.1 Wheat cytosol, nucleus, plasma membrane 54.56 55.51
OQU91497 Sorghum cytosol, nucleus, plasma membrane 54.14 55.39
TraesCS4A01G384800.1 Wheat cytosol, nucleus, plasma membrane 54.56 54.99
CDY65558 Canola cytosol 36.23 54.64
CDY70099 Canola cytosol 16.49 54.19
CDY69529 Canola plasma membrane 26.19 51.82
CDX97743 Canola plasma membrane 51.73 51.73
CDY39621 Canola plastid 52.23 51.39
CDX67921 Canola plasma membrane, plastid 50.39 51.22
CDY36534 Canola plastid 52.02 51.22
CDX79673 Canola cytosol, peroxisome, plasma membrane 44.23 51.19
CDY20193 Canola plasma membrane, plastid 49.68 50.65
CDY30162 Canola plasma membrane 31.78 50.51
CDY36570 Canola cytosol, nucleus, plasma membrane, plastid 50.32 50.32
CDY39660 Canola cytosol, nucleus, plasma membrane 50.18 50.11
CDX83991 Canola plastid 51.31 49.39
CDY43723 Canola cytosol, mitochondrion, peroxisome, plasma membrane 49.68 48.31
CDX77057 Canola cytosol, peroxisome, plasma membrane 48.27 48.03
CDY48188 Canola cytosol, peroxisome, plasma membrane 48.27 48.03
CDX97864 Canola cytosol, peroxisome, plasma membrane 48.05 47.52
CDY29713 Canola cytosol, peroxisome, plasma membrane 47.91 47.38
CDX83314 Canola cytosol 47.56 47.29
CDX95741 Canola cytosol 47.56 47.29
CDY68747 Canola plastid 28.03 46.32
CDY69102 Canola plastid 27.81 46.13
CDY64951 Canola cytosol, peroxisome, plasma membrane 44.87 45.94
CDX85303 Canola cytosol 45.36 45.75
Os12t0239900-01 Rice plasma membrane 2.26 44.44
CDX84561 Canola cytosol, mitochondrion, peroxisome, plasma membrane 48.83 42.31
CDX71718 Canola cytosol 1.42 35.71
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078CFS5InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1InterPro:ABCG_PDR_2
InterPro:ABC_2_transInterPro:ABC_trans_NInterPro:ABC_transporter-likeEnsemblPlants:CDX74974ProteinID:CDX74974ProteinID:CDX74974.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0016020GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00116988001InterPro:IPR003439InterPro:P-loop_NTPase
InterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510PFscan:PS50893
PANTHER:PTHR19241PANTHER:PTHR19241:SF259SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EDBCD0
SEG:seg:::::
Description
BnaA05g07200D
Coordinates
chrLK031802:-:1727490..1734522
Molecular Weight (calculated)
159773.0 Da
IEP (calculated)
8.296
GRAVY (calculated)
0.064
Length
1413 amino acids
Sequence
(BLAST)
0001: MDGEELRMEL SDIKKSTGTS FRSSSSSSNE HEAEAEHALQ WAEIQRLPTF KRLRSSLKGK KVADVTKLGA MERHLMIENL IKHIENDNLK LLKKIRKRMD
0101: RVGVAFPNIE VRYEHLSVEA ECEVVEGKAL PTLWNSLKRV FLELVKLSGV RTREAKIRIL NDVNGIINPG RLTLLLGPPG CGKTTLLKAL SGNLDKNLKC
0201: SGEISYNGHQ LNEFVPQKTS AYISQQDLHI AEMTVRETID FSARCQGVAS RTDIMMEVSK REKDGGIIPD PEVDAYMKAI SVKGLKKNLQ TDYILKVLGL
0301: DLCAETLVGN AMKRGISGGQ KKRLTTAEMI VGPTKALFMD EITNGLDSST AFQIVKSLQQ LAHITDATVL VSLLQPAPES YDLFDDIVLM AEGKIVYHGP
0401: RGEVLNFFEE CGFRCPERKG VADFLQEVIS KKDQRQYWMH QDLPYRFVSV DTFSKRFKDL EIGRKLEEAL SKPYDKSKPH KDALSSNAYS LPKWELFRAC
0501: ISREFLLMKR NYFVYLFKTF QLVLSAVITM TVFIRTRMGI DIVHGNSYMS CLFFGITVLL IDGIPEISMT VQRLAVFYKQ KQLCFYPAWA YAIPATVLKV
0601: PLSFIESLVW TCLTYYVIGY TPEVSRFLRQ FIMLFAVHFT SISMFRCIAS IFQTGVASMA AGSFAILATF VFAGFAIPYT DMPGWLKWGF WVNPVSYAEI
0701: GLSVNEFLAP RWQQMQPTNV TLGRTILESR GLNYDDYMYW VSLGALLGQT IIFNIIFTLA LSFLKSPTTS RAMISQEKLL ELQGTKDSSV KQKKSTETNE
0801: DSGKMVLPFK PLTITFQDLN YYVDVPVMRG QGYAEKKLQL LSNITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGDIKISGYR KVQETFARVS
0901: GYCEQTDIHS PNITVEESLI YSAWLRLVPE IDPETKIRFV KQVLETIELE EIKDAMVGVA GQSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIDIFE AFDELVLLKR GGRMIYTGPL GQHSSHVIKY FESIPGVTKI KDNYNPATWM LEVTSQSIET ELNIDFAKIY
1101: NESDLYKSNS ELAAELSKPD TGSTDLHFER TFAQSWWGQF KSCLWKMSLS YWRSPSYNLM RIGHTLISSL IFGVLFWKQG QKIDTQQNLF TVLGAIYGLV
1201: LFLGVNNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEVPYIFI QSAEFVIVIY PMMGLYASAY KVFWSLYSMF CNLLCLNYLA MFLISVTPNF
1301: MVAAILQSLF FVAFNLFAGF LIPLPQIPKW WVWLYYLAPT SWTLNVIFSS QYGDIHETID AFGESTTVAR FLEDYFGFHH DRLIFSAIIL IAFPIALASM
1401: FAFFVAKLNF QKR
Best Arabidopsis Sequence Match ( AT2G37280.1 )
(BLAST)
0001: MGSSFRSSSS RNEHEDGGDE AEHALQWAEI QRLPTFKRLR SSLVDKYGEG TEKGKKVVDV TKLGAMERHL MIEKLIKHIE NDNLKLLKKI RRRMERVGVE
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKCYGEIS
0201: YNGHGLNEVV PQKTSAYISQ HDLHIAEMTT RETIDFSARC QGVGSRTDIM MEVSKREKDG GIIPDPEIDA YMKAISVKGL KRSLQTDYIL KILGLDICAE
0301: TLVGNAMKRG ISGGQKKRLT TAEMIVGPTK ALFMDEITNG LDSSTAFQII KSLQQVAHIT NATVFVSLLQ PAPESYDLFD DIVLMAEGKI VYHGPRDDVL
0401: KFFEECGFQC PERKGVADFL QEVISKKDQG QYWLHQNLPH SFVSVDTLSK RFKDLEIGRK IEEALSKPYD ISKTHKDALS FNVYSLPKWE LFRACISREF
0501: LLMKRNYFVY LFKTFQLVLA AIITMTVFIR TRMDIDIIHG NSYMSCLFFA TVVLLVDGIP ELSMTVQRLS VFYKQKQLCF YPAWAYAIPA TVLKIPLSFF
0601: ESLVWTCLTY YVIGYTPEPY RFFRQFMILF AVHFTSISMF RCIAAIFQTG VAAMTAGSFV MLITFVFAGF AIPYTDMPGW LKWGFWVNPI SYAEIGLSVN
0701: EFLAPRWQKM QPTNVTLGRT ILESRGLNYD DYMYWVSLSA LLGLTIIFNT IFTLALSFLK SPTSSRPMIS QDKLSELQGT KDSSVKKNKP LDSSIKTNED
0801: PGKMILPFKP LTITFQDLNY YVDVPVEMKG QGYNEKKLQL LSEITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGEIRISGFL KVQETFARVS
0901: GYCEQTDIHS PSITVEESLI YSAWLRLVPE INPQTKIRFV KQVLETIELE EIKDALVGVA GVSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIHIFE AFDELVLLKR GGRMIYSGPL GQHSSCVIEY FQNIPGVAKI RDKYNPATWM LEVTSESVET ELDMDFAKIY
1101: NESDLYKNNS ELVKELSKPD HGSSDLHFKR TFAQNWWEQF KSCLWKMSLS YWRSPSYNLM RIGHTFISSF IFGLLFWNQG KKIDTQQNLF TVLGAIYGLV
1201: LFVGINNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEIPYIFI QSAEFVIVIY PMIGFYASFS KVFWSLYAMF CNLLCFNYLA MFLISITPNF
1301: MVAAILQSLF FTTFNIFAGF LIPKPQIPKW WVWFYYITPT SWTLNLFFSS QYGDIHQKIN AFGETKTVAS FLEDYFGFHH DRLMITAIIL IAFPIALATM
1401: YAFFVAKLNF QKR
Arabidopsis Description
PDR5pleiotropic drug resistance 5 [Source:TAIR;Acc:AT2G37280]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.