CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18456	Canola	cytosol, nucleus, plasma membrane	100.0	68.21
Bra017198.1-P	Field mustard	mitochondrion	97.5	63.52
CDY65389	Canola	cytosol	5.11	61.25
CDX74974	Canola	cytosol	88.11	59.8
CDX91350	Canola	cytosol, peroxisome, plasma membrane	87.38	59.31
CDX91351	Canola	cytosol	74.04	57.44
CDX74973	Canola	cytosol	82.06	56.38
Os12t0512700-01	Rice	cytosol, peroxisome	44.94	56.34
CDY58247	Canola	cytosol	53.49	56.13
CDY70099	Canola	cytosol	24.61	54.88
CDY65558	Canola	cytosol	52.87	54.11
CDY52757	Canola	cytosol, peroxisome, plasma membrane	79.87	53.16
CDY07588	Canola	cytosol, peroxisome, plasma membrane	79.77	53.09
CDY69102	Canola	plastid	41.5	46.71
CDY68747	Canola	plastid	41.5	46.55
VIT_14s0060g00470.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	70.07	46.41
Solyc01g101070.2.1	Tomato	plastid	68.09	45.13
GSMUA_Achr3P01060_001	Banana	plasma membrane	55.68	39.5
TraesCS5D01G163500.1	Wheat	plasma membrane	59.75	39.38
TraesCS5A01G158100.1	Wheat	plasma membrane	59.75	39.38
CDY06512	Canola	cytosol, peroxisome, plasma membrane	56.2	39.2
TraesCS5D01G163700.1	Wheat	cytosol, peroxisome, plasma membrane	59.44	39.18
GSMUA_Achr1P18390_001	Banana	cytosol, nucleus, plasma membrane, plastid	61.31	39.12
TraesCS4B01G054700.1	Wheat	cytosol, peroxisome, plasma membrane	58.39	39.0
TraesCS7D01G465900.2	Wheat	cytosol, peroxisome, plasma membrane	56.52	38.96
TraesCS5A01G158300.1	Wheat	plasma membrane	59.12	38.92
Zm00001d023392_P002	Maize	cytosol, peroxisome, plasma membrane	59.33	38.65
TraesCS7A01G478500.1	Wheat	cytosol, peroxisome, plasma membrane	56.0	38.58
TraesCS5B01G155400.3	Wheat	plasma membrane	57.35	38.46
TraesCS7B01G381200.2	Wheat	plasma membrane	56.62	38.16
HORVU5Hr1G049490.3	Barley	nucleus, plastid	54.85	37.73
TraesCS7B01G381000.1	Wheat	cytosol, nucleus, plasma membrane	54.54	37.65
TraesCS4A01G384800.1	Wheat	cytosol, nucleus, plasma membrane	54.74	37.45
OQU91497	Sorghum	cytosol, nucleus, plasma membrane	53.91	37.44
CDY39621	Canola	plastid	52.45	35.03
CDY20193	Canola	plasma membrane, plastid	50.57	34.99
CDY36534	Canola	plastid	52.14	34.84
CDX97743	Canola	plasma membrane	51.2	34.75
CDX67921	Canola	plasma membrane, plastid	49.43	34.1
CDX71718	Canola	cytosol	1.98	33.93
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	49.74	33.76
CDY43723	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	51.09	33.72
CDY39660	Canola	cytosol, nucleus, plasma membrane	49.53	33.57
CDX79673	Canola	cytosol, peroxisome, plasma membrane	42.54	33.42
CDX83991	Canola	plastid	51.09	33.38
PGSC0003DMT400046986	Potato	plasma membrane	30.45	32.81
CDX97864	Canola	cytosol, peroxisome, plasma membrane	47.76	32.05
CDY29713	Canola	cytosol, peroxisome, plasma membrane	47.65	31.98
CDX83314	Canola	cytosol	47.03	31.74
CDX95741	Canola	cytosol	46.92	31.67
CDY64951	Canola	cytosol, peroxisome, plasma membrane	45.15	31.38
CDY48188	Canola	cytosol, peroxisome, plasma membrane	46.09	31.13
CDX85303	Canola	cytosol	45.36	31.05
CDX77057	Canola	cytosol, peroxisome, plasma membrane	45.88	30.99
CDX84561	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	49.22	28.94
CDY30162	Canola	plasma membrane	22.0	23.73
CDY69529	Canola	plasma membrane	13.45	18.07
Os12t0239900-01	Rice	plasma membrane	0.0	0.0
CDY63361	Canola	plasma membrane	0.0	0.0
CDY65557	Canola	plasma membrane	0.0	0.0

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078J130	UniProt:A0A078J130	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1
InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	EnsemblPlants:CDY55440	ProteinID:CDY55440	ProteinID:CDY55440.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00016839001	InterPro:IPR003439
InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF259	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI0004EE7675	SEG:seg	:	:	:	:

Description

BnaA04g29240DBnaA04g29240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J130]

Coordinates

chrLK033402:+:57612..62331

Molecular Weight (calculated)

107871.0 Da

IEP (calculated)

8.102

GRAVY (calculated)

-0.028

Length

959 amino acids

Sequence
(BLAST)

001: MGSSFRSSSS RNEDEAEHAL QWAEIQRLPS FKQLRSSLVD EEGDDVEKGK RVVDVTKLGA MERRLMIEKL IKHIENDNLK LLKKIRRRID RVGVELPSIE
101: VRYKHLSVEA ECEVVEGKAL PTLWNSLKHI FLELVKLSGV RTHEAKISIL NDVSGNINPG RLTLLLGPPG CGKTTLLKAL SGNLDKNLKI SGEISYNGHG
201: LNEFVPQKTS AYISQHDLHI AEMTVRETID FSARCQGVGS RTDIMMEVSK REKDGGIIPD PDVDAYMKAI SVNGLKRSLQ TDYILKILGL DICAETLVGN
301: AMKRGISGGQ KKRLTTGEMI VGPTKALFMD EITNGLDSST AFQIVKSLQQ LAHITDATVF VSLLQPAPES YDLFDDIVLM AEGKIVYHGP RGEVLRFFEE
401: CGFRCPERKG VADFLQEVIS RKDQGQYWLH QDIPYTFLSV DALSRRFKEL EIGRKIEDAL SKPYDNSKTH KDALSFSDYS LPKWELFRAC ISREFLLMKR
501: NSFVYLFKTF QLVLSAILTM TVFIRTRMGV DIIHGNSYMS CLFFATVVLL VDGLPELSMT VQRLAVFYKQ KQLCFYPAWA YAIPATVLKI PLSFFESLVW
601: TCLTYYVIGY TPEVSRFLRQ FMMLFAVHFT SISIFRCIAA IFQTGVASMA AGSFAVLITF VFAGFAIPYT DMPGWLKWGF WVNPIGYAEI GLSVNEFLAP
701: RWQQMQPTNV TLGRTILESR GLNYDDYMYW VSLCALLGQT LLFNTIFTLA LSFLKSPTTS RAMISKDKLS ELQGTKDSSL NKNKKAIDYT EDSAGKMALP
801: FKPLTITFQD LNYYVDVPAE MRVQGYNEKK LQLLSDITGA FRPGVLTALM GISGAGKTTL LDVLAGRKTS GYIEGEIRIN GYFKVQKTFA RVSGYCEQTD
901: IHSPNITVEE SLIYSAWLRL VPEIDHKTKI RFVKEVLETI ELEEIKDAMV GVPGQSGLS

Best Arabidopsis Sequence Match ( AT2G37280.1 )
(BLAST)

0001: MGSSFRSSSS RNEHEDGGDE AEHALQWAEI QRLPTFKRLR SSLVDKYGEG TEKGKKVVDV TKLGAMERHL MIEKLIKHIE NDNLKLLKKI RRRMERVGVE
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKCYGEIS
0201: YNGHGLNEVV PQKTSAYISQ HDLHIAEMTT RETIDFSARC QGVGSRTDIM MEVSKREKDG GIIPDPEIDA YMKAISVKGL KRSLQTDYIL KILGLDICAE
0301: TLVGNAMKRG ISGGQKKRLT TAEMIVGPTK ALFMDEITNG LDSSTAFQII KSLQQVAHIT NATVFVSLLQ PAPESYDLFD DIVLMAEGKI VYHGPRDDVL
0401: KFFEECGFQC PERKGVADFL QEVISKKDQG QYWLHQNLPH SFVSVDTLSK RFKDLEIGRK IEEALSKPYD ISKTHKDALS FNVYSLPKWE LFRACISREF
0501: LLMKRNYFVY LFKTFQLVLA AIITMTVFIR TRMDIDIIHG NSYMSCLFFA TVVLLVDGIP ELSMTVQRLS VFYKQKQLCF YPAWAYAIPA TVLKIPLSFF
0601: ESLVWTCLTY YVIGYTPEPY RFFRQFMILF AVHFTSISMF RCIAAIFQTG VAAMTAGSFV MLITFVFAGF AIPYTDMPGW LKWGFWVNPI SYAEIGLSVN
0701: EFLAPRWQKM QPTNVTLGRT ILESRGLNYD DYMYWVSLSA LLGLTIIFNT IFTLALSFLK SPTSSRPMIS QDKLSELQGT KDSSVKKNKP LDSSIKTNED
0801: PGKMILPFKP LTITFQDLNY YVDVPVEMKG QGYNEKKLQL LSEITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGEIRISGFL KVQETFARVS
0901: GYCEQTDIHS PSITVEESLI YSAWLRLVPE INPQTKIRFV KQVLETIELE EIKDALVGVA GVSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIHIFE AFDELVLLKR GGRMIYSGPL GQHSSCVIEY FQNIPGVAKI RDKYNPATWM LEVTSESVET ELDMDFAKIY
1101: NESDLYKNNS ELVKELSKPD HGSSDLHFKR TFAQNWWEQF KSCLWKMSLS YWRSPSYNLM RIGHTFISSF IFGLLFWNQG KKIDTQQNLF TVLGAIYGLV
1201: LFVGINNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEIPYIFI QSAEFVIVIY PMIGFYASFS KVFWSLYAMF CNLLCFNYLA MFLISITPNF
1301: MVAAILQSLF FTTFNIFAGF LIPKPQIPKW WVWFYYITPT SWTLNLFFSS QYGDIHQKIN AFGETKTVAS FLEDYFGFHH DRLMITAIIL IAFPIALATM
1401: YAFFVAKLNF QKR

Arabidopsis Description

PDR5pleiotropic drug resistance 5 [Source:TAIR;Acc:AT2G37280]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.