Factsheet for Solyc01g101070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plasma membrane 2
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046986	Potato	plasma membrane	59.92	97.42
VIT_14s0060g00470.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	73.74	73.69
CDY55440	Canola	cytosol, nucleus, plasma membrane	45.13	68.09
AT3G53480.1	Thale cress	cytosol, peroxisome, plasma membrane	67.45	67.31
CDY18456	Canola	cytosol, nucleus, plasma membrane	64.96	66.86
CDY07588	Canola	cytosol, peroxisome, plasma membrane	66.55	66.83
CDY52757	Canola	cytosol, peroxisome, plasma membrane	66.48	66.76
CDX74974	Canola	cytosol	64.62	66.17
CDX91350	Canola	cytosol, peroxisome, plasma membrane	64.27	65.82
Bra005208.1-P	Field mustard	cytosol, nucleus, plasma membrane	64.34	65.8
Bra003137.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.48	65.18
Bra017198.1-P	Field mustard	mitochondrion	65.72	64.61
CDX91351	Canola	cytosol	54.53	63.84
CDX74973	Canola	cytosol	61.02	63.25
GSMUA_Achr3P01060_001	Banana	plasma membrane	58.53	62.65
TraesCS5D01G163500.1	Wheat	plasma membrane	61.02	60.69
TraesCS5A01G158100.1	Wheat	plasma membrane	60.75	60.41
TraesCS5A01G158300.1	Wheat	plasma membrane	60.47	60.05
TraesCS7D01G465900.2	Wheat	cytosol, peroxisome, plasma membrane	57.71	60.03
TraesCS5D01G163700.1	Wheat	cytosol, peroxisome, plasma membrane	60.33	60.0
TraesCS4B01G054700.1	Wheat	cytosol, peroxisome, plasma membrane	59.5	59.96
TraesCS7A01G478500.1	Wheat	cytosol, peroxisome, plasma membrane	57.43	59.7
GSMUA_Achr1P18390_001	Banana	cytosol, nucleus, plasma membrane, plastid	61.92	59.61
TraesCS5B01G155400.3	Wheat	plasma membrane	58.67	59.37
HORVU5Hr1G049490.3	Barley	nucleus, plastid	56.95	59.11
Zm00001d023392_P002	Maize	cytosol, peroxisome, plasma membrane	60.12	59.1
TraesCS7B01G381200.2	Wheat	plasma membrane	57.71	58.68
TraesCS7B01G381000.1	Wheat	cytosol, nucleus, plasma membrane	56.25	58.6
Os12t0512700-01	Rice	cytosol, peroxisome	29.99	56.73
OQU91497	Sorghum	cytosol, nucleus, plasma membrane	53.63	56.19
Solyc12g019640.1.1	Tomato	plasma membrane	23.5	55.92
TraesCS4A01G384800.1	Wheat	cytosol, nucleus, plasma membrane	53.56	55.28
Solyc09g091660.2.1	Tomato	plastid	53.14	53.4
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	51.07	52.34
Solyc12g098210.1.1	Tomato	plastid	51.42	52.21
Solyc03g120980.2.1	Tomato	plastid	53.9	52.0
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	50.79	51.22
Solyc08g067620.2.1	Tomato	nucleus	51.42	51.2
Solyc11g007300.1.1	Tomato	plastid	51.0	50.41
Solyc11g007280.1.1	Tomato	plastid	51.14	50.41
Solyc11g067000.1.1	Tomato	extracellular, plastid	50.79	50.24
Os12t0239900-01	Rice	plasma membrane	2.49	50.0
Solyc05g055330.2.1	Tomato	plastid	51.0	49.93
Solyc06g065670.2.1	Tomato	plasma membrane	48.1	49.43
Solyc05g018510.2.1	Tomato	cytosol, peroxisome, plasma membrane	48.45	49.33
Solyc02g081870.2.1	Tomato	unclear	47.48	49.04
Solyc06g076930.1.1	Tomato	nucleus	48.03	48.77
Solyc02g055530.2.1	Tomato	extracellular	1.87	46.55
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	26.75	46.24

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_trans_N
InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0007275
GO:GO:0008150	GO:GO:0009506	GO:GO:0009719	GO:GO:0009926	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0048364	GO:GO:0055085
GO:GO:0071366	InterPro:IPR003439	UniProt:K4B1D6	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005
PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF259
SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc01g101070.2	EnsemblPlants:Solyc01g101070.2.1	TMHMM:TMhelix	UniParc:UPI0002767A7B
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:90921430..90931210

Molecular Weight (calculated)

163185.0 Da

IEP (calculated)

8.036

GRAVY (calculated)

0.062

Length

1447 amino acids

Sequence
(BLAST)

0001: MAQLVSSDDI ESIRMDLSEI GRSFRSSFRR QTSILRSNSA LSASEKDDVV DEENMLAWAA IERLPTYDRL RSSVFEEVNG NEANVKTKRV TDVTKLGAVE
0101: RHVFIEKMIK HIEHDNLQLL HKIRKRIDKV GVKLPTVEVR YKNLTIEAEC ELVHGKPLPT LWNSLKSTIM NLARLPGLQS EMAKINIIND VSGVIKPGRM
0201: TLLLGPPGCG KTTLLKALSG NLDNSLKVSG EISYNGYKLE EFVPQKTSAY ISQNDLHIPE MTVRETLDYS SCFQGVGSRA DIMIDLSRRE KEAGIVPDPD
0301: IDTYMKAIAV EGQKTNLQTD YILKILGLDI CAETLVGDAM RRGISGGQKK RLTTGELIVG PTKALFMDEI SNGLDSSTTY QIVACLQQLA HITDATILVA
0401: LLQPAPETFD LFDDIILMAE GKILYHGPRN SALEFFESCG FKCPERKGVA DFLQEVTSKK DQAQYWHETK ETYKFLSVDT LSRKFKESPY RKKLNDELSV
0501: AYDKSRCHKN SITFRDYSLP KWELFRACMS REFLLMKRNS FIYIFKTVQL VIIAFITMTV FLRTRMHTDL VHANYYLGAL FFALIILLVD GFPELTMTIA
0601: RLAVFYKQND LCFYPAWAYA IPAAILKIPL SILESIIWTC LTYYVIGFSP EAGRFFRQLL LLFAVHMTSI SMFRFLASVC RTVVASTAAG SLSILFVFLF
0701: SGFIIPRPSM PVWLKWGFWI SPLTYGEIGL AVNEFLAPRW QKTLSTNTTL GNEVLDSRGL NFDGYLYWIS VCALFGFTIL FNIGFTLALT FLKAPGSRAI
0801: ISRDNYSQIE GSSDSSDKAD AKENSKTTMD SHEGAGRMVL PFEPLSLVFR DVQYSVDTPA AMKELGFTQN KLQLLSDITG AFRPGVLAAL MGVSGAGKTT
0901: LLDVLAGRKT SGHVEGEIKV GGYPKVQETF ARVSGYCEQT DIHSPQITVE ESVIFSAWLR LHPQIDSRTK YEFVKEVLET IELDGIKDTL VGMPGVSGLS
1001: TEQRKRLTIA VELVANPSII FMDEPTTGLD ARSAAIVMRA VKNVADTGRT IVCTIHQPSI DIFEAFDELI LLKSGGRMIY WGPLGRNSCK MIEYFEGISG
1101: VPKIKNNYNP ATWMLEVTST SSEAETSIDF AEVYKNSALH KNNEELVKKL TFPPAGSKDL HFPTQFSQNG WGQFKTCFWK QYWSYWRSPS YNLMRSLHML
1201: FASVVFGLLF WNKGKKLDDQ QSVFSVFGSM FTAVIFCGIN NSSSVLPYVT TERSVLYRER FAGMYASWAY ALAQVAIEIP YLLAQALSFT VITYSMIGYY
1301: WSAHKVLWYF YSMFCTLLYF TYLGMMLVSL TPNLPVAAIL QSSFYTMFNL FAGFLIPKAQ IPKWWIWFYY LVPTSWTLNG MLTSQYGDVD TEITVFGDKK
1401: SVAAFIRDYF GFHHNQLPIV GVVLIAYPLV FATLFAFFIG RLNFQRR

Best Arabidopsis Sequence Match ( AT3G53480.1 )
(BLAST)

0001: MAHMVGADDI ESLRVELAEI GRSIRSSFRR HTSSFRSSSS IYEVENDGDV NDHDAEYALQ WAEIERLPTV KRMRSTLLDD GDESMTEKGR RVVDVTKLGA
0101: VERHLMIEKL IKHIENDNLK LLKKIRRRID RVGMELPTIE VRYESLKVVA ECEVVEGKAL PTLWNTAKRV LSELVKLTGA KTHEAKINII NDVNGIIKPG
0201: RLTLLLGPPS CGKTTLLKAL SGNLENNLKC SGEISYNGHR LDEFVPQKTS AYISQYDLHI AEMTVRETVD FSARCQGVGS RTDIMMEVSK REKEKGIIPD
0301: TEVDAYMKAI SVEGLQRSLQ TDYILKILGL DICAEILIGD VMRRGISGGQ KKRLTTAEMI VGPTKALFMD EITNGLDSST AFQIVKSLQQ FAHISSATVL
0401: VSLLQPAPES YDLFDDIMLM AKGRIVYHGP RGEVLNFFED CGFRCPERKG VADFLQEVIS KKDQAQYWWH EDLPYSFVSV EMLSKKFKDL SIGKKIEDTL
0501: SKPYDRSKSH KDALSFSVYS LPNWELFIAC ISREYLLMKR NYFVYIFKTA QLVMAAFITM TVFIRTRMGI DIIHGNSYMS ALFFALIILL VDGFPELSMT
0601: AQRLAVFYKQ KQLCFYPAWA YAIPATVLKV PLSFFESLVW TCLSYYVIGY TPEASRFFKQ FILLFAVHFT SISMFRCLAA IFQTVVASIT AGSFGILFTF
0701: VFAGFVIPPP SMPAWLKWGF WANPLSYGEI GLSVNEFLAP RWNQMQPNNF TLGRTILQTR GMDYNGYMYW VSLCALLGFT VLFNIIFTLA LTFLKSPTSS
0801: RAMISQDKLS ELQGTEKSTE DSSVRKKTTD SPVKTEEEDK MVLPFKPLTV TFQDLNYFVD MPVEMRDQGY DQKKLQLLSD ITGAFRPGIL TALMGVSGAG
0901: KTTLLDVLAG RKTSGYIEGD IRISGFPKVQ ETFARVSGYC EQTDIHSPNI TVEESVIYSA WLRLAPEIDA TTKTKFVKQV LETIELDEIK DSLVGVTGVS
1001: GLSTEQRKRL TIAVELVANP SIIFMDEPTT GLDARAAAIV MRAVKNVADT GRTIVCTIHQ PSIDIFEAFD ELVLLKRGGR MIYTGPLGQH SRHIIEYFES
1101: VPEIPKIKDN HNPATWMLDV SSQSVEIELG VDFAKIYHDS ALYKRNSELV KQLSQPDSGS SDIQFKRTFA QSWWGQFKSI LWKMNLSYWR SPSYNLMRMM
1201: HTLVSSLIFG ALFWKQGQNL DTQQSMFTVF GAIYGLVLFL GINNCASALQ YFETERNVMY RERFAGMYSA TAYALGQVVT EIPYIFIQAA EFVIVTYPMI
1301: GFYPSAYKVF WSLYSMFCSL LTFNYLAMFL VSITPNFMVA AILQSLFYVG FNLFSGFLIP QTQVPGWWIW LYYLTPTSWT LNGFISSQYG DIHEEINVFG
1401: QSTTVARFLK DYFGFHHDLL AVTAVVQIAF PIALASMFAF FVGKLNFQRR

Arabidopsis Description

ABCG37ABC transporter G family member 37 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFH0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.