Factsheet for Solyc05g053590.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	85.62	97.11
Solyc09g091660.2.1	Tomato	plastid	83.14	81.53
Solyc12g098210.1.1	Tomato	plastid	80.17	79.44
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	80.59	79.3
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	60.55	74.93
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	74.79	74.31
KRH09797	Soybean	endoplasmic reticulum	73.09	72.32
KRH23522	Soybean	mitochondrion	72.8	72.09
VIT_09s0002g05560.t01	Wine grape	plasma membrane	73.51	71.39
GSMUA_Achr9P02950_001	Banana	plasma membrane	69.97	71.13
KRH47506	Soybean	endoplasmic reticulum	71.67	70.97
Solyc12g019640.1.1	Tomato	plasma membrane	30.52	70.89
Os01t0609300-01	Rice	plasma membrane	64.8	70.77
GSMUA_Achr6P34530_001	Banana	plasma membrane	65.93	70.58
Os08t0384500-01	Rice	plasma membrane	37.54	69.46
AT1G15520.1	Thale cress	plastid	69.9	69.36
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	69.41	69.36
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	69.41	69.36
CDY39660	Canola	cytosol, nucleus, plasma membrane	69.33	69.19
Solyc02g055530.2.1	Tomato	extracellular	2.83	68.97
KRH67471	Soybean	endoplasmic reticulum	70.04	68.44
KRG95762	Soybean	mitochondrion	69.19	68.32
EES03260	Sorghum	plasma membrane	61.9	68.28
Zm00001d011315_P002	Maize	plasma membrane	69.48	67.94
TraesCS3B01G248400.1	Wheat	cytosol, peroxisome, plasma membrane	69.9	67.88
Solyc08g067620.2.1	Tomato	nucleus	69.83	67.86
Os01t0609900-02	Rice	plasma membrane	66.64	67.8
TraesCS3D01G234400.1	Wheat	plasma membrane	69.69	67.68
TraesCS3A01G217900.1	Wheat	cytosol	69.62	67.61
HORVU3Hr1G053350.8	Barley	vacuole	69.69	67.54
KXG32865	Sorghum	plasma membrane	69.33	67.15
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	68.98	67.13
Os01t0342750-01	Rice	plasma membrane	33.29	67.05
TraesCS7B01G292700.1	Wheat	plasma membrane	67.71	66.85
TraesCS3A01G218000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.56	66.8
TraesCS3D01G234300.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.56	66.8
TraesCS7D01G386600.1	Wheat	plasma membrane	68.34	66.78
TraesCS3B01G248500.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.41	66.67
HORVU7Hr1G092510.2	Barley	plasma membrane	67.99	66.62
TraesCS7A01G391100.1	Wheat	plasma membrane	68.06	66.6
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	68.91	66.51
KRH47220	Soybean	plasma membrane	44.76	66.46
Os01t0609200-00	Rice	plasma membrane	68.41	65.98
TraesCS2A01G483300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	67.63	65.91
Zm00001d044443_P001	Maize	cytosol, mitochondrion, nucleus, plasma membrane	67.56	65.88
TraesCS7D01G386500.1	Wheat	plasma membrane	67.71	65.84
TraesCS3A01G272800.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	67.14	65.83
TraesCS7A01G391000.1	Wheat	plasma membrane	67.63	65.77
HORVU7Hr1G092380.8	Barley	cytosol	67.35	65.72
HORVU3Hr1G071470.1	Barley	cytosol, mitochondrion, nucleus, plasma membrane	66.93	65.62
Zm00001d011319_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	67.92	65.55
TraesCSU01G097600.2	Wheat	plasma membrane	67.35	65.5
GSMUA_Achr9P01490_001	Banana	plasma membrane	69.12	65.37
TraesCS3D01G272200.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.57	65.28
HORVU3Hr1G053380.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	68.06	65.15
KXG32860	Sorghum	plasma membrane	67.49	65.14
Os01t0609000-00	Rice	plasma membrane	67.56	64.99
TraesCS3B01G523700.1	Wheat	mitochondrion	49.22	64.95
KRH09795	Soybean	endoplasmic reticulum	69.33	64.75
EER98908	Sorghum	cytosol, nucleus, plasma membrane	66.93	64.68
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.86	63.96
TraesCS3D01G474700.1	Wheat	cytosol, nucleus, plasma membrane	65.37	63.88
TraesCS3B01G524400.1	Wheat	cytosol, peroxisome, plasma membrane	65.01	63.84
TraesCS5D01G190600.1	Wheat	cytosol, nucleus, plasma membrane	65.3	63.67
TraesCS3A01G479800.1	Wheat	cytosol, nucleus, plasma membrane	65.16	63.67
HORVU5Hr1G056280.6	Barley	cytosol, nucleus, plasma membrane	65.37	63.66
EER98758	Sorghum	cytosol, nucleus, plasma membrane	65.3	63.63
TraesCS5B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	65.23	63.6
HORVU3Hr1G105140.4	Barley	cytosol, peroxisome, plasma membrane	65.08	63.55
TraesCS2B01G149900.1	Wheat	cytosol, peroxisome, plasma membrane	55.88	63.53
TraesCS5A01G185500.1	Wheat	cytosol, nucleus, plasma membrane	61.83	62.54
Zm00001d044442_P036	Maize	plasma membrane	69.55	62.39
TraesCS2D01G130000.1	Wheat	cytosol, peroxisome, plasma membrane	63.1	62.26
Os09t0333000-00	Rice	plasma membrane	35.62	61.95
KXG20401	Sorghum	plasma membrane	62.89	61.24
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	68.48	60.02
Solyc05g018510.2.1	Tomato	cytosol, peroxisome, plasma membrane	60.34	59.96
Solyc11g007300.1.1	Tomato	plastid	61.54	59.36
Solyc11g007280.1.1	Tomato	plastid	61.61	59.26
Os09t0332300-00	Rice	plasma membrane	34.21	58.47
Solyc05g055330.2.1	Tomato	plastid	61.19	58.46
Solyc11g067000.1.1	Tomato	extracellular, plastid	59.99	57.89
Solyc03g120980.2.1	Tomato	plastid	61.12	57.53
Solyc06g065670.2.1	Tomato	plasma membrane	57.01	57.17
TraesCS6A01G107100.1	Wheat	mitochondrion, plasma membrane	50.14	56.28
TraesCS6D01G094800.1	Wheat	plasma membrane	36.9	56.26
TraesCS2A01G127800.1	Wheat	cytosol, peroxisome, plasma membrane	31.3	56.16
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	33.22	56.03
Solyc02g081870.2.1	Tomato	unclear	52.41	52.82
Os01t0516900-00	Rice	plasma membrane	26.06	52.42
Solyc06g076930.1.1	Tomato	nucleus	52.55	52.07
Solyc01g101070.2.1	Tomato	plastid	52.34	51.07

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	UniProt:K4C239	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005
PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF444
SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc05g053590.2	EnsemblPlants:Solyc05g053590.2.1	TMHMM:TMhelix	UniParc:UPI0002766517
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:63657671..63665152

Molecular Weight (calculated)

160044.0 Da

IEP (calculated)

6.951

GRAVY (calculated)

0.067

Length

1412 amino acids

Sequence
(BLAST)

0001: MEPANLNNFR GSLRASMRAD SSRSVFSRSA RDEDDEEALK WAALEKLPTF DRMRKGLLFG KEGESATEVD TNDIGHQERK NLLDRLVKVA DEDNEKFLLK
0101: LKDRIQTVGI DLPSIEVRYE HLNIVADAYV GSRALPTFIN FMTNFVETFL NTIHILPSRK RQITILKDVS GMIKPSRMTL LLGPPSSGKT TLLLALAGKL
0201: DPTLKVTGKV TYNGHELHEF VPQKTAVYIS QYDLHIGEMT VRETLEFSAR CQGVGPRYEM LAELSRREKA ANIKPDHDID IYMKASVTKG QEANIVTDYV
0301: LKILGLDVCA DTMVGDEMLR GISGGQKKRV TTGEMLVGPS KALFMDEIST GLDSSTTFSI VNSLRQLVQL LKGTAVISLL QPAPETYNLF DDIILLSDAC
0401: IVYQGPREDV LDFFESMGFK CPERKGVADF LQEVTSKKDQ QQYWAKKDKP YRFITSKEFA EAYQSFHVGK ELADELTTPY DKTKSHPAAL STQKYGIGTK
0501: ELLNVCAERE FLLMKRNSFV YIFKLFQLMV MAFIMMTVFF RTEMPRDDMD DGGMYAGALF FVVVVIMFNG MAEINLTILK LPVYFKQRDL LFYPSWAYAL
0601: PTWILKIPIT FIEVGLWTFL TYYVMGFDPN VSRLFKQFLL LVLVHQMASG LFRFIGAAGR TMGVATTFGA FALVLQFALS GFVLSRNDVK KWWIWGYWIS
0701: PLMYSVNSIL VNEFDGKKWD HIVPNGAEPL GHAVVRSRGF FPDAYWYWIG VGALIGYIII FNLCYSIGLA YLNPFGKPQA IISEDSENVR LIEESETDSQ
0801: DKKRGMVLPF EPHSITFDNV VYSVDMPQEI KDQGSTEDRL VLLKGVSGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGDIKISG YPKKQETFAR
0901: ISGYCEQNDI HSPYITVYES LVYSAWLRLP QDVDKNKRKM FVEEVMELVE LTPLRSALVG LPGVNGLSTE QRKRLTIAVE LVANPSIIFM DEPTSGLDAR
1001: AAAIVMRAVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLM KRGGQEIYVG PLGRHSCHLI KYFESLPGVS KIKEAYNPAT WMLEVTAASQ EMMLGVDFTD
1101: LYKKSDLYKR NKALISELSM PRPGTKDLHF ETQFSQPFWT QCMACLWKQH LSYWRNPSYT AVRFIFTVIL ALVFGTLFWD LGSRVSQSQD LFNAMGSMYA
1201: ATLFLGVQNS SSVQPVVAVE RTVFYRERAA GMYSALPYAF GQVIVEIPYV FVQAAFYGII VYAMIGFEWT VAKFFWYLFI MYFTLLYFTF YGMMTVAISP
1301: NQNVASIVAA FFYAVWNLFS GFIVPRPRIP IWWRWYYWLC PVAWTLYGLV ASQFGDLQTM ISNDENVEQF LGRYFGFEHD FLGVVAAVIV VWPAVFAFLF
1401: AYAIKAFNFQ KR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.