Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G234400.1 | Wheat | plasma membrane | 98.83 | 98.83 |
| TraesCS3B01G248400.1 | Wheat | cytosol, peroxisome, plasma membrane | 98.69 | 98.69 |
| HORVU3Hr1G053350.8 | Barley | vacuole | 97.94 | 97.74 |
| Os01t0609300-01 | Rice | plasma membrane | 79.3 | 89.17 |
| Zm00001d011315_P002 | Maize | plasma membrane | 85.14 | 85.73 |
| KXG32863 | Sorghum | cytosol, peroxisome, plasma membrane | 85.42 | 85.6 |
| KXG32865 | Sorghum | plasma membrane | 85.56 | 85.32 |
| EER98908 | Sorghum | cytosol, nucleus, plasma membrane | 81.5 | 81.11 |
| GSMUA_Achr1P14530_001 | Banana | mitochondrion, plasma membrane | 63.48 | 80.89 |
| Zm00001d044442_P036 | Maize | plasma membrane | 87.48 | 80.81 |
| GSMUA_Achr9P02950_001 | Banana | plasma membrane | 72.21 | 75.59 |
| GSMUA_Achr6P34530_001 | Banana | plasma membrane | 68.43 | 75.44 |
| TraesCS3A01G218000.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 74.62 | 74.88 |
| TraesCS2A01G483300.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 74.0 | 74.26 |
| PGSC0003DMT400005785 | Potato | cytosol, peroxisome, plasma membrane | 31.57 | 73.44 |
| VIT_09s0002g05370.t01 | Wine grape | mitochondrion, plasma membrane | 71.05 | 72.7 |
| TraesCS3A01G272800.2 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 71.6 | 72.29 |
| TraesCS7A01G391100.1 | Wheat | plasma membrane | 70.63 | 71.17 |
| PGSC0003DMT400034130 | Potato | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 60.32 | 70.44 |
| KRH23522 | Soybean | mitochondrion | 68.84 | 70.2 |
| VIT_09s0002g05560.t01 | Wine grape | plasma membrane | 70.08 | 70.08 |
| VIT_04s0008g04790.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 69.12 | 69.99 |
| Solyc12g019640.1.1 | Tomato | plasma membrane | 29.23 | 69.9 |
| PGSC0003DMT400076208 | Potato | plastid | 68.98 | 69.65 |
| Solyc05g053590.2.1 | Tomato | cytosol, mitochondrion, peroxisome, plasma membrane | 67.61 | 69.62 |
| Solyc09g091660.2.1 | Tomato | plastid | 68.91 | 69.58 |
| TraesCS7A01G391000.1 | Wheat | plasma membrane | 69.46 | 69.56 |
| TraesCS3A01G479800.1 | Wheat | cytosol, nucleus, plasma membrane | 69.12 | 69.55 |
| KRH09797 | Soybean | endoplasmic reticulum | 68.23 | 69.52 |
| KRH47506 | Soybean | endoplasmic reticulum | 68.02 | 69.35 |
| Solyc08g067620.2.1 | Tomato | nucleus | 69.19 | 69.24 |
| KRH61824 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 68.98 | 69.22 |
| KRH52503 | Soybean | cytosol, peroxisome, plasma membrane | 68.91 | 69.2 |
| Bra026124.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 67.06 | 69.0 |
| CDY39660 | Canola | cytosol, nucleus, plasma membrane | 67.06 | 68.9 |
| CDY36570 | Canola | cytosol, nucleus, plasma membrane, plastid | 66.92 | 68.86 |
| AT1G15520.1 | Thale cress | plastid | 67.33 | 68.8 |
| Solyc12g098210.1.1 | Tomato | plastid | 67.26 | 68.63 |
| PGSC0003DMT400061280 | Potato | cytosol, nucleus, plasma membrane, plastid | 67.54 | 68.43 |
| TraesCS5A01G185500.1 | Wheat | cytosol, nucleus, plasma membrane | 65.41 | 68.12 |
| PGSC0003DMT400076209 | Potato | plasma membrane | 67.13 | 68.11 |
| Solyc12g100180.1.1 | Tomato | mitochondrion, nucleus, plasma membrane, plastid | 67.19 | 68.08 |
| TraesCS6A01G178500.1 | Wheat | plasma membrane | 67.74 | 68.02 |
| KRH16029 | Soybean | cytosol | 67.26 | 67.59 |
| KRH67471 | Soybean | endoplasmic reticulum | 67.13 | 67.54 |
| KRH05088 | Soybean | endoplasmic reticulum | 66.58 | 66.9 |
| KRG95762 | Soybean | mitochondrion | 65.61 | 66.71 |
| PGSC0003DMT400048449 | Potato | cytosol, peroxisome, plasma membrane | 55.43 | 66.23 |
| KRH09795 | Soybean | endoplasmic reticulum | 67.33 | 64.75 |
| KRH47220 | Soybean | plasma membrane | 41.82 | 63.93 |
| PGSC0003DMT400043433 | Potato | endoplasmic reticulum, plasma membrane | 6.6 | 63.16 |
| TraesCS2A01G127800.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.18 | 63.15 |
| PGSC0003DMT400005783 | Potato | cytosol, peroxisome, plasma membrane | 68.57 | 63.1 |
| TraesCS6A01G107100.1 | Wheat | mitochondrion, plasma membrane | 53.37 | 61.69 |
| TraesCS5A01G447200.1 | Wheat | plasma membrane | 50.28 | 58.76 |
| TraesCS3A01G122500.2 | Wheat | plasma membrane | 57.5 | 58.42 |
| KRG95752 | Soybean | cytosol, peroxisome, plasma membrane | 64.72 | 58.41 |
| Solyc12g019620.1.1 | Tomato | cytosol, nucleus, plasma membrane | 33.42 | 58.06 |
| TraesCS7A01G356200.1 | Wheat | plasma membrane | 46.91 | 57.17 |
| TraesCS5A01G016200.1 | Wheat | mitochondrion | 55.91 | 56.66 |
| TraesCS7A01G183900.1 | Wheat | plasma membrane | 53.71 | 56.59 |
| TraesCS4A01G331100.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 55.91 | 56.3 |
| TraesCS7A01G074500.3 | Wheat | plasma membrane | 47.11 | 54.54 |
| TraesCS5A01G158300.1 | Wheat | plasma membrane | 51.1 | 51.0 |
| TraesCS5A01G158100.1 | Wheat | plasma membrane | 50.96 | 50.93 |
| TraesCS5A01G555900.1 | Wheat | cytosol | 26.27 | 50.33 |
| TraesCS7A01G268800.2 | Wheat | cytosol, nucleus, plasma membrane | 46.56 | 50.15 |
| TraesCS7A01G106600.1 | Wheat | plasma membrane | 26.55 | 49.81 |
| TraesCS7A01G478500.1 | Wheat | cytosol, peroxisome, plasma membrane | 47.59 | 49.71 |
| TraesCS5A01G502800.1 | Wheat | cytosol, nucleus, plasma membrane | 45.53 | 49.15 |
| VIT_04s0008g04840.t01 | Wine grape | plasma membrane | 37.55 | 48.79 |
| TraesCS4A01G384800.1 | Wheat | cytosol, nucleus, plasma membrane | 45.19 | 46.86 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans |
| InterPro:ABC_trans_N | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 |
| PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF273 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS3A01G217900 | EnsemblPlants:TraesCS3A01G217900.1 | TIGR:cd03232 | TIGR:cd03233 | SEG:seg | : |
Description
No Description!
Coordinates
chr3A:-:399573432..399580158
Molecular Weight (calculated)
163466.0 Da
IEP (calculated)
7.290
GRAVY (calculated)
0.052
Length
1454 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDATAEIHNV ASMRRDSGSI WRRGDDVFSR SSRDEDDEEA LRWAALEKLP TYDRVRRAIL PPLDGGEGAA PGAAAGKGVV DVHGLGPRER RALLERLVRV
0101: ADEDNERFLL KLKDRLERVG IEMPTIEVRF ERLVAEAEVR VGNSGLPTVL NSITNTLEEA ANALRILPNR KRTMPILHDV SGIIKPRRMT LLLGPPGSGK
0201: TTLLLALAGR LDKDLKVSGN VTYNGHGMEE FVPERTAAYI SQHDLHIGEM TVRETLAFSA RCQGVGTRFD MLTELSRREK AANIKPDADI DAFMKASSMG
0301: GLEANVNTDY ILKILGLEMC ADTMVGDEML RGISGGQRKR VTTGEMLVGP AKALFMDEIS TGLDSSTTFQ IVNSLRQSVH ILGGTAVISL LQPAPETYNL
0401: FDDIILLSDG QVVYQGPRED VLEFFESVGF KCPERKGIAD FLQEVTSKKD QKQYWAQGDE PYRFVPVKDF VRAFQSFHTG RAIRKELAVP FDKSKSHPAA
0501: LTTTRYGVSG TELLKANIDR EILLMKRNSF VYMFRTFQLI LMSFIAMTLF FRTKMKRDSV TNGGIYMGAL FFGVLMIMFN GFSELALTVF KLPVFFKQRD
0601: LLFYPAWAYT IPSWILKIPI TFVEVGGYVF ITYYVMGFDP NVGRFFKQYL LMLAINQMAA SLFRFIGGAA RNMIVANVFA SFMLLIFMVL GGFILVREKV
0701: KKWWIWGYWI SPLMYAQNAI SVNEFFGHSW DKILNSTASN ETLGVQVLKY RGVFPEAKWY WIGLGAMLGY TLLFNALFTL ALTYLKAYGN SRSSVSEDEL
0801: KEKHANLNGE VLDIDRLESP SNDGPIRMNT GNDSAIVEEN SSPMQRGMVL PFLPLSLTFD NIRYSVDMPP EMKAQGVVED RLELLKGVSG SFRPGVLTAL
0901: MGVSGAGKTT LMDVLAGRKT GGYIQGNISI SGYPKKQETF ARVSGYCEQN DIHSPQVTVY ESLLFSAWLR LPEDVDSNKR RMFIEEVMEL VELKPLKDAL
1001: VGLPGVNGLS TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRT VRNTVDTGRT VVCTIHQPSI DIFEAFDELF LMKRGGEEIY AGPLGHHSAD
1101: LINYYEGIHG VSKIKDGYNP ATWMLEVTTI GQEQMLAIDF SDIYKKSELY QRNKALIKEL SQPAPGSTDL YFPTQYSQSS ITQCIACLWK QNLSYWRNPP
1201: YNAVRFLFTT VIALLFGTIF WDLGGKMSQS QDLFNAMGSM YAAVLFIGIM NCTSVQPVVA VERTVFYRER AAGMYSAFPY AFGQVVIELP YTLAQATVHG
1301: VIVYSMIGFE WTAPKFFWYL FFMYFTLLYF TFYGMMAVGL TPNYHIASIV SSAFYAIWNL FSGFIIPRPK VPIWWRWYCW VCPVAWTLYG LVVSQFGDVT
1401: TPMEDGTPVK DFIEGYFDFK HSWLGYVATV VVAFAVLFAF LFSFAIMKLN FQKR
0101: ADEDNERFLL KLKDRLERVG IEMPTIEVRF ERLVAEAEVR VGNSGLPTVL NSITNTLEEA ANALRILPNR KRTMPILHDV SGIIKPRRMT LLLGPPGSGK
0201: TTLLLALAGR LDKDLKVSGN VTYNGHGMEE FVPERTAAYI SQHDLHIGEM TVRETLAFSA RCQGVGTRFD MLTELSRREK AANIKPDADI DAFMKASSMG
0301: GLEANVNTDY ILKILGLEMC ADTMVGDEML RGISGGQRKR VTTGEMLVGP AKALFMDEIS TGLDSSTTFQ IVNSLRQSVH ILGGTAVISL LQPAPETYNL
0401: FDDIILLSDG QVVYQGPRED VLEFFESVGF KCPERKGIAD FLQEVTSKKD QKQYWAQGDE PYRFVPVKDF VRAFQSFHTG RAIRKELAVP FDKSKSHPAA
0501: LTTTRYGVSG TELLKANIDR EILLMKRNSF VYMFRTFQLI LMSFIAMTLF FRTKMKRDSV TNGGIYMGAL FFGVLMIMFN GFSELALTVF KLPVFFKQRD
0601: LLFYPAWAYT IPSWILKIPI TFVEVGGYVF ITYYVMGFDP NVGRFFKQYL LMLAINQMAA SLFRFIGGAA RNMIVANVFA SFMLLIFMVL GGFILVREKV
0701: KKWWIWGYWI SPLMYAQNAI SVNEFFGHSW DKILNSTASN ETLGVQVLKY RGVFPEAKWY WIGLGAMLGY TLLFNALFTL ALTYLKAYGN SRSSVSEDEL
0801: KEKHANLNGE VLDIDRLESP SNDGPIRMNT GNDSAIVEEN SSPMQRGMVL PFLPLSLTFD NIRYSVDMPP EMKAQGVVED RLELLKGVSG SFRPGVLTAL
0901: MGVSGAGKTT LMDVLAGRKT GGYIQGNISI SGYPKKQETF ARVSGYCEQN DIHSPQVTVY ESLLFSAWLR LPEDVDSNKR RMFIEEVMEL VELKPLKDAL
1001: VGLPGVNGLS TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRT VRNTVDTGRT VVCTIHQPSI DIFEAFDELF LMKRGGEEIY AGPLGHHSAD
1101: LINYYEGIHG VSKIKDGYNP ATWMLEVTTI GQEQMLAIDF SDIYKKSELY QRNKALIKEL SQPAPGSTDL YFPTQYSQSS ITQCIACLWK QNLSYWRNPP
1201: YNAVRFLFTT VIALLFGTIF WDLGGKMSQS QDLFNAMGSM YAAVLFIGIM NCTSVQPVVA VERTVFYRER AAGMYSAFPY AFGQVVIELP YTLAQATVHG
1301: VIVYSMIGFE WTAPKFFWYL FFMYFTLLYF TFYGMMAVGL TPNYHIASIV SSAFYAIWNL FSGFIIPRPK VPIWWRWYCW VCPVAWTLYG LVVSQFGDVT
1401: TPMEDGTPVK DFIEGYFDFK HSWLGYVATV VVAFAVLFAF LFSFAIMKLN FQKR
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.