Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G331400.3 | Wheat | plasma membrane | 68.0 | 91.69 |
| HORVU4Hr1G081040.4 | Barley | cytosol, nucleus, plasma membrane | 89.75 | 89.69 |
| TraesCS7A01G268800.2 | Wheat | cytosol, nucleus, plasma membrane | 86.56 | 86.37 |
| Os08t0544400-01 | Rice | plasma membrane | 29.18 | 82.74 |
| OQU80771 | Sorghum | plasma membrane | 68.89 | 79.05 |
| Zm00001d052726_P008 | Maize | cytosol, nucleus, plasma membrane | 77.95 | 76.7 |
| Zm00001d031724_P003 | Maize | plasma membrane | 78.54 | 75.79 |
| TraesCS5A01G555900.1 | Wheat | cytosol | 42.09 | 74.7 |
| TraesCS7A01G106600.1 | Wheat | plasma membrane | 39.05 | 67.87 |
| GSMUA_Achr1P08050_001 | Banana | cytosol, peroxisome, plasma membrane | 57.91 | 60.0 |
| GSMUA_Achr1P08030_001 | Banana | plasma membrane | 54.79 | 56.81 |
| TraesCS5A01G447200.1 | Wheat | plasma membrane | 47.51 | 51.45 |
| TraesCS7A01G183900.1 | Wheat | plasma membrane | 49.07 | 47.9 |
| TraesCS5A01G016200.1 | Wheat | mitochondrion | 50.93 | 47.8 |
| TraesCS4A01G331100.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 50.85 | 47.44 |
| TraesCS7A01G356200.1 | Wheat | plasma membrane | 41.13 | 46.44 |
| TraesCS7A01G391100.1 | Wheat | plasma membrane | 49.59 | 46.29 |
| TraesCS3A01G218000.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 49.67 | 46.17 |
| TraesCS2A01G483300.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 49.67 | 46.17 |
| TraesCS3A01G272800.2 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 49.29 | 46.11 |
| TraesCS3A01G479800.1 | Wheat | cytosol, nucleus, plasma membrane | 49.44 | 46.09 |
| TraesCS7A01G074500.3 | Wheat | plasma membrane | 42.84 | 45.94 |
| TraesCS6A01G178500.1 | Wheat | plasma membrane | 49.22 | 45.79 |
| TraesCS3A01G122500.2 | Wheat | plasma membrane | 48.63 | 45.77 |
| TraesCS5A01G185500.1 | Wheat | cytosol, nucleus, plasma membrane | 47.36 | 45.7 |
| TraesCS7A01G391000.1 | Wheat | plasma membrane | 49.22 | 45.66 |
| TraesCS3A01G217900.1 | Wheat | cytosol | 49.15 | 45.53 |
| TraesCS6A01G107100.1 | Wheat | mitochondrion, plasma membrane | 41.35 | 44.28 |
| TraesCS7A01G478500.1 | Wheat | cytosol, peroxisome, plasma membrane | 44.84 | 43.39 |
| TraesCS5A01G158300.1 | Wheat | plasma membrane | 46.62 | 43.1 |
| TraesCS5A01G158100.1 | Wheat | plasma membrane | 46.18 | 42.75 |
| TraesCS4A01G384800.1 | Wheat | cytosol, nucleus, plasma membrane | 42.32 | 40.66 |
| TraesCS2A01G127800.1 | Wheat | cytosol, peroxisome, plasma membrane | 22.49 | 38.5 |
| Os01t0724500-01 | Rice | plasma membrane | 5.64 | 37.07 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans | InterPro:ABC_trans_N |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 |
| ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF214 | SMART:SM00382 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5A01G502800 | EnsemblPlants:TraesCS5A01G502800.1 | TIGR:cd03232 | SEG:seg | : |
Description
No Description!
Coordinates
chr5A:-:667709711..667725690
Molecular Weight (calculated)
153297.0 Da
IEP (calculated)
7.600
GRAVY (calculated)
0.110
Length
1347 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMEYSREAEQ APEMRKPPPP LTHEDNRRFL EMLREKKERL GVGVEKVEVR FEELTVEADV PVGRRTLPTL FNCAVNAAQE LATYSHMCTA RKKPIKIING
0101: ASGTISPSRM TLLLGAPGSG KTTFLKALAG KLDSSLKLKG KVMYNGQEVN FSTPQYMHAY ISQYDLHNSE MTVRETIDFS SKMLGTNNEF GMLGEGLIKK
0201: HGHINKVDQD LDLFMKTITF GEGSNLITNY IIKILGLSDC ADTLVGDELR RGISGGQKKR ATIGEMLVGL ARCFFMDDIS TGLDSSTTYE ILKFVQQMTH
0301: MMDLTVVISL LQPPPETLEL FDDIILLCEG QIVYHGPREN AINFFGTMGF KCPDRKNVAD FLQEVTSKMD QKQYWTDEEN KYQYWPIEKF ADSFHSSYLP
0401: RLVEDNLYMP NNMGKHNEIK TNATRSISRW NIFKACFSRE VLLLKRNSPL HIFKTVQIVI LAFVISTVFL RTNMNHKNVL DANKYMGSLF IAIVIVNING
0501: MTEIAMTIKR LPTFYKQREL LALPGWALVF SIFLINIPMS LVETCLWTSL TYYVIGYAPS FVRFIQQFLV LFATHQMSMG LYRFLAAIGR TQVMANMLST
0601: TALIAMYIFG GFVISKDNLQ PWLQWGCWTS PFTYAQNAVA LNEFLDERWD TEFYYANANT IGEAILKIRG LLTNWHRYWI CVIILFGFSM VFNILTIFAL
0701: EFMQSPHKHQ VNASAMKSKK DCKNHIIGTG NASTSQVVLP FQPLSIIFDH VNYFVDMPKE MIKYGVPEEK LQLLQDVSGV FRPGVLTALM GITGAGKTTL
0801: LDVLAGRKTG GYIEGTIMIE GYPKKQETFS RISGYCEQND IHSPNLTVHE SLQFSAWLRL PSNVKSRERD IFIDEVMDLV ELTGLKNAMV GMAGATGLSA
0901: EQRKRLTIAV ELVASPSIIF MDEPTTGLDA RAAAVVMRTI RKTVDTGRTV VCTIHQPSIG IFESFDELLL MKRGGQIIYS GSLGPLSSNM IKYFEAIPSV
1001: PRIKEGQNPA SWVLDISSHT TEYEIGVDYA EIYRSSYLYR DNMLLMAELG HPAPNTEDLY FPPGYWHNFT AQYMACLWKQ RCAYWKNIEH NGVRFLNTFI
1101: VSILFGVVFW KIGSTITQQQ DVFNILGVVF GSALFLGFNN CISLQPIVIM ERVVLYREKA AGMYSTLAYA IAQMAIELPY IIVQVLVFAM IVYPMIGFQM
1201: TTVKLFWFLL YMMLSFMYYT LYGMMTVALT PNLEMASGLS FLIYVFWNVF SGFIIGRELI PIWWRWVYWA NPAAWTVYGL MFSQLGDRTE LIHVPGQPDQ
1301: TVQEFLEGYL GLEGRYFNLV TYLHLVVIAL FALLFFIFVK HLKFERR
0101: ASGTISPSRM TLLLGAPGSG KTTFLKALAG KLDSSLKLKG KVMYNGQEVN FSTPQYMHAY ISQYDLHNSE MTVRETIDFS SKMLGTNNEF GMLGEGLIKK
0201: HGHINKVDQD LDLFMKTITF GEGSNLITNY IIKILGLSDC ADTLVGDELR RGISGGQKKR ATIGEMLVGL ARCFFMDDIS TGLDSSTTYE ILKFVQQMTH
0301: MMDLTVVISL LQPPPETLEL FDDIILLCEG QIVYHGPREN AINFFGTMGF KCPDRKNVAD FLQEVTSKMD QKQYWTDEEN KYQYWPIEKF ADSFHSSYLP
0401: RLVEDNLYMP NNMGKHNEIK TNATRSISRW NIFKACFSRE VLLLKRNSPL HIFKTVQIVI LAFVISTVFL RTNMNHKNVL DANKYMGSLF IAIVIVNING
0501: MTEIAMTIKR LPTFYKQREL LALPGWALVF SIFLINIPMS LVETCLWTSL TYYVIGYAPS FVRFIQQFLV LFATHQMSMG LYRFLAAIGR TQVMANMLST
0601: TALIAMYIFG GFVISKDNLQ PWLQWGCWTS PFTYAQNAVA LNEFLDERWD TEFYYANANT IGEAILKIRG LLTNWHRYWI CVIILFGFSM VFNILTIFAL
0701: EFMQSPHKHQ VNASAMKSKK DCKNHIIGTG NASTSQVVLP FQPLSIIFDH VNYFVDMPKE MIKYGVPEEK LQLLQDVSGV FRPGVLTALM GITGAGKTTL
0801: LDVLAGRKTG GYIEGTIMIE GYPKKQETFS RISGYCEQND IHSPNLTVHE SLQFSAWLRL PSNVKSRERD IFIDEVMDLV ELTGLKNAMV GMAGATGLSA
0901: EQRKRLTIAV ELVASPSIIF MDEPTTGLDA RAAAVVMRTI RKTVDTGRTV VCTIHQPSIG IFESFDELLL MKRGGQIIYS GSLGPLSSNM IKYFEAIPSV
1001: PRIKEGQNPA SWVLDISSHT TEYEIGVDYA EIYRSSYLYR DNMLLMAELG HPAPNTEDLY FPPGYWHNFT AQYMACLWKQ RCAYWKNIEH NGVRFLNTFI
1101: VSILFGVVFW KIGSTITQQQ DVFNILGVVF GSALFLGFNN CISLQPIVIM ERVVLYREKA AGMYSTLAYA IAQMAIELPY IIVQVLVFAM IVYPMIGFQM
1201: TTVKLFWFLL YMMLSFMYYT LYGMMTVALT PNLEMASGLS FLIYVFWNVF SGFIIGRELI PIWWRWVYWA NPAAWTVYGL MFSQLGDRTE LIHVPGQPDQ
1301: TVQEFLEGYL GLEGRYFNLV TYLHLVVIAL FALLFFIFVK HLKFERR
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.