Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G190600.1 | Wheat | cytosol, nucleus, plasma membrane | 97.99 | 94.48 |
| TraesCS5B01G183500.1 | Wheat | cytosol, nucleus, plasma membrane | 96.99 | 93.51 |
| HORVU5Hr1G056280.6 | Barley | cytosol, nucleus, plasma membrane | 96.7 | 93.1 |
| TraesCS2A01G127800.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.21 | 85.51 |
| EER98758 | Sorghum | cytosol, nucleus, plasma membrane | 85.67 | 82.54 |
| TraesCS3A01G479800.1 | Wheat | cytosol, nucleus, plasma membrane | 83.81 | 80.97 |
| Os09t0333000-00 | Rice | plasma membrane | 41.98 | 72.17 |
| GSMUA_Achr1P14530_001 | Banana | mitochondrion, plasma membrane | 58.17 | 71.17 |
| Os09t0332300-00 | Rice | plasma membrane | 39.97 | 67.55 |
| GSMUA_Achr9P02950_001 | Banana | plasma membrane | 66.05 | 66.38 |
| GSMUA_Achr6P34530_001 | Banana | plasma membrane | 62.03 | 65.66 |
| TraesCS3A01G217900.1 | Wheat | cytosol | 68.12 | 65.41 |
| PGSC0003DMT400034130 | Potato | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 57.81 | 64.82 |
| TraesCS3A01G272800.2 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 66.69 | 64.65 |
| PGSC0003DMT400005785 | Potato | cytosol, peroxisome, plasma membrane | 28.94 | 64.64 |
| TraesCS3A01G218000.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 66.91 | 64.46 |
| TraesCS2A01G483300.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 66.91 | 64.46 |
| VIT_09s0002g05370.t01 | Wine grape | mitochondrion, plasma membrane | 65.33 | 64.18 |
| KRH47506 | Soybean | endoplasmic reticulum | 65.04 | 63.67 |
| KRH23522 | Soybean | mitochondrion | 64.68 | 63.32 |
| KRH09797 | Soybean | endoplasmic reticulum | 64.61 | 63.21 |
| VIT_04s0008g04790.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 64.76 | 62.95 |
| Solyc09g091660.2.1 | Tomato | plastid | 64.61 | 62.64 |
| TraesCS7A01G391100.1 | Wheat | plasma membrane | 64.68 | 62.58 |
| PGSC0003DMT400076208 | Potato | plastid | 64.54 | 62.57 |
| Solyc12g019640.1.1 | Tomato | plasma membrane | 27.15 | 62.34 |
| KRH52503 | Soybean | cytosol, peroxisome, plasma membrane | 64.61 | 62.29 |
| VIT_09s0002g05560.t01 | Wine grape | plasma membrane | 64.83 | 62.24 |
| KRH61824 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 64.54 | 62.18 |
| Solyc12g098210.1.1 | Tomato | plastid | 63.18 | 61.89 |
| Solyc08g067620.2.1 | Tomato | nucleus | 64.4 | 61.87 |
| Solyc05g053590.2.1 | Tomato | cytosol, mitochondrion, peroxisome, plasma membrane | 62.54 | 61.83 |
| TraesCS7A01G391000.1 | Wheat | plasma membrane | 64.18 | 61.71 |
| PGSC0003DMT400061280 | Potato | cytosol, nucleus, plasma membrane, plastid | 62.75 | 61.05 |
| PGSC0003DMT400076209 | Potato | plasma membrane | 62.61 | 60.99 |
| CDY39660 | Canola | cytosol, nucleus, plasma membrane | 61.75 | 60.92 |
| Bra026124.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 61.6 | 60.86 |
| CDY36570 | Canola | cytosol, nucleus, plasma membrane, plastid | 61.6 | 60.86 |
| AT1G15520.1 | Thale cress | plastid | 62.03 | 60.86 |
| KRH67471 | Soybean | endoplasmic reticulum | 62.89 | 60.76 |
| PGSC0003DMT400048449 | Potato | cytosol, peroxisome, plasma membrane | 52.87 | 60.64 |
| KRG95762 | Soybean | mitochondrion | 62.03 | 60.56 |
| Solyc12g100180.1.1 | Tomato | mitochondrion, nucleus, plasma membrane, plastid | 62.25 | 60.56 |
| TraesCS6A01G178500.1 | Wheat | plasma membrane | 62.75 | 60.5 |
| KRH16029 | Soybean | cytosol | 62.61 | 60.4 |
| KRH05088 | Soybean | endoplasmic reticulum | 62.25 | 60.06 |
| KRH09795 | Soybean | endoplasmic reticulum | 62.39 | 57.61 |
| KRH47220 | Soybean | plasma membrane | 38.9 | 57.1 |
| PGSC0003DMT400005783 | Potato | cytosol, peroxisome, plasma membrane | 63.83 | 56.39 |
| TraesCS5A01G447200.1 | Wheat | plasma membrane | 49.21 | 55.23 |
| TraesCS6A01G107100.1 | Wheat | mitochondrion, plasma membrane | 48.71 | 54.05 |
| TraesCS5A01G016200.1 | Wheat | mitochondrion | 55.52 | 54.01 |
| TraesCS7A01G183900.1 | Wheat | plasma membrane | 52.94 | 53.55 |
| Solyc12g019620.1.1 | Tomato | cytosol, nucleus, plasma membrane | 32.09 | 53.52 |
| TraesCS4A01G331100.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 54.94 | 53.12 |
| KRG95752 | Soybean | cytosol, peroxisome, plasma membrane | 61.1 | 52.95 |
| TraesCS3A01G122500.2 | Wheat | plasma membrane | 54.23 | 52.9 |
| TraesCS7A01G356200.1 | Wheat | plasma membrane | 44.27 | 51.8 |
| TraesCS5A01G555900.1 | Wheat | cytosol | 27.29 | 50.2 |
| TraesCS7A01G074500.3 | Wheat | plasma membrane | 44.99 | 50.0 |
| TraesCS7A01G268800.2 | Wheat | cytosol, nucleus, plasma membrane | 46.7 | 48.3 |
| TraesCS5A01G502800.1 | Wheat | cytosol, nucleus, plasma membrane | 45.7 | 47.36 |
| TraesCS5A01G158300.1 | Wheat | plasma membrane | 49.28 | 47.22 |
| TraesCS5A01G158100.1 | Wheat | plasma membrane | 49.0 | 47.01 |
| TraesCS7A01G478500.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.28 | 46.41 |
| TraesCS7A01G106600.1 | Wheat | plasma membrane | 24.79 | 44.65 |
| VIT_04s0008g04840.t01 | Wine grape | plasma membrane | 35.1 | 43.79 |
| TraesCS4A01G384800.1 | Wheat | cytosol, nucleus, plasma membrane | 43.05 | 42.87 |
| PGSC0003DMT400043433 | Potato | endoplasmic reticulum, plasma membrane | 3.58 | 32.89 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans |
| InterPro:ABC_trans_N | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 |
| PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF306 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS5A01G185500 | EnsemblPlants:TraesCS5A01G185500.1 | TIGR:cd03232 | TIGR:cd03233 | SEG:seg | : |
Description
No Description!
Coordinates
chr5A:-:385546684..385554881
Molecular Weight (calculated)
156695.0 Da
IEP (calculated)
7.396
GRAVY (calculated)
-0.025
Length
1396 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDDAGEIHAF GRSLRRESSV WSRGGEELFS RSSRDEDDEE ALRWAALEKL PTYDRARTAV LAMPEGELKE VNVDKLGAQE KHALLQRIAW VGDDHERFLS
0101: KFKDRVDRVG IQLPTIEVRY DNLNVEAEAY VGSRGLPTIL NTYANVLEGL ANALHLTQNK KRKISILHNV SGIIKPHRMT LLLGPPGAGK TSLLLALAGT
0201: LPSSLKMSGD IIYNGHTMDE FVPRRSAAYV SQHDLHMAEL TVRETVNFSA KCQGIGHRFD LLMELSRREK EENIKPDPEI DIYLKAAATG EQKAEVVTNH
0301: ILKVLGLDIC ADTLVGNNML RGISGGQKKR VTTAEMLVTP GRALFMDEIS TGLDSSTTFQ IVNSIRQTIH IIGGTAVIAL LQPAPETYEL FDDIILLSDG
0401: QVVYNGPREH VLEFFKSMGF KCPERKGVAD FLQEVTSRKD QGQYWINSDE TYRYVPVKEF AEAFQSFHVG QAIKSELAVP FDKNGSHPAA LKTSQYGASM
0501: KELLKANINR EVLLMKRNSF VYIFKATQLT IMAIIAMTVF LRINMHHDSV TDGGIYMGAL FFGILMIMFN GLAEVGLTIA KLPVFFKQRN LLFFPAWTYT
0601: LPSWLIKTPL SLLNVTIWVG ITYYGIGFDP NVQRFFRQFL LLFLMNEASS GLFRFIAGLA RHQVVSSTLG SFCILIFMLT GGFVLARENV KKWWIWGYWI
0701: SPLMYAQNAL SVNEFLGHSW NKTIPGFKEP LGNLVLKSRG VFPDTKWYWI GAGALLGYVL LFNILYTVCL TFLDPFDSNQ PTVSEETLKI KQANLTGEVL
0801: EASSRGRVNN STIASRDTED GSNDESTSNH ATVNSSPGKK GMVLPFVPLS ITFDDIKYSV DMPQEIKAQG VAESRLELLK GISGSFRPGV LTALMGVSGA
0901: GKTTLMDVLA GRKTSGYIEG NITISGYPKK QETFARVSGY CEQNDIHSPN VTVYESLAFS SWLRLPANVD SSTRKMFIDE VMELVELSPL RDALVGLPGV
1001: SGLSTEQRKR LTIAVELVAN PSIIFMDEPT SGLDARAAAI VMRAIRNTVD TGRTVVCTIH QPSIDIFESF DELFLMKRGG EEIYVGPLGR HSCELIRYFE
1101: AVEDVRKIKD GYNPSTWMLE VTSATQEQMT GINFSQVYKN SDLYRRNKNL IKELSTPPEG SSDLSFPTQY SQTFLTQCFA CLWKQSLSYW RNPPYTAVKY
1201: FYTTVIALLF GTMFWGIGKK RHNQQDLFNA MGSMYSSVLF MGVQNSASVQ PVVAVERTVF YRERAAHMYS PLPYALGQVA IELPYIFVQS LIYGVLVYAM
1301: IGFEWTAVKF FWYLFFMYFT LAYFTFYGMM SVGLTPNYNV ASVASTAFYA LWNLFSGFIT PRTNPDMVEV VLLAQPYCMD TEWSGHFTVW RRNRKV
0101: KFKDRVDRVG IQLPTIEVRY DNLNVEAEAY VGSRGLPTIL NTYANVLEGL ANALHLTQNK KRKISILHNV SGIIKPHRMT LLLGPPGAGK TSLLLALAGT
0201: LPSSLKMSGD IIYNGHTMDE FVPRRSAAYV SQHDLHMAEL TVRETVNFSA KCQGIGHRFD LLMELSRREK EENIKPDPEI DIYLKAAATG EQKAEVVTNH
0301: ILKVLGLDIC ADTLVGNNML RGISGGQKKR VTTAEMLVTP GRALFMDEIS TGLDSSTTFQ IVNSIRQTIH IIGGTAVIAL LQPAPETYEL FDDIILLSDG
0401: QVVYNGPREH VLEFFKSMGF KCPERKGVAD FLQEVTSRKD QGQYWINSDE TYRYVPVKEF AEAFQSFHVG QAIKSELAVP FDKNGSHPAA LKTSQYGASM
0501: KELLKANINR EVLLMKRNSF VYIFKATQLT IMAIIAMTVF LRINMHHDSV TDGGIYMGAL FFGILMIMFN GLAEVGLTIA KLPVFFKQRN LLFFPAWTYT
0601: LPSWLIKTPL SLLNVTIWVG ITYYGIGFDP NVQRFFRQFL LLFLMNEASS GLFRFIAGLA RHQVVSSTLG SFCILIFMLT GGFVLARENV KKWWIWGYWI
0701: SPLMYAQNAL SVNEFLGHSW NKTIPGFKEP LGNLVLKSRG VFPDTKWYWI GAGALLGYVL LFNILYTVCL TFLDPFDSNQ PTVSEETLKI KQANLTGEVL
0801: EASSRGRVNN STIASRDTED GSNDESTSNH ATVNSSPGKK GMVLPFVPLS ITFDDIKYSV DMPQEIKAQG VAESRLELLK GISGSFRPGV LTALMGVSGA
0901: GKTTLMDVLA GRKTSGYIEG NITISGYPKK QETFARVSGY CEQNDIHSPN VTVYESLAFS SWLRLPANVD SSTRKMFIDE VMELVELSPL RDALVGLPGV
1001: SGLSTEQRKR LTIAVELVAN PSIIFMDEPT SGLDARAAAI VMRAIRNTVD TGRTVVCTIH QPSIDIFESF DELFLMKRGG EEIYVGPLGR HSCELIRYFE
1101: AVEDVRKIKD GYNPSTWMLE VTSATQEQMT GINFSQVYKN SDLYRRNKNL IKELSTPPEG SSDLSFPTQY SQTFLTQCFA CLWKQSLSYW RNPPYTAVKY
1201: FYTTVIALLF GTMFWGIGKK RHNQQDLFNA MGSMYSSVLF MGVQNSASVQ PVVAVERTVF YRERAAHMYS PLPYALGQVA IELPYIFVQS LIYGVLVYAM
1301: IGFEWTAVKF FWYLFFMYFT LAYFTFYGMM SVGLTPNYNV ASVASTAFYA LWNLFSGFIT PRTNPDMVEV VLLAQPYCMD TEWSGHFTVW RRNRKV
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.