Factsheet for PGSC0003DMT400076208

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g091660.2.1	Tomato	plastid	98.4	98.4
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	71.81	83.05
PGSC0003DMT400076209	Potato	plasma membrane	82.5	82.9
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	81.74	82.02
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	8.33	78.95
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	32.92	75.84
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	74.65	75.65
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	59.93	75.64
KRH23522	Soybean	mitochondrion	74.24	74.96
KRH09797	Soybean	endoplasmic reticulum	73.89	74.56
VIT_09s0002g05560.t01	Wine grape	plasma membrane	74.17	73.45
KRH47506	Soybean	endoplasmic reticulum	72.15	72.86
GSMUA_Achr6P34530_001	Banana	plasma membrane	66.04	72.1
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	70.62	71.97
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	70.62	71.97
GSMUA_Achr9P02950_001	Banana	plasma membrane	69.31	71.85
Os01t0609300-01	Rice	plasma membrane	64.38	71.69
CDY39660	Canola	cytosol, nucleus, plasma membrane	70.42	71.66
AT1G15520.1	Thale cress	plastid	70.62	71.47
KRH67471	Soybean	endoplasmic reticulum	70.14	69.9
Zm00001d011315_P002	Maize	plasma membrane	69.86	69.67
TraesCS3B01G248400.1	Wheat	cytosol, peroxisome, plasma membrane	70.07	69.39
Os01t0609900-02	Rice	plasma membrane	66.88	69.38
TraesCS3D01G234400.1	Wheat	plasma membrane	70.0	69.33
KRG95762	Soybean	mitochondrion	68.82	69.3
HORVU3Hr1G053350.8	Barley	vacuole	69.86	69.05
TraesCS3A01G217900.1	Wheat	cytosol	69.65	68.98
Os08t0384500-01	Rice	plasma membrane	36.53	68.94
EES03260	Sorghum	plasma membrane	61.25	68.91
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	69.24	68.71
KXG32865	Sorghum	plasma membrane	69.51	68.66
TraesCS7B01G292700.1	Wheat	plasma membrane	67.99	68.46
HORVU7Hr1G092510.2	Barley	plasma membrane	68.19	68.15
TraesCS7D01G386600.1	Wheat	plasma membrane	68.26	68.03
TraesCS7A01G391100.1	Wheat	plasma membrane	68.06	67.91
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	68.96	67.87
TraesCS3D01G234300.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.26	67.84
TraesCS3A01G218000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.26	67.84
TraesCS3B01G248500.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.19	67.77
Os01t0342750-01	Rice	plasma membrane	32.92	67.62
HORVU7Hr1G092380.8	Barley	cytosol	67.78	67.45
TraesCS7A01G391000.1	Wheat	plasma membrane	67.92	67.36
TraesCS7D01G386500.1	Wheat	plasma membrane	67.92	67.36
TraesCS2A01G483300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	67.71	67.29
Os01t0609200-00	Rice	plasma membrane	68.26	67.14
KRH09795	Soybean	endoplasmic reticulum	70.49	67.13
TraesCSU01G097600.2	Wheat	plasma membrane	67.64	67.08
Zm00001d044443_P001	Maize	cytosol, mitochondrion, nucleus, plasma membrane	67.43	67.06
GSMUA_Achr9P01490_001	Banana	plasma membrane	69.44	66.98
TraesCS3A01G272800.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.74	66.74
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	56.39	66.72
Zm00001d011319_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	67.78	66.71
HORVU3Hr1G053380.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	68.26	66.64
KRH47220	Soybean	plasma membrane	43.96	66.56
HORVU3Hr1G071470.1	Barley	cytosol, mitochondrion, nucleus, plasma membrane	66.53	66.53
TraesCS3D01G272200.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.46	66.46
KXG32860	Sorghum	plasma membrane	67.29	66.23
EER98908	Sorghum	cytosol, nucleus, plasma membrane	67.01	66.05
Os01t0609000-00	Rice	plasma membrane	67.29	66.01
TraesCS5D01G190600.1	Wheat	cytosol, nucleus, plasma membrane	65.69	65.33
HORVU5Hr1G056280.6	Barley	cytosol, nucleus, plasma membrane	65.49	65.03
TraesCS5B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	65.35	64.99
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.46	64.84
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	70.97	64.68
TraesCS5A01G185500.1	Wheat	cytosol, nucleus, plasma membrane	62.57	64.54
TraesCS3B01G523700.1	Wheat	mitochondrion	47.92	64.49
TraesCS3B01G524400.1	Wheat	cytosol, peroxisome, plasma membrane	64.38	64.46
TraesCS3D01G474700.1	Wheat	cytosol, nucleus, plasma membrane	64.38	64.15
EER98758	Sorghum	cytosol, nucleus, plasma membrane	64.51	64.11
Zm00001d044442_P036	Maize	plasma membrane	70.07	64.1
TraesCS3A01G479800.1	Wheat	cytosol, nucleus, plasma membrane	64.31	64.08
HORVU3Hr1G105140.4	Barley	cytosol, peroxisome, plasma membrane	64.24	63.97
TraesCS2B01G149900.1	Wheat	cytosol, peroxisome, plasma membrane	55.14	63.93
TraesCS2D01G130000.1	Wheat	cytosol, peroxisome, plasma membrane	62.64	63.03
KXG20401	Sorghum	plasma membrane	62.99	62.55
Os09t0333000-00	Rice	plasma membrane	34.79	61.7
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	68.33	61.08
PGSC0003DMT400068277	Potato	cytosol	56.18	60.55
PGSC0003DMT400050166	Potato	plastid	58.26	60.27
PGSC0003DMT400060396	Potato	plastid	61.11	59.54
PGSC0003DMT400050158	Potato	cytosol, peroxisome, plasma membrane	59.72	59.47
TraesCS2A01G127800.1	Wheat	cytosol, peroxisome, plasma membrane	32.22	58.96
Os09t0332300-00	Rice	plasma membrane	33.47	58.35
PGSC0003DMT400067210	Potato	plasma membrane	56.39	57.71
PGSC0003DMT400006729	Potato	plastid	59.44	57.07
TraesCS6D01G094800.1	Wheat	plasma membrane	36.25	56.37
TraesCS6A01G107100.1	Wheat	mitochondrion, plasma membrane	49.17	56.28
PGSC0003DMT400060117	Potato	cytosol	39.03	55.37
Os01t0516900-00	Rice	plasma membrane	25.97	53.28
PGSC0003DMT400046986	Potato	plasma membrane	32.64	52.81

Protein Annotations

EntrezGene:102584018	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	ProteinID:AAR25791	ProteinID:AAR25791.1
InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	EMBL:AY450631
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	UniProt:M1CWC8
InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510
EnsemblPlantsGene:PGSC0003DMG401029631	PGSC:PGSC0003DMG401029631	EnsemblPlants:PGSC0003DMT400076208	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF444
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002958C7C	RefSeq:XP_006360347.1	SEG:seg

Description

Pleiotropic drug resistance protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG401029631]

Coordinates

chr9:+:58528872..58537605

Molecular Weight (calculated)

162574.0 Da

IEP (calculated)

7.032

GRAVY (calculated)

0.063

Length

1440 amino acids

Sequence
(BLAST)

0001: MEPANLGNLR GSSLRGSISG SRRGSVSLRA NSNSIWRNTG VEIFSRSARD EDDEEALKWA ALEKLPTFDR LRKGLLFGSQ GAAAEIDIND IGYQERKNLL
0101: ERLVRVAEED NEKFLLKLKN RIDRVGIDLP TIEVRYENLN IEADAYVGSR GLPTVINFMT NFIETLLNTL HILPSSKRQI TILKDISGII KPCRMTLLLG
0201: PPSSGKTTLL LALAGKLDSS LKVTGKVSYN GHELHEFVPQ RTAAYISQHD LHIGEMTVRE TLEFSARCQG VGSRYEMLAE LSRREKAANI KPDPDIDIYM
0301: KASATEGQEA NVVTDYVLKI LGLDICADTM VGDEMLRGIS GGQKKRVTTG EMLVGPSKAL FMDEISTGLD SSTTYSIVNS LRQSVQILKG TAVISLLQPA
0401: PETYNLFDDI ILISDGYIVY QGPRDDVLEF FESMGFKCPE RKGVADFLQE VTSKKDQPQY WSRRNEHYRF ISSKEFSDAF QSFHVGRKLG DELAIPFDRT
0501: KCHPAALTNE KYGIGKKELL KVCTEREYLL MKRNSFVYVF KFVQLTIMAL MTMTLFFRTE MPRDTVDDGG IYAGALFFVV VMIMFNGMSE MAMTIFKLPV
0601: FYKQRDLLFF PSWAYAIPSW ILKIPVTLVE VGLWVILTYY VIGFDPNITR FLKQFLLLVL VNQMASGLFR FMGAVGRTMG VASTFGAFAL LLQFALCGFV
0701: LSREDVKGWW IWGYWISPLM YSVNSILVNE FDGNKWKHIA PNGTEPLGVA VVKSRGFFAD AYWYWIGFAA LFGFTIVFNF FYSLALAYLK PYGKSQTVRP
0801: EDSENAENGQ AASQMASTDG GDIVSAGQSK KKGMVLPFEP HSITFDDVVY SVDMPQEMKE QGAGEDRLVL LKGVSGAFRP GVLTALMGVS GAGKTTLMDV
0901: LAGRKTGGYI DGDIKISGYP KKQETFARIS GYCEQNDIHS PYVTVYESLV YSAWLRLPKD VDEKIRKMFV DEVMELVELE PLRSALVGLP GVNGLSTEQR
1001: KRLTIAVELV ANPSIIFMDE PTSGLDARAA AIVMRTVRNT VDTGRTVVCT IHQPSIDIFE AFDELFLMKR GGQEIYVGPL GRHSCHLIKY FESIPGVAKI
1101: KEGYNPATWM LEVTASAQEM MLGVDFTDLY KNSDLYRRNK ALITELSVPR PGSKDLYFET QYSQSLWIQC MACLWKQNWS YWRNPAYTAV RFIFTMFIAL
1201: VFGTMFWDIG TKVSQSQDLF NAMGSMYAAV LFLGVQNASS VQPVVDVERT VFYRERAAGM YSAIPYAFGQ VFIEIPYVFV QAIVYGIIVY AMIGFEWETG
1301: KVFWYLFIMY TTLLYFTFYG MMSVAVTPNQ NVASIVAAFF YAIWNLFSGF IVPRPRMPIW WRWYYWCCPV AWTLYGLVAS QFGDIQTKLV DEETVEQFLR
1401: RYFGFRHDFL PVVAGVLVAY VVVFAFTFAF AIKAFNFQRR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.