Factsheet for PGSC0003DMT400050158

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g007280.1.1	Tomato	plastid	88.31	86.99
PGSC0003DMT400060396	Potato	plastid	82.85	81.06
CDY65389	Canola	cytosol	4.36	78.75
PGSC0003DMT400060117	Potato	cytosol	54.29	77.34
PGSC0003DMT400050166	Potato	plastid	69.85	72.56
KRH34743	Soybean	plasma membrane	60.24	72.1
CDX79673	Canola	cytosol, peroxisome, plasma membrane	60.51	71.66
VIT_13s0074g00680.t01	Wine grape	plastid	73.03	71.54
PGSC0003DMT400068277	Potato	cytosol	65.7	71.11
KRG92040	Soybean	extracellular	70.89	69.54
KRH71633	Soybean	nucleus	70.61	68.99
CDY43723	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	69.02	68.69
AT2G36380.1	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	68.4	68.07
Bra023065.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	67.15	67.95
AT1G66950.1	Thale cress	plastid	68.19	67.81
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	28.28	65.44
Os02t0318500-00	Rice	plasma membrane	19.99	63.24
HORVU7Hr1G037750.8	Barley	cytosol, plasma membrane	48.2	62.74
TraesCS5A01G447200.1	Wheat	plasma membrane	53.87	62.62
Os07t0522500-01	Rice	plasma membrane	21.51	62.58
TraesCS5D01G023400.1	Wheat	plasma membrane	35.82	62.48
GSMUA_Achr8P07660_001	Banana	mitochondrion, peroxisome, plasma membrane	66.11	61.8
PGSC0003DMT400076209	Potato	plasma membrane	60.79	61.34
KXG37059	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	59.41	61.18
TraesCS7A01G183900.1	Wheat	plasma membrane	58.37	61.16
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	52.56	61.04
HORVU5Hr1G124650.12	Barley	plasma membrane	31.95	60.87
TraesCS7D01G185700.2	Wheat	plasma membrane	55.46	60.8
TraesCS4A01G331100.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	60.24	60.32
TraesCS7B01G088800.1	Wheat	plastid	60.37	60.17
TraesCS5A01G016200.1	Wheat	mitochondrion	59.68	60.14
PGSC0003DMT400076208	Potato	plastid	59.47	59.72
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	59.27	59.72
CDX84561	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	67.36	59.72
TraesCS2B01G606700.2	Wheat	plastid	60.37	59.71
Zm00001d025012_P003	Maize	plastid	60.65	59.7
Zm00001d021647_P003	Maize	plastid	59.68	59.68
TraesCS5B01G572600.1	Wheat	plastid	59.82	59.53
TraesCS5D01G564000.1	Wheat	plastid	59.89	59.52
Zm00001d009037_P003	Maize	plastid	60.17	59.39
TraesCS7B01G000200.1	Wheat	plastid	59.82	59.37
KXG36359	Sorghum	plastid	59.68	59.23
TraesCS5D01G452500.1	Wheat	plastid	59.34	59.13
TraesCS5B01G449500.1	Wheat	plastid	59.41	59.12
TraesCS2D01G051800.1	Wheat	plasma membrane	56.64	58.5
Zm00001d034940_P003	Maize	plastid	59.96	58.19
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	48.76	57.93
HORVU5Hr1G106850.1	Barley	cytosol	59.27	57.29
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	5.95	56.58
Os11t0587600-01	Rice	plasma membrane	26.0	56.54
PGSC0003DMT400067210	Potato	plasma membrane	53.32	54.8
PGSC0003DMT400006729	Potato	plastid	56.78	54.73
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	58.85	53.86
PGSC0003DMT400046986	Potato	plasma membrane	31.12	50.56
Bra017241.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	69.02	43.96
Os07t0522600-02	Rice	plasma membrane	0.07	0.16

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
InterPro:IPR003439	UniProt:M1BPV2	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061
PFAM:PF08370	PFAM:PF14510	EnsemblPlantsGene:PGSC0003DMG400019477	PGSC:PGSC0003DMG400019477	EnsemblPlants:PGSC0003DMT400050158	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF261	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000295349B
SEG:seg	:	:	:	:	:

Description

ATP-binding cassette transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400019477]

Coordinates

chr11:-:5021794..5029583

Molecular Weight (calculated)

164235.0 Da

IEP (calculated)

7.226

GRAVY (calculated)

0.048

Length

1446 amino acids

Sequence
(BLAST)

0001: MSIGSRSTSW TSPGVREMYG TAPGSDVFER STRENDDELE LKWAAIERLP TYDRLRKGIL KQTLDDGETN YHEVDLVHLG LQDRKQLLEG ILKLVEEDNE
0101: RFLRRYRDRT DRVGIEIPKV EVRFEHLCID GDAYVGSRAL PTLWNASINF VEGFLQKIKI IPSKKRVVNI LRDVNGIVRP SRMTLLLGPP GAGKTTLLKA
0201: LAGVPDKDLR VNGRISYCGH DLSEFIPQRT CAYISQHDIH HGEMTVRETL DFTGRCLGVG TRNELLTELS RREKDVGIKP DPEMDAYLKA TAVAGQESSL
0301: VTDYVLKILG MDICADILVG DDMRRGISGG QKKRLTTGEM LVGPAKVFYM DEISTGLDSS TTFQIVKYMR QMVHIMDVTM IISLLQPAPE TYDLFDDIIL
0401: LSEGKIIYQG PRENVLEFFE SVGFKCPERK GVADFLQEVT SLKDQEQYWF RRNEPYKYIS VAEFVERFTN FHVGQQLFDE LGVPYDKRKT HPAALVTEKY
0501: GISNMELFKA CLSREWLLMK RNSFLYIFKT FQITVTSIIT FTVFFRTEMK TGQIADGGKF YGALFFSLIN IMFNGTAELA LTIIRLPVFY KQRDSLFYPA
0601: WAFALPIWLL RIPLSFVESL IWIVLTYYTI GFAPAASRFF RQFLAFFALH LSALSLFRFI AALGRTQVVA STFTTFTILI VFVLGGFIVA KDDLEPWMQW
0701: GYYISPMTYG QNAIAINEFL DERWSTPNND TRFSEPTVGK VLLKARSMYT EDHVFWLCVV ALFAFSFLFN FCFILALTYL NPLGDSRSVI SDDDRSKKKK
0801: QTERSSPNST PMTEGISRGA RDTNSSSSEE AKKRGMVLPF QPLSLAFNHM NYYVNMPAEM KVQGVEDTRL QLLRNVSGAF RPGVLTALVG VSGAGKTTLM
0901: DVLAGRKTEG SIEGSISISG YPKNQSTFAR ISGYCEQNDI HSPHVTVYES LVYSAWLRLS PDVKKQTRKN FVEEVMDLVE LNSLRDSLVG LPGVDGLSTE
1001: QRKRLTIAVE LVANPSIIFM DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELLLM KRGGQVIYAG PLGHHSHLLI EYFQSVPGVP
1101: EIKEGINPAT WMLDVSATAV EAQLQVDFAD IYANSELYRR NQELIKELSV PTPGSQDLHF PTKFSQPFFE QCKACFWKQH LSYWRHPQYN AIRFAMTTMI
1201: GVIFGIIFWD KGNQLSKQQD LLNIIGAIYA AVMFLGGTNT SAVQSVVAIE RTVFYREKAA GMFSALPYAF AQVVIETIYI AIQTFIYSLI LFAMIGFQFT
1301: AGKFFLFYFF VFMCFVYFTM YGMMLVALTP NYHIAAIVMS FFLSFWNLFS GFIISRTQIP IWWRWYYWGS PVAWTIYGLV TSQVGDKSNL IEIPGGGEVS
1401: LKLYLKESYG FEYDFLGVVA AMHVVWAVFF CFVFAYAIKF LNFQRR

Best Arabidopsis Sequence Match ( AT2G36380.1 )
(BLAST)

0001: MLGRDEDLVR TMSGRGSLGS TSHRSLAGAA SKSFRDVFAP PTDDVFGRSD RREEDDVELR WAALERLPTY DRLRKGMLPQ TMVNGKIGLE DVDVTNLAPK
0101: EKKHLMEMIL KFVEEDNEKF LRRLRERTDR VGIEVPKIEV RYENLSVEGD VRSASRALPT LFNVTLNTIE SILGLFHLLP SKKRKIEILK DISGIIKPSR
0201: MTLLLGPPSS GKTTLLQALA GKLDDTLQMS GRITYCGHEF REFVPQKTCA YISQHDLHFG EMTVRESLDF SGRCLGVGTR YQLLTELSRR EREAGIKPDP
0301: EIDAFMKSIA ISGQETSLVT DYVLKLLGLD ICADTLVGDV MRRGISGGQR KRLTTGEMLV GPATALFMDE ISTGLDSSTT FQICKFMRQL VHIADVTMVI
0401: SLLQPAPETF ELFDDIILLS EGQIVYQGSR DNVLEFFEYM GFKCPERKGI ADFLQEVTSK KDQEQYWNRR EHPYSYVSVH DFSSGFNSFH AGQQLASEFR
0501: VPYDKAKTHP AALVTQKYGI SNKDLFKACF DREWLLMKRN SFVYVFKTVQ ITIMSLIAMT VYFRTEMHVG TVQDGQKFYG ALFFSLINLM FNGMAELAFT
0601: VMRLPVFFKQ RDFLFYPPWA FALPGFLLKI PLSLIESVIW IALTYYTIGF APSAARFFRQ LLAYFCVNQM ALSLFRFLGA LGRTEVIANS GGTLALLVVF
0701: VLGGFIISKD DIPSWLTWCY YTSPMMYGQT ALVINEFLDE RWGSPNNDTR INAKTVGEVL LKSRGFFTEP YWFWICIGAL LGFTVLFNFC YIIALMYLNP
0801: LGNSKATTVV EEGKDKHKGS HSGTGGSVVE LTSTSSHGPK KGMVLPFQPL SLAFNNVNYY VDMPAEMKAQ GVEGDRLQLL RDVGGAFRPG VLTALVGVSG
0901: AGKTTLMDVL AGRKTGGYVE GSINISGYPK NQATFARVSG YCEQNDIHSP HVTVYESLIY SAWLRLSADI DTKTREMFVE EVMELVELKP LRNSIVGLPG
1001: VDGLSTEQRK RLTIAVELVA NPSIIFMDEP TSGLDARAAA IVMRTVRNTV DTGRTVVCTI HQPSIDIFES FDELLLMKRG GQVIYAGTLG HHSQKLVEYF
1101: EAIEGVPKIK DGYNPATWML DVTTPSMESQ MSVDFAQIFV NSSVNRRNQE LIKELSTPPP GSNDLYFRTK YAQPFSTQTK ACFWKMYWSN WRYPQYNAIR
1201: FLMTVVIGVL FGLLFWQTGT KIEKEQDLNN FFGAMYAAVL FLGATNAATV QPAVAIERTV FYREKAAGMY SAIPYAISQV AVEIMYNTIQ TGVYTLILYS
1301: MIGYDWTVVK FFWFYYYMLT CFVYFTLYGM MLVALTPNYQ IAGICLSFFL SFWNLFSGFL IPRPQIPIWW RWYYWASPVA WTLYGIITSQ VGDRDSIVHI
1401: TGVGDMSLKT LLKNGFGFDY DFLPVVAVVH IAWILIFLFA FAYGIKFLNF QRR

Arabidopsis Description

ABCG34ABC transporter G family member 34 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC87]
SUBAcon: [mitochondrion,peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.