CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025012_P003	Maize	plastid	95.23	91.01
Zm00001d034940_P003	Maize	plastid	95.66	90.13
Zm00001d009037_P003	Maize	plastid	93.52	89.62
Os02t0318500-00	Rice	plasma membrane	27.56	84.68
TraesCS5A01G447200.1	Wheat	plasma membrane	74.15	83.68
HORVU7Hr1G037750.8	Barley	cytosol, plasma membrane	66.17	83.62
TraesCS7A01G183900.1	Wheat	plasma membrane	81.48	82.9
TraesCS7D01G185700.2	Wheat	plasma membrane	76.78	81.73
TraesCS5D01G023400.1	Wheat	plasma membrane	47.72	80.82
TraesCS7B01G088800.1	Wheat	plastid	82.27	79.6
HORVU5Hr1G124650.12	Barley	plasma membrane	42.52	78.66
TraesCS5B01G572600.1	Wheat	plastid	81.2	78.46
TraesCS7B01G000200.1	Wheat	plastid	81.05	78.11
TraesCS5D01G452500.1	Wheat	plastid	80.56	77.95
TraesCS5D01G564000.1	Wheat	plastid	80.63	77.8
TraesCS5A01G016200.1	Wheat	mitochondrion	79.42	77.7
TraesCS5B01G449500.1	Wheat	plastid	80.06	77.36
TraesCS2B01G606700.2	Wheat	plastid	80.2	77.02
TraesCS4A01G331100.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	78.49	76.32
Os11t0587600-01	Rice	plasma membrane	36.04	76.09
HORVU5Hr1G106850.1	Barley	cytosol	79.77	74.87
KXG36359	Sorghum	plastid	74.72	72.0
CDY65389	Canola	cytosol	3.99	70.0
KRH67874	Soybean	mitochondrion	29.06	65.28
CDX79673	Canola	cytosol, peroxisome, plasma membrane	54.99	63.23
VIT_08s0007g03710.t01	Wine grape	plastid	64.25	62.16
VIT_06s0061g01490.t01	Wine grape	plastid	63.03	60.87
PGSC0003DMT400068277	Potato	cytosol	57.91	60.85
KRH34743	Soybean	plasma membrane	51.92	60.35
CDY43723	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	62.11	60.01
KRH67876	Soybean	plasma membrane	32.69	59.69
PGSC0003DMT400050158	Potato	cytosol, peroxisome, plasma membrane	61.18	59.41
AT2G36380.1	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	61.47	59.39
Bra023065.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	60.4	59.34
AT1G66950.1	Thale cress	plastid	60.68	58.6
Solyc11g007280.1.1	Tomato	plastid	61.18	58.52
Solyc11g067000.1.1	Tomato	extracellular, plastid	60.9	58.44
EES03260	Sorghum	plasma membrane	53.21	58.36
VIT_13s0074g00680.t01	Wine grape	plastid	61.18	58.2
GSMUA_Achr8P07660_001	Banana	mitochondrion, peroxisome, plasma membrane	63.96	58.05
PGSC0003DMT400050166	Potato	plastid	57.48	57.97
KRH71633	Soybean	nucleus	60.97	57.84
Solyc05g055330.2.1	Tomato	plastid	60.4	57.37
PGSC0003DMT400060396	Potato	plastid	60.4	57.37
Solyc11g007300.1.1	Tomato	plastid	59.76	57.31
EES04729	Sorghum	mitochondrion	57.98	56.45
KRG92040	Soybean	extracellular	59.19	56.38
EES08826	Sorghum	mitochondrion	56.41	55.19
OQU76555	Sorghum	mitochondrion, plasma membrane	50.64	54.99
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	56.55	54.72
KXG32865	Sorghum	plasma membrane	56.48	54.39
EER98758	Sorghum	cytosol, nucleus, plasma membrane	55.98	54.24
PGSC0003DMT400060117	Potato	cytosol	39.17	54.19
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	56.34	54.07
EER98908	Sorghum	cytosol, nucleus, plasma membrane	56.05	53.87
KXG32860	Sorghum	plasma membrane	56.13	53.86
EES00201	Sorghum	plasma membrane	53.28	52.45
KXG20401	Sorghum	plasma membrane	53.85	52.14
CDX84561	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	60.47	52.05
OQU80771	Sorghum	plasma membrane	43.52	52.04
OQU81756	Sorghum	plasma membrane	46.01	51.39
EES01392	Sorghum	cytosol, peroxisome, plasma membrane	53.21	50.44
OQU89274	Sorghum	plasma membrane	34.33	49.18
OQU91497	Sorghum	cytosol, nucleus, plasma membrane	44.94	45.69
Bra017241.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	62.11	38.41

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1B6QGM5	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2
InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	EnsemblPlants:KXG37059	ProteinID:KXG37059
ProteinID:KXG37059.1	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370
PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF214	SMART:SM00382	EnsemblPlantsGene:SORBI_3001G000400
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00081AC136	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:24287..42443

Molecular Weight (calculated)

158146.0 Da

IEP (calculated)

7.540

GRAVY (calculated)

0.088

Length

1404 amino acids

Sequence
(BLAST)

0001: MEKLPTYDRM RQGILRQALA AGDQQQSGGV EVVDIQKLAG GDGGRELLER LFQDDSERFL RRLRDRIDMV GIELPTIEVR YEQLNVEADV IAAGRALPTL
0101: WNAATNLFEG LIGRFGSSNK RNITILKNVN GILKPSRMTL LLGPPSSGKS TLMRALAGKL DKNLKVSGSI TYCGHPISEF YPERTSAYVG QYDLHNAEMT
0201: VRETLDFSRR CLGIGARYEM IAELARRERD AGIKPDPEID AFMKATAVQG QETNIITDLT LKVLGLDICA DVIIGDEMIR GISGGQKKRV TTGEMLTGPA
0301: RALFMDEIST GLDSSSTFQI VKFMRQLVHV MNETVMISLL QPPPETYNLF DDIILLSEGY IVYHGPRENI LEFFESAGFR CPDRKGVADF LQEVTSKKDQ
0401: QQYWYLDQEQ YHYVSVPDFA QRFKSFHACQ QMQKELQIPF EKSKTHPAAL TTRKYGLSSW ESLKAVMSRE QLLMKRNSFI YIFKVTQLII LALMSMTVFL
0501: RTKMPHGQIA DGTKFFGALT FGLITIMFNG FAELQLTIKK LPVFYKHRDF LFFPAWTLGV ANIILKVPVS LVESAVWVAL TYYVMGFAPA AGRFFRQFIA
0601: FFATHQMAMA LFRFLGAILK TMVVANTFGM FVLLIIFIFG GFVIRRNDIK PWWIWGYWAS PMMYSQNAIS INEFLASRWA IPNNDTTIDA PTVGKAILKS
0701: KGLFTGEWGF WLSIGALIGF IILFNMLYIW ALTYLSPSSG SNALVSEGED DVSEMVLKGR SKDARSEDEI SQAVYSDPGT NGATNTLAES RVTLPFQPLS
0801: LCFNHVNYYV DMPAEMKEQG FTESRLQLLS DISGAFRPGV LTALVGVSGA GKTTLMDVLA GRKTSGAIEG DITLSGFPKK QETFARISGY CEQTDIHSPN
0901: VTVFESITYS AWLRLSSDID DGTKKMFVEE VMALVELDVL RDALVGLPGV SGLSTEQRKR LTIAVELVAN PSIIFMDEPT SGLDARAAAI VMRTVRNTVN
1001: TGRTVVCTIH QPSIDIFESF DELLLLKRGG QVIYAGELGR HSHKLVEYFE AIPGVPKITE GYNPATWVLE VSSPLSEARL NMNFAEIYAN SVLYRKNQEL
1101: IKELSIPPPD YQDLSFPTKY SQNFYGQCIS NFWKQYRSYW KNPPYNAMRY LMTFLFGLVF GTVFWQKGKN IDSQQDLYNL LGATYAATFF LGASNCITVQ
1201: PVVSIERAVF YREKAAGMYS PLSYAFAQTC VEVIYNVLQG ILYTVIIYAM IGYDWKADKF FYFLFFITAS FNYFTLFGMM LVACTPSALL ANIFITFALP
1301: LWNLFAGFLI VRPAIPIWWR WYYWANPVSW TIYGVVASQF GENEGELSVP GGSGKPVVVK QFLKDNLGIQ HDFLGYVVLV HFAYIIAFFF VFGYSIKFFN
1401: FQKR

Best Arabidopsis Sequence Match ( AT1G66950.1 )
(BLAST)

0001: MAAMLGRDED PVGALSGRVS LASTSHRSLV GASKSFRDVF MPQTDEVFGR SERREEDDME LRWAAIERLP TFDRLRKGML PQTSANGKIE LEDIDLTRLE
0101: PKDKKHLMEM ILSFVEEDNE KFLRDLRERT DRVGIEVPKI EVRYENISVE GDVRSASRAL PTLFNVTLNT LESILGFFHL LPSKRKKIQI LKDISGIVKP
0201: SRMTLLLGPP SSGKTTLLQA LAGKLDDTLQ MSGRITYCGH EFREFVPQKT CAYISQHDLH FGEMTVREIL DFSGRCLGVG SRYQLMSELS RREKEEGIKP
0301: DPKIDAFMKS IAISGQETSL VTDYVLKILG LDICADILAG DVMRRGISGG QKKRLTTGEM LVGPARALFM DEISTGLDSS TTFQICKFMR QLVHISDVTM
0401: IISLLQPAPE TFELFDDIIL LSEGQIVYQG PRDNVLEFFE YFGFQCPERK GVADFLQEVT SKKDQEQYWN KREQPYNYVS VSDFSSGFST FHTGQKLTSE
0501: FRVPYDKAKT HSAALVTQKY GISNWELFKA CFDREWLLMK RNSFVYVFKT VQITIMSLIT MTVYLRTEMH VGTVRDGQKF YGAMFFSLIN VMFNGLAELA
0601: FTVMRLPVFY KQRDFLFYPP WAFALPAWLL KIPLSLIESG IWIGLTYYTI GFAPSAARFF RQLLAYFCVN QMALSLFRFL GAIGRTEVIS NSIGTFTLLI
0701: VFTLGGFIIA KDDIRPWMTW AYYMSPMMYG QTAIVMNEFL DERWSSPNYD TRINAKTVGE VLLKSRGFFT EPYWFWICIV ALLGFSLLFN LFYILALMYL
0801: NPLGNSKATV VEEGKDKQKG ENRGTEGSVV ELNSSSNKGP KRGMVLPFQP LSLAFNNVNY YVDMPSEMKA QGVEGDRLQL LRDVGGAFRP GILTALVGVS
0901: GAGKTTLMDV LAGRKTGGYI EGSISISGYP KNQTTFARVS GYCEQNDIHS PHVTVYESLI YSAWLRLSTD IDIKTRELFV EEVMELVELK PLRNSIVGLP
1001: GVDGLSTEQR KRLTIAVELV ANPSIIFMDE PTSGLDARAA AIVMRTVRNT VDTGRTVVCT IHQPSIDIFE SFDELLLMKR GGQVIYAGSL GHHSQKLVEY
1101: FEAVEGVPKI NDGYNPATWM LDVTTPSMES QMSLDFAQIF SNSSLYRRNQ ELIKDLSTPP PGSKDVYFKT KYAQSFSTQT KACFWKQYWS YWRHPQYNAI
1201: RFLMTVVIGV LFGLIFWQIG TKTENEQDLN NFFGAMYAAV LFLGALNAAT VQPAIAIERT VFYREKAAGM YSAIPYAISQ VAVEIMYNTI QTGVYTLILY
1301: SMIGCNWTMA KFLWFYYYML TSFIYFTLYG MMLMALTPNY QIAGICMSFF LSLWNLFSGF LIPRPQIPIW WRWYYWATPV AWTLYGLITS QVGDKDSMVH
1401: ISGIGDIDLK TLLKEGFGFE HDFLPVVAVV HIAWILLFLF VFAYGIKFLN FQRR

Arabidopsis Description

ABCG39ABC transporter G family member 39 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.