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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plastid 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr1P14530_001 Banana mitochondrion, plasma membrane 57.66 73.27
KXG32865 Sorghum plasma membrane 70.83 70.44
KXG32863 Sorghum cytosol, peroxisome, plasma membrane 70.41 70.37
EES03255 Sorghum cytosol, peroxisome, plasma membrane, plastid 70.62 69.99
PGSC0003DMT400005785 Potato cytosol, peroxisome, plasma membrane 30.07 69.76
EES03260 Sorghum plasma membrane 61.24 69.38
Solyc12g019640.1.1 Tomato plasma membrane 28.76 68.59
GSMUA_Achr9P02950_001 Banana plasma membrane 65.59 68.47
KXG32860 Sorghum plasma membrane 69.03 68.42
GSMUA_Achr6P34530_001 Banana plasma membrane 61.93 68.08
EER98908 Sorghum cytosol, nucleus, plasma membrane 67.93 67.42
VIT_09s0002g05370.t01 Wine grape mitochondrion, plasma membrane 65.1 66.43
VIT_09s0002g05560.t01 Wine grape plasma membrane 65.31 65.13
VIT_04s0008g04790.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 64.28 64.9
EER98758 Sorghum cytosol, nucleus, plasma membrane 64.76 64.8
KRH16029 Soybean cytosol 64.41 64.55
KRH52503 Soybean cytosol, peroxisome, plasma membrane 64.34 64.43
KRH47506 Soybean endoplasmic reticulum 63.24 64.31
Solyc08g067620.2.1 Tomato nucleus 64.34 64.21
KRH61824 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 64.07 64.11
PGSC0003DMT400048449 Potato cytosol, peroxisome, plasma membrane 53.72 64.01
KRH05088 Soybean endoplasmic reticulum 63.45 63.58
KRH09797 Soybean endoplasmic reticulum 62.55 63.56
KRH23522 Soybean mitochondrion 62.34 63.39
PGSC0003DMT400034130 Potato cytosol, mitochondrion, peroxisome, plasma membrane, plastid 54.41 63.37
Solyc09g091660.2.1 Tomato plastid 62.62 63.06
PGSC0003DMT400076208 Potato plastid 62.55 62.99
PGSC0003DMT400061280 Potato cytosol, nucleus, plasma membrane, plastid 62.28 62.93
Solyc05g053590.2.1 Tomato cytosol, mitochondrion, peroxisome, plasma membrane 61.24 62.89
Solyc12g100180.1.1 Tomato mitochondrion, nucleus, plasma membrane, plastid 61.86 62.51
KRH67471 Soybean endoplasmic reticulum 62.28 62.49
CDY36570 Canola cytosol, nucleus, plasma membrane, plastid 60.83 62.42
Bra026124.1-P Field mustard cytosol, nucleus, plasma membrane, plastid 60.69 62.28
CDY39660 Canola cytosol, nucleus, plasma membrane 60.76 62.26
EES04729 Sorghum mitochondrion 61.86 62.21
Solyc12g098210.1.1 Tomato plastid 61.1 62.18
KRG95762 Soybean mitochondrion 61.17 62.03
PGSC0003DMT400076209 Potato plasma membrane 61.24 61.97
AT1G15520.1 Thale cress plastid 60.76 61.91
KRH09795 Soybean endoplasmic reticulum 62.76 60.19
EES08826 Sorghum mitochondrion 59.1 59.72
KRH47220 Soybean plasma membrane 38.9 59.31
PGSC0003DMT400005783 Potato cytosol, peroxisome, plasma membrane 64.34 59.05
PGSC0003DMT400043433 Potato endoplasmic reticulum, plasma membrane 6.0 57.24
OQU76555 Sorghum mitochondrion, plasma membrane 50.76 56.92
EES00201 Sorghum plasma membrane 55.45 56.38
KRG95752 Soybean cytosol, peroxisome, plasma membrane 60.0 54.0
KXG37059 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 52.14 53.85
Solyc12g019620.1.1 Tomato cytosol, nucleus, plasma membrane 30.9 53.52
OQU81756 Sorghum plasma membrane 45.72 52.74
EES01392 Sorghum cytosol, peroxisome, plasma membrane 53.31 52.19
KXG36359 Sorghum plastid 51.93 51.68
OQU80771 Sorghum plasma membrane 40.28 49.74
VIT_04s0008g04840.t01 Wine grape plasma membrane 35.03 45.4
OQU91497 Sorghum cytosol, nucleus, plasma membrane 43.03 45.18
OQU89274 Sorghum plasma membrane 30.48 45.1
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300UniProt:A0A194YLC7InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1InterPro:ABCG_PDR_2
InterPro:ABC_2_transInterPro:ABC_trans_NInterPro:ABC_transporter-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887InterPro:IPR003439EnsemblPlants:KXG20401ProteinID:KXG20401
ProteinID:KXG20401.1InterPro:P-loop_NTPaseInterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370
PFAM:PF14510PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF351SMART:SM00382EnsemblPlantsGene:SORBI_3010G196900
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0007F20AAESEG:seg::
Description
hypothetical protein
Coordinates
chr10:+:54005238..54018674
Molecular Weight (calculated)
162104.0 Da
IEP (calculated)
7.142
GRAVY (calculated)
0.154
Length
1450 amino acids
Sequence
(BLAST)
0001: MAHSTAAPHS ATIAVRRPHA GGGGGGGDEE EDEVRLWAAL ERLPTAQRAR TALVDGDGAC GKAVVDVGEL GLAQRRALLD RLVGSVDRDN EGFLLKLRER
0101: IDRVGIVLPT IEVRFKHLKV DAEVHIGTRG LPTILNSITN IFEGVANALH ILPSRKQTIP ILNGISGIIK PQRMTLLLGP PGSGKTTLLL ALSGRLGKSL
0201: KVSGKVTYNG HEMDDFVPQR TAAYVSQHDL HIGEMTVRET LAFSARCQGV GYFYDLLCEL LRREKEANIK PDADLDAFMK AAALGGHKAN VVVEYMLRIL
0301: GLEACADTMV GDEMFRGISG GQRKRVTAGE ILVGSAKALF MDEISNGLDS STTFQIINSL RQAIHILSGT AVISLLQPAP EIYNLFDDIL LLSDGQIVYH
0401: GPREDVLDFF ESIGFRCPDR KGVADFLQEV TSKKDQKQYW AQHDQTYCYI SVKEFADSFR SFRVGQAMTN EISVSFDKSM NQPSVLATSK YGTSAKELLK
0501: ANIDREILLM KRNSFFYMFR VVQLILLSVI EMTLFFRSKM HRDSVANGGI YMGALFFTTL VIIFNGFSEL TLTILKLPIF FKQRDLHFYP AWTYTVPSWI
0601: LKIPITFLEV GGFVFITYYA IGFDPDVVRL FKQYLLFLAA NQMAASLFRF IAGAARNMIV AYVFGSFAVL VVMLLGGFVL SREDMNKLWI WGYWTSPMMY
0701: AQNAISVNEF LGQSWQKVLP GSTEPLGVLI LKSHGIFPEA KWYWIGFGAL LGFTLLFNSL FTLCLAYLKS YGHSYPSVSE ETLKEKHANL TGMTIDVSLH
0801: KEKEFGCSCQ SYESACQDIG NYNETSLAST DTNYMSARRG MIFPFAPLSL TFDGIRYSVD VPQEMKTQVL EDKLEILKGV SGSFRPGVLT ALMGISGAGK
0901: TTLMDVLAGR KTNGYIKGSI SISGYPKKQE TFARVSGYCE QDDIHSPHVT VHESLLFSAW LRLPGDVSWR TRKMFIEEVM ELVELTPVRE ALVGLPRVNG
1001: LSIEQRKRLT IAVELVANPS IIFMDEPTSG LDARAAAIVM RTVRNTVDTG RTVVCTIHQP SIDIFEAFDE LLLLKQGGEE IYFGPLGRHS SEMIEYFEGI
1101: EGIGKIEDGY NPATWMLEVT TVTQEFVLGV DFSDIYKNSE LCQRNKVLIH ELSTPPAGSS DLHFSTTHSR SFFTQCLACL WKQNLSYWRN PQYNAVRFFF
1201: TAVIALLFGT IFWGIGTKRE KPQDVFNAMG SMYAAVLTMG VLNAATVQPV VSVERTAFYR ERAAGMYSAF PYAFGQVVIE LPYTLVQTCI YSVIVYAMMG
1301: FKWTFAKFFW NLFFMYFTLL YFTFCGMMAI GLTQNHHIAS IVSAAFHATW NLFSGFLIPQ TKIPIWWRWY YWLCPVAWSL YGMVVSQYGD DVDTPLFDGV
1401: TNTTVANFVR DYLGFDHSFL GVVAMVVVAF GLLFALLFGV AIMKLNFQRK
Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.