Factsheet for VIT_04s0008g04790.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

plastid 2
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	36.14	83.04
Solyc08g067620.2.1	Tomato	nucleus	80.5	79.56
KRH52503	Soybean	cytosol, peroxisome, plasma membrane	79.18	78.52
KRH61824	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	79.04	78.33
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	60.59	76.25
Solyc12g019640.1.1	Tomato	plasma membrane	31.89	75.33
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	73.4	74.17
KRH05088	Soybean	endoplasmic reticulum	74.09	73.53
KRH16029	Soybean	cytosol	73.89	73.32
GSMUA_Achr6P34530_001	Banana	plasma membrane	67.2	73.16
GSMUA_Achr9P02950_001	Banana	plasma membrane	70.54	72.93
VIT_09s0002g05560.t01	Wine grape	plasma membrane	73.4	72.49
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	79.11	71.9
Os01t0609300-01	Rice	plasma membrane	64.28	71.38
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	60.1	70.91
Os08t0384500-01	Rice	plasma membrane	37.26	70.12
EES03260	Sorghum	plasma membrane	62.05	69.61
Os01t0342750-01	Rice	plasma membrane	33.84	69.33
TraesCS3A01G217900.1	Wheat	cytosol	69.99	69.12
TraesCS3D01G234400.1	Wheat	plasma membrane	69.99	69.12
TraesCS3B01G248400.1	Wheat	cytosol, peroxisome, plasma membrane	69.92	69.05
HORVU3Hr1G053350.8	Barley	vacuole	69.99	68.98
Zm00001d011315_P002	Maize	plasma membrane	69.36	68.98
GSMUA_Achr9P01490_001	Banana	plasma membrane	71.66	68.92
Os01t0609900-02	Rice	plasma membrane	66.36	68.66
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	69.36	68.64
KXG32865	Sorghum	plasma membrane	69.36	68.31
Os01t0609200-00	Rice	plasma membrane	69.57	68.24
TraesCS3B01G248500.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.73	68.12
TraesCS2A01G483300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.73	68.12
TraesCS3D01G234300.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.66	68.05
TraesCS3A01G218000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	68.66	68.05
TraesCS7B01G292700.1	Wheat	plasma membrane	67.41	67.69
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	68.94	67.67
HORVU7Hr1G092510.2	Barley	plasma membrane	67.55	67.31
TraesCS7A01G391100.1	Wheat	plasma membrane	67.62	67.29
TraesCS7D01G386600.1	Wheat	plasma membrane	67.62	67.2
TraesCS3B01G523700.1	Wheat	mitochondrion	50.07	67.2
Os01t0609000-00	Rice	plasma membrane	68.66	67.17
HORVU3Hr1G053380.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	68.87	67.05
Zm00001d011319_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	68.18	66.92
Zm00001d044443_P001	Maize	cytosol, mitochondrion, nucleus, plasma membrane	67.41	66.85
HORVU7Hr1G092380.8	Barley	cytosol	67.13	66.62
TraesCS3B01G524400.1	Wheat	cytosol, peroxisome, plasma membrane	66.23	66.13
TraesCSU01G097600.2	Wheat	plasma membrane	66.78	66.05
TraesCS7D01G386500.1	Wheat	plasma membrane	66.78	66.05
TraesCS7A01G391000.1	Wheat	plasma membrane	66.78	66.05
HORVU3Hr1G071470.1	Barley	cytosol, mitochondrion, nucleus, plasma membrane	66.23	66.04
KXG32860	Sorghum	plasma membrane	67.27	66.03
TraesCS3D01G474700.1	Wheat	cytosol, nucleus, plasma membrane	66.3	65.88
TraesCS2B01G149900.1	Wheat	cytosol, peroxisome, plasma membrane	56.96	65.86
TraesCS5D01G190600.1	Wheat	cytosol, nucleus, plasma membrane	66.36	65.81
TraesCS3A01G272800.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	65.95	65.76
TraesCS5B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	66.3	65.75
TraesCS3D01G272200.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	65.81	65.62
TraesCS3A01G479800.1	Wheat	cytosol, nucleus, plasma membrane	66.02	65.61
HORVU5Hr1G056280.6	Barley	cytosol, nucleus, plasma membrane	66.16	65.52
EER98758	Sorghum	cytosol, nucleus, plasma membrane	66.09	65.49
HORVU3Hr1G105140.4	Barley	cytosol, peroxisome, plasma membrane	65.95	65.49
EER98908	Sorghum	cytosol, nucleus, plasma membrane	66.5	65.37
TraesCS5A01G185500.1	Wheat	cytosol, nucleus, plasma membrane	62.95	64.76
KXG20401	Sorghum	plasma membrane	64.9	64.28
TraesCS2D01G130000.1	Wheat	cytosol, peroxisome, plasma membrane	64.0	64.22
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	65.74	63.96
Zm00001d044442_P036	Maize	plasma membrane	69.99	63.85
Os09t0333000-00	Rice	plasma membrane	36.0	63.67
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	36.56	62.72
VIT_08s0007g03710.t01	Wine grape	plastid	62.6	61.96
Os09t0332300-00	Rice	plasma membrane	35.17	61.14
VIT_06s0061g01490.t01	Wine grape	plastid	61.07	60.32
TraesCS6D01G094800.1	Wheat	plasma membrane	38.58	59.83
TraesCS6A01G107100.1	Wheat	mitochondrion, plasma membrane	52.02	59.38
TraesCS2A01G127800.1	Wheat	cytosol, peroxisome, plasma membrane	32.52	59.34
VIT_13s0074g00680.t01	Wine grape	plastid	60.1	58.47
VIT_06s0004g06560.t01	Wine grape	mitochondrion, plasma membrane	49.79	56.17
Os01t0516900-00	Rice	plasma membrane	26.53	54.27
VIT_04s0008g04840.t01	Wine grape	plasma membrane	41.92	53.8
VIT_14s0060g00470.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	52.37	51.93

Protein Annotations

EntrezGene:100250693	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2
InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	EMBL:AM452270	ProteinID:CAN80954	ProteinID:CAN80954.1
ProteinID:CBI20978	ProteinID:CBI20978.3	ncoils:Coil	UniProt:D7SUM9	EMBL:FN595231	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase
InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF443	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0001BE195C
ArrayExpress:VIT_04s0008g04790	EnsemblPlantsGene:VIT_04s0008g04790	EnsemblPlants:VIT_04s0008g04790.t01	unigene:Vvi.20316	RefSeq:XP_010648604.1	SEG:seg

Description

No Description!

Coordinates

chr4:-:4227017..4234518

Molecular Weight (calculated)

162274.0 Da

IEP (calculated)

8.452

GRAVY (calculated)

0.072

Length

1436 amino acids

Sequence
(BLAST)

0001: MESSDVYRVN SARLSSSNIW RNSGMEVFSR SSRDEDDEEA LKWAAIEKLP TYLRIRRGIL AEEEGKAREI DITSLGLIEK KNLLERLVKI AEEDNEKFLL
0101: KLKERIDRVG LDIPTIEVRF EHITVDAEAY IGGRALPTII NFSANMLEGF LNYLHILPSR KKPLPILHDV SGIIKPGRMT LLLGPPSSGK TTLLLTLAGK
0201: LGSDLKLSGR VSYNGHGMDE FVPQRSSAYI SQYDLHIGEM TVRETLAFSA RCQGVGTGYD MLAELSRREK VANIKPDPDI DIYMKAAALK GQGGSLITDY
0301: ILKILGLEVC ADTIVGDEMV RGISGGQKRR LTTGEMLVGP AKALFMDEIS TGLDSSTTFQ IVNSIRQSIH ILKGTAIISL LQPAPETYDL FDDIILLSDG
0401: QIVYQGPREN VLEFFEHMGF KCPERKGVAD FLQEVTSKKD QEQYWAHRGE PYSFVTVTEF SEAFQSFHVG RRLGDELAIP FDKAKAHTAA LTTKKYGVSK
0501: KELLKACISR ELLLMKRNSF VYIFKMSQLI LLAFIMMTLF LRTDMPRKTI ADGWIFLGSM FFTLMMIMFN GFSELALTIM KLPVFYKQRD LLFYPSWAYS
0601: LPTWILKIPI TLVEVAIWVF MTYYVVGFDP NIERFFRQYL LLLCVNQMAS GLLRLMAALG RNIIVANTFG SFALLAVLVM GGFVLSKDDV KPWWMWGYWI
0701: SPMMYGQNAI AVNEFLGKSW RHVPENATEP LGVLVLKSRG IFPEAYWYWL GVGALIGYVF LFNFLFTVAL AYLNPYGKHQ TVLSEETLTE QSSRGTSCTG
0801: GDKIRSGSSR SLSARVGSFN NADQNRKRGM ILPFEPLSIT FDEIRYAVDM PQEMKSQGIP ENRLELLKGV SGSFRPGVLT ALMGVSGAGK TTLMDVLAGR
0901: KTGGYIDGSI KISGYPKNQK TFARISGYCE QTDIHSPHVT VYESLLYSAW LRLPPEVDSA TRKMFIEEVM ELVELNSLRQ ALVGLPGVDG LSTEQRKRLT
1001: VAVELVANPS IIFMDEPTSG LDARAAAIVM RTVRNTVDTG RTVVCTIHQP SIDIFDAFDE LFLLKRGGEE IYAGPLGHHS AHLIKYFEGI DGVSKIKDGY
1101: NPATWMLEVT SAAQEAALGI NFTDVYKNSE LYRRNKALIK ELSTPPPGSK DLYFPTQYSQ SFFAQCKTCL WKQHWSYWRN PSYTAVRLLF TTFIALMFGT
1201: IFWDLGSRRQ RKQDLFNAMG SMYCAVLFIG AQNATSVQPV VAIERTVFYR EKAAGMYSAL PYAFGQVMIE LPYILIQTII YGVIVYAMIG FDWTMTKFFW
1301: YIFFMYFTFL YFTFYGMMAV AVSPNHNIAA IISSAFYAIW NLFSGFIVPR TRIPVWWRWY YWCCPISWTL YGLIGSQFGD MKDKLDTGET IEDFVRSYFG
1401: FRNDFLGIVA VVIVGITVLF GFTFAYSIRA FNFQKR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.