Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G524400.1 | Wheat | cytosol, peroxisome, plasma membrane | 96.82 | 97.36 |
| TraesCS3A01G479800.1 | Wheat | cytosol, nucleus, plasma membrane | 97.16 | 97.23 |
| TraesCS3D01G474700.1 | Wheat | cytosol, nucleus, plasma membrane | 97.03 | 97.09 |
| TraesCS3B01G523700.1 | Wheat | mitochondrion | 69.57 | 94.02 |
| HORVU5Hr1G056280.6 | Barley | cytosol, nucleus, plasma membrane | 84.92 | 84.69 |
| EER98758 | Sorghum | cytosol, nucleus, plasma membrane | 82.85 | 82.68 |
| Os09t0333000-00 | Rice | plasma membrane | 43.36 | 77.22 |
| GSMUA_Achr1P14530_001 | Banana | mitochondrion, plasma membrane | 59.47 | 75.37 |
| Os09t0332300-00 | Rice | plasma membrane | 40.53 | 70.94 |
| PGSC0003DMT400005785 | Potato | cytosol, peroxisome, plasma membrane | 30.22 | 69.92 |
| Solyc12g019640.1.1 | Tomato | plasma membrane | 29.18 | 69.41 |
| GSMUA_Achr9P02950_001 | Banana | plasma membrane | 66.67 | 69.4 |
| GSMUA_Achr6P34530_001 | Banana | plasma membrane | 62.66 | 68.69 |
| HORVU3Hr1G053350.8 | Barley | vacuole | 68.53 | 68.02 |
| HORVU3Hr1G071470.1 | Barley | cytosol, mitochondrion, nucleus, plasma membrane | 66.87 | 67.15 |
| VIT_09s0002g05370.t01 | Wine grape | mitochondrion, plasma membrane | 65.98 | 67.14 |
| KRH47506 | Soybean | endoplasmic reticulum | 65.98 | 66.9 |
| HORVU3Hr1G053380.1 | Barley | cytosol, mitochondrion, peroxisome, plasma membrane | 67.91 | 66.58 |
| HORVU7Hr1G092510.2 | Barley | plasma membrane | 66.32 | 66.55 |
| HORVU7Hr1G092380.8 | Barley | cytosol | 66.04 | 66.0 |
| VIT_04s0008g04790.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 65.49 | 65.95 |
| KRH23522 | Soybean | mitochondrion | 64.8 | 65.71 |
| KRH09797 | Soybean | endoplasmic reticulum | 64.8 | 65.66 |
| KRH61824 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 65.56 | 65.42 |
| VIT_09s0002g05560.t01 | Wine grape | plasma membrane | 65.7 | 65.34 |
| KRH52503 | Soybean | cytosol, peroxisome, plasma membrane | 65.42 | 65.33 |
| Solyc12g098210.1.1 | Tomato | plastid | 64.18 | 65.12 |
| Solyc05g053590.2.1 | Tomato | cytosol, mitochondrion, peroxisome, plasma membrane | 63.55 | 65.08 |
| PGSC0003DMT400034130 | Potato | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 55.95 | 64.98 |
| Solyc08g067620.2.1 | Tomato | nucleus | 64.8 | 64.49 |
| KRH16029 | Soybean | cytosol | 64.52 | 64.48 |
| PGSC0003DMT400048449 | Potato | cytosol, peroxisome, plasma membrane | 54.15 | 64.34 |
| Solyc09g091660.2.1 | Tomato | plastid | 63.97 | 64.24 |
| PGSC0003DMT400076208 | Potato | plastid | 63.97 | 64.24 |
| PGSC0003DMT400061280 | Potato | cytosol, nucleus, plasma membrane, plastid | 63.42 | 63.9 |
| PGSC0003DMT400043433 | Potato | endoplasmic reticulum, plasma membrane | 6.71 | 63.82 |
| KRH05088 | Soybean | endoplasmic reticulum | 63.76 | 63.72 |
| Solyc12g100180.1.1 | Tomato | mitochondrion, nucleus, plasma membrane, plastid | 63.14 | 63.62 |
| PGSC0003DMT400076209 | Potato | plasma membrane | 62.93 | 63.5 |
| KRH67471 | Soybean | endoplasmic reticulum | 63.14 | 63.18 |
| CDY39660 | Canola | cytosol, nucleus, plasma membrane | 61.76 | 63.11 |
| AT1G15520.1 | Thale cress | plastid | 62.03 | 63.04 |
| Bra026124.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 61.55 | 62.99 |
| CDY36570 | Canola | cytosol, nucleus, plasma membrane, plastid | 61.55 | 62.99 |
| KRG95762 | Soybean | mitochondrion | 62.1 | 62.8 |
| KRH47220 | Soybean | plasma membrane | 41.15 | 62.57 |
| HORVU6Hr1G036800.21 | Barley | plasma membrane | 62.1 | 62.02 |
| KRH09795 | Soybean | endoplasmic reticulum | 63.07 | 60.32 |
| PGSC0003DMT400005783 | Potato | cytosol, peroxisome, plasma membrane | 64.38 | 58.92 |
| HORVU7Hr1G037750.8 | Barley | cytosol, plasma membrane | 44.33 | 57.7 |
| HORVU3Hr1G022800.1 | Barley | plasma membrane | 55.88 | 56.46 |
| HORVU7Hr1G088630.1 | Barley | vacuole | 50.21 | 55.85 |
| HORVU5Hr1G124650.12 | Barley | plasma membrane | 29.18 | 55.6 |
| KRG95752 | Soybean | cytosol, peroxisome, plasma membrane | 61.0 | 54.75 |
| Solyc12g019620.1.1 | Tomato | cytosol, nucleus, plasma membrane | 31.33 | 54.12 |
| HORVU5Hr1G106850.1 | Barley | cytosol | 55.53 | 53.68 |
| HORVU7Hr1G056530.12 | Barley | cytosol, nucleus | 47.72 | 51.15 |
| HORVU7Hr1G016870.2 | Barley | cytosol | 49.1 | 51.01 |
| HORVU3Hr1G116680.1 | Barley | mitochondrion, plasma membrane | 44.19 | 50.51 |
| HORVU4Hr1G081040.4 | Barley | cytosol, nucleus, plasma membrane | 45.92 | 49.26 |
| HORVU5Hr1G049490.3 | Barley | nucleus, plastid | 46.06 | 47.78 |
| VIT_04s0008g04840.t01 | Wine grape | plasma membrane | 35.68 | 46.11 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | UniProt:A0A287MJ91 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans |
| InterPro:ABC_trans_N | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| EnsemblPlantsGene:HORVU3Hr1G105140 | EnsemblPlants:HORVU3Hr1G105140.4 | InterPro:IPR003439 | InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 |
| PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF306 |
| SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI000B46119A | SEG:seg | : |
Description
No Description!
Coordinates
chrchr3H:+:667663206..667693961
Molecular Weight (calculated)
162249.0 Da
IEP (calculated)
7.405
GRAVY (calculated)
0.005
Length
1446 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDDAGEIHRG FGGLRRGGSS NAFSRSSHHA DEHGDDEEAL RWAALERLPT RDRARTAVLD HFPGRDDGPR AVDVGRLGAG ERAALLRRVA SVADDHGRFL
0101: ARFKERVDRV GVELPTIEVR YENLCVEAEA YVGSRGLPTI LHTYANVLEG MTNSLHITPN RKQKISVLHN VSGTIKPHRM TLLLGPPGAG KTTLLLALAG
0201: TLPSSLEMSG KITYNGHTME EFVPRRSAAY VSQNDLHIGE LTVRETVNFS AKCQGSGHRF DLLMELSRRE KELNIKPDPE IDVYLKAAAT GEQKAEVVTN
0301: HILKILGLDI CADTIVGNNM LRGISGGQKK RVTTAEMLVT PGRALFMDEI STGLDSSTTF QIVNSIRQTI HTLGGTAVIS LLQPAPETYE LFDDIILLSD
0401: GQVVYNGPRE HVLEFFESAG FKCPERKGVA DFLQEVTSRK DQRQYWIHSD ETYQYVPVKN FAEAFQSFHV GQAIRSELAV PFDKSRSHPA ALKTSKYGAS
0501: MKELLKANIS REMLLMRRNS FVYIFKATQL TLMAIITMTV FLRTNMHHDS ITNGGIYMGA LFFGIVMIMF NGLAEVGLTV AKLPVFFKQR DLLFFPAWTY
0601: SLPSWIIKTP LSLLNASIWV FITYYVIGFD PNVERLFRQF LLLLVMSETA SGLFRFIAGL ARNQIVANTI GSFFLLICML TGGFVLSREN VKKWWIWGYW
0701: ISPLMYAQNA ISVNEFLGDS WNKTISGFKE PLGRLVLESR GMFTEAKWYW IGVGALLGYV LLFNALYTIC LTFLKPFDSN QQTISEETMK IKQANLTGEI
0801: LEEASGRQSN TATLDTVDEN NGESTSNNTT VDSCPSKKGM VLPFTPLSLT FEDIRYSVDM PEEVKAQGVK EDRLELLKGI SGSFRPGVLT ALMGVSGAGK
0901: TTLMDVLAGR KTSGYVEGSI TISGYPKKQE TFARVSGYCE QNDIHSPNVT VYESLAFSAW LRLPADVDSS TRKMFIDEVM ELVELSPLKD SLVGLPGVTG
1001: LSTEQRKRLT IAVELVANPS IIFMDEPTSG LDARAAAIVM RAIRNTVDTG RTVVCTIHQP SIDIFESFDE LFLMKRGGEE IYVGPLGRHS CELIRYFEAI
1101: EGVSKIKDSY NPSTWMLEVS SAVQEQITGI NFSQVYKNSA LHGMNKNLIK ELSTPPEGSN DLSFPTQYSQ TFRTQCFACL WKQSQSYWRN PPYTAVKYFY
1201: TVVMALLFGT MFWGIGRKRQ SQQDLFNAMG SMYASVLYMG VQNSATVQPV VAVERTVFYR ERAAHMYSPL PYALGQVAIE VPYIFVQSLI YGVIVYAMIG
1301: FEWTAVKLFW YLFFMFFTLS YYTFYGMMTV GLTPNYNIAS VVSSAFYTMW NLFSGFIIPR TRIPIWWRWY YWLCPVSWTL YGLVASQFGD VTEKLDNGML
1401: VSEFVGSYFG YHHDFLWAVG LVVASFAGLF AFLFGLSIKL FNWQRR
0101: ARFKERVDRV GVELPTIEVR YENLCVEAEA YVGSRGLPTI LHTYANVLEG MTNSLHITPN RKQKISVLHN VSGTIKPHRM TLLLGPPGAG KTTLLLALAG
0201: TLPSSLEMSG KITYNGHTME EFVPRRSAAY VSQNDLHIGE LTVRETVNFS AKCQGSGHRF DLLMELSRRE KELNIKPDPE IDVYLKAAAT GEQKAEVVTN
0301: HILKILGLDI CADTIVGNNM LRGISGGQKK RVTTAEMLVT PGRALFMDEI STGLDSSTTF QIVNSIRQTI HTLGGTAVIS LLQPAPETYE LFDDIILLSD
0401: GQVVYNGPRE HVLEFFESAG FKCPERKGVA DFLQEVTSRK DQRQYWIHSD ETYQYVPVKN FAEAFQSFHV GQAIRSELAV PFDKSRSHPA ALKTSKYGAS
0501: MKELLKANIS REMLLMRRNS FVYIFKATQL TLMAIITMTV FLRTNMHHDS ITNGGIYMGA LFFGIVMIMF NGLAEVGLTV AKLPVFFKQR DLLFFPAWTY
0601: SLPSWIIKTP LSLLNASIWV FITYYVIGFD PNVERLFRQF LLLLVMSETA SGLFRFIAGL ARNQIVANTI GSFFLLICML TGGFVLSREN VKKWWIWGYW
0701: ISPLMYAQNA ISVNEFLGDS WNKTISGFKE PLGRLVLESR GMFTEAKWYW IGVGALLGYV LLFNALYTIC LTFLKPFDSN QQTISEETMK IKQANLTGEI
0801: LEEASGRQSN TATLDTVDEN NGESTSNNTT VDSCPSKKGM VLPFTPLSLT FEDIRYSVDM PEEVKAQGVK EDRLELLKGI SGSFRPGVLT ALMGVSGAGK
0901: TTLMDVLAGR KTSGYVEGSI TISGYPKKQE TFARVSGYCE QNDIHSPNVT VYESLAFSAW LRLPADVDSS TRKMFIDEVM ELVELSPLKD SLVGLPGVTG
1001: LSTEQRKRLT IAVELVANPS IIFMDEPTSG LDARAAAIVM RAIRNTVDTG RTVVCTIHQP SIDIFESFDE LFLMKRGGEE IYVGPLGRHS CELIRYFEAI
1101: EGVSKIKDSY NPSTWMLEVS SAVQEQITGI NFSQVYKNSA LHGMNKNLIK ELSTPPEGSN DLSFPTQYSQ TFRTQCFACL WKQSQSYWRN PPYTAVKYFY
1201: TVVMALLFGT MFWGIGRKRQ SQQDLFNAMG SMYASVLYMG VQNSATVQPV VAVERTVFYR ERAAHMYSPL PYALGQVAIE VPYIFVQSLI YGVIVYAMIG
1301: FEWTAVKLFW YLFFMFFTLS YYTFYGMMTV GLTPNYNIAS VVSSAFYTMW NLFSGFIIPR TRIPIWWRWY YWLCPVSWTL YGLVASQFGD VTEKLDNGML
1401: VSEFVGSYFG YHHDFLWAVG LVVASFAGLF AFLFGLSIKL FNWQRR
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.