CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 3
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47506	Soybean	endoplasmic reticulum	71.03	75.32
KRH09797	Soybean	endoplasmic reticulum	71.03	75.26
KRH23522	Soybean	mitochondrion	70.24	74.47
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	69.91	74.38
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	55.82	73.97
VIT_09s0002g05560.t01	Wine grape	plasma membrane	69.25	72.01
KRH67471	Soybean	endoplasmic reticulum	67.39	70.52
KRH52503	Soybean	cytosol, peroxisome, plasma membrane	67.53	70.51
Solyc09g091660.2.1	Tomato	plastid	67.13	70.49
PGSC0003DMT400076208	Potato	plastid	67.13	70.49
GSMUA_Achr9P02950_001	Banana	plasma membrane	64.68	70.41
GSMUA_Achr6P34530_001	Banana	plasma membrane	61.31	70.28
KRH61824	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	67.06	69.98
Os01t0609300-01	Rice	plasma membrane	59.79	69.91
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	65.87	69.41
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	64.75	69.33
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	57.08	69.32
PGSC0003DMT400076209	Potato	plasma membrane	65.48	69.09
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	65.28	68.78
Solyc12g098210.1.1	Tomato	plastid	64.81	68.77
EES03260	Sorghum	plasma membrane	58.2	68.75
KRG95762	Soybean	mitochondrion	64.75	68.46
Os08t0384500-01	Rice	plasma membrane	34.26	67.89
Os01t0609900-02	Rice	plasma membrane	62.3	67.87
TraesCS3D01G234400.1	Wheat	plasma membrane	64.81	67.4
TraesCS3A01G217900.1	Wheat	cytosol	64.75	67.33
TraesCS3B01G248400.1	Wheat	cytosol, peroxisome, plasma membrane	64.75	67.33
Zm00001d011315_P002	Maize	plasma membrane	64.22	67.24
HORVU3Hr1G053350.8	Barley	vacuole	64.68	67.12
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	6.75	67.11
KRH47220	Soybean	plasma membrane	42.2	67.09
KRH16029	Soybean	cytosol	64.09	66.97
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	64.15	66.85
KRH05088	Soybean	endoplasmic reticulum	63.82	66.69
Os01t0609200-00	Rice	plasma membrane	64.35	66.46
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	64.29	66.44
KXG32865	Sorghum	plasma membrane	63.95	66.32
Zm00001d044443_P001	Maize	cytosol, mitochondrion, nucleus, plasma membrane	63.49	66.3
Zm00001d011319_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	63.95	66.1
EER98908	Sorghum	cytosol, nucleus, plasma membrane	63.82	66.05
GSMUA_Achr9P01490_001	Banana	plasma membrane	65.21	66.04
TraesCS3B01G248500.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	63.1	65.84
TraesCS3A01G218000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	63.1	65.84
TraesCS3D01G234300.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	62.9	65.63
HORVU7Hr1G092510.2	Barley	plasma membrane	62.5	65.58
Os01t0342750-01	Rice	plasma membrane	30.36	65.48
TraesCS2A01G483300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	62.63	65.36
TraesCS3A01G272800.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	62.24	65.35
TraesCS3B01G523700.1	Wheat	mitochondrion	46.23	65.33
TraesCS7B01G292700.1	Wheat	plasma membrane	61.71	65.24
HORVU3Hr1G071470.1	Barley	cytosol, mitochondrion, nucleus, plasma membrane	62.1	65.21
TraesCS7A01G391100.1	Wheat	plasma membrane	62.17	65.14
HORVU7Hr1G092380.8	Barley	cytosol	62.3	65.1
KXG32860	Sorghum	plasma membrane	62.96	65.07
TraesCS3D01G272200.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	61.97	65.07
TraesCS7D01G386600.1	Wheat	plasma membrane	62.17	65.05
TraesCSU01G097600.2	Wheat	plasma membrane	62.17	64.74
TraesCS7D01G386500.1	Wheat	plasma membrane	62.17	64.74
HORVU3Hr1G053380.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	63.03	64.61
Os01t0609000-00	Rice	plasma membrane	62.7	64.58
TraesCS7A01G391000.1	Wheat	plasma membrane	61.97	64.53
KRH67874	Soybean	mitochondrion	26.45	64.0
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	62.04	63.55
TraesCS2B01G149900.1	Wheat	cytosol, peroxisome, plasma membrane	52.12	63.45
TraesCS3B01G524400.1	Wheat	cytosol, peroxisome, plasma membrane	60.32	63.42
TraesCS3A01G479800.1	Wheat	cytosol, nucleus, plasma membrane	60.58	63.39
TraesCS3D01G474700.1	Wheat	cytosol, nucleus, plasma membrane	60.38	63.18
TraesCS5D01G190600.1	Wheat	cytosol, nucleus, plasma membrane	60.45	63.12
HORVU3Hr1G105140.4	Barley	cytosol, peroxisome, plasma membrane	60.32	63.07
TraesCS5B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	60.38	63.05
HORVU5Hr1G056280.6	Barley	cytosol, nucleus, plasma membrane	60.32	62.9
KXG20401	Sorghum	plasma membrane	60.19	62.76
EER98758	Sorghum	cytosol, nucleus, plasma membrane	60.12	62.73
TraesCS5A01G185500.1	Wheat	cytosol, nucleus, plasma membrane	57.61	62.39
Zm00001d044442_P036	Maize	plasma membrane	64.55	62.01
TraesCS2D01G130000.1	Wheat	cytosol, peroxisome, plasma membrane	58.2	61.5
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	64.95	60.96
Os09t0333000-00	Rice	plasma membrane	32.61	60.71
KRH67876	Soybean	plasma membrane	30.09	59.17
KRH34743	Soybean	plasma membrane	46.96	58.77
Os09t0332300-00	Rice	plasma membrane	32.08	58.72
KRH71633	Soybean	nucleus	56.55	57.77
TraesCS6D01G094800.1	Wheat	plasma membrane	35.12	57.34
TraesCS6A01G107100.1	Wheat	mitochondrion, plasma membrane	47.62	57.23
KRG92040	Soybean	extracellular	54.89	56.31
TraesCS2A01G127800.1	Wheat	cytosol, peroxisome, plasma membrane	29.3	56.29
KRH23404	Soybean	plasma membrane	54.76	55.68
Os01t0516900-00	Rice	plasma membrane	25.66	55.27
KRH17029	Soybean	cytosol, nucleus, plasma membrane	49.54	52.01
KRH02448	Soybean	plasma membrane	48.15	50.14

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A0R0G2G7	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2
InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	EMBL:ACUP02009109	ncoils:Coil	EnsemblPlantsGene:GLYMA_15G011800
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	InterPro:IPR003439	EnsemblPlants:KRH09795
ProteinID:KRH09795	ProteinID:KRH09795.1	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061
PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF444	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0006EDBFF5	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:+:903819..911563

Molecular Weight (calculated)

171001.0 Da

IEP (calculated)

7.157

GRAVY (calculated)

0.069

Length

1512 amino acids

Sequence
(BLAST)

0001: MQESSPVYSL NFSVESLYFT RSNFTYIFMH ATLLFHITSQ NCTSREKVCC SSIFLTLSLL TMENDSSLRV SSSIRRDASD IFSPSSFEED DEEALKWAAL
0101: DKLPTYNRLK KGLLITSNGE VNEIDVTDMG TQRRKEVLER LVRDAEEDNE KFLLKLRERI DRVGVSIPTI EARFEHLNVE AEAYVGSRAL PTFFNFIVNT
0201: VESYLNYLHI LSSKKKHVTI LKDVSGIVKP CRMTLLLGPP SSGKTTLLLA LAGKLDPDLK VSGRVTYNGH GMNEFVPQRT AAYISQDDVH IGEMTVRETL
0301: AFSARCQGVG SRYDMLSELS RREIVTDIKP DPNIDIYMKA IASEGQEANQ MMTEYVLKIL GLEMCADIVV GDEMLRGISG GQRKRVTTGE MLVGPTNALF
0401: MDEISSGLDS SSTVQIIKCL RQMVHILDGT AVISLLQPEP ETYELFDDII LLSDGQIVYQ GPREFVLEFF ESKGFRCPER KAVADFLQEV TSRKDQQQYW
0501: IHKDEPYSFV SVNEFAEAFR CFHVGRKLGD ELAVPFDKTK NHPAALTTKK YGVNKKELLK ANFSREYLLM KRNAFVYIFK LSQLALMAVV AMTVFLRTEM
0601: HKDSVDNGGV YTGALFFSIV MILFNGMADI SMTVAKLPIF YKQRDLLFYP AWAYAIPGWI LKIPITLAEV VVWVSITYYV IGFDPSVARF FKQYLLLLLL
0701: GQMASALFRT IAAIGRNMII ANTFGSFAIV TLLTLGGFIL SREDVKKWWI WGYWISPIMY EQNAMMVNEF LGQSWSHVLP NSTESLGVEV LKSRGFFTHA
0801: SWYWIGAGAL LGFVVLLNIT FTLALTYLNP PEMSRAVIFK ESHGNRNKDR TLDDIRLSLR LTGNAPSSNL EIGNLDDNGT ESMSSRSASV RPKAAVESSH
0901: RRKRGMVLPF EPHSLTFDGI TYSVDMPQEM KNQGVVEDRL VLLKGVSGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIEGSITISG YPKNQETYAQ
1001: ISGYCEQNDI HSPHVTIYES LLYSAWLRLS PEVNSETRKM FIEEVMELVE LNLLREALVG LPGVSGLSTE QRKRLTIAVE LVANPSIIFM DEPISGLDAR
1101: AAAIVMRTVR NIVDTGRTIV CTIHQPSIDI FEAFDELFLL KRGGREIYVG PLGRHSNHLV EYFERIEGVG KIKDGHNPAA WMLEITTPAR EMDLNVDFSD
1201: IYKNSVLCRR NKALVAELSK PAPGSKELHF PTQYAQPFFV QCKACLWKQH WSYWRNPPYT AVRFLFTTFV ALMFGTMFWD LGSKTRRKQD LFNAIGSMYN
1301: AILFLGIQNA LSVQPVVAIE RTVFYRERAA GMYSAIPYAL AQVVIELPYI FVQAVTYGII VYAMIGFEWT ASKFFWYLFF MYFTFLYFTF YGMMTVAVTP
1401: NQHIASIVAT AFYGIWNLFS GFVVPRPSIP VWWRWYYWAC PVAWSLYGLV ASQFGDITSA VELNETVKEF LRRYFGYRDD FVGVAACVVV GFAVLFATIF
1501: AFSLKVFNFE RR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.