Factsheet for TraesCS6A01G107100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

mitochondrion 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plasma membrane
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G094800.1	Wheat	plasma membrane	67.97	92.33
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	31.56	63.52
Solyc12g019640.1.1	Tomato	plasma membrane	30.29	62.66
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	7.47	61.84
Os01t0516900-00	Rice	plasma membrane	33.39	59.83
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	54.85	56.7
TraesCS3A01G217900.1	Wheat	cytosol	61.69	53.37
TraesCS2A01G483300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	60.57	52.59
TraesCS3A01G218000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	60.49	52.52
KRH47220	Soybean	plasma membrane	39.67	52.47
TraesCS3A01G272800.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	59.94	52.36
VIT_04s0008g04790.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	59.38	52.02
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	58.74	52.01
KRH61824	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	59.78	51.9
KRH52503	Soybean	cytosol, peroxisome, plasma membrane	59.62	51.8
TraesCS3A01G479800.1	Wheat	cytosol, nucleus, plasma membrane	58.74	51.14
Solyc08g067620.2.1	Tomato	nucleus	58.74	50.86
VIT_09s0002g05560.t01	Wine grape	plasma membrane	58.66	50.76
TraesCS7A01G391100.1	Wheat	plasma membrane	58.19	50.73
CDY39660	Canola	cytosol, nucleus, plasma membrane	56.92	50.6
KRH47506	Soybean	endoplasmic reticulum	57.23	50.49
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	56.68	50.46
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	56.68	50.46
KRH05088	Soybean	endoplasmic reticulum	57.79	50.24
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	57.23	50.17
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	56.28	50.14
KRH16029	Soybean	cytosol	57.63	50.1
KRH09797	Soybean	endoplasmic reticulum	56.76	50.03
TraesCS7A01G391000.1	Wheat	plasma membrane	57.63	49.93
KRH23522	Soybean	mitochondrion	56.52	49.86
KRH67471	Soybean	endoplasmic reticulum	57.23	49.83
AT1G15520.1	Thale cress	plastid	56.36	49.82
TraesCS6A01G178500.1	Wheat	plasma membrane	57.23	49.72
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	56.68	49.69
Solyc12g098210.1.1	Tomato	plastid	56.28	49.68
KRG95762	Soybean	mitochondrion	56.04	49.3
PGSC0003DMT400076209	Potato	plasma membrane	56.04	49.2
TraesCS5A01G447200.1	Wheat	plasma membrane	48.65	49.2
PGSC0003DMT400076208	Potato	plastid	56.28	49.17
Solyc09g091660.2.1	Tomato	plastid	56.04	48.96
TraesCS5A01G185500.1	Wheat	cytosol, nucleus, plasma membrane	54.05	48.71
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	48.01	48.51
TraesCS7A01G074500.3	Wheat	plasma membrane	47.69	47.77
KRH09795	Soybean	endoplasmic reticulum	57.23	47.62
TraesCS7A01G356200.1	Wheat	plasma membrane	44.91	47.36
TraesCS7A01G106600.1	Wheat	plasma membrane	29.09	47.23
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	58.9	46.9
TraesCS3A01G122500.2	Wheat	plasma membrane	50.95	44.79
TraesCS5A01G555900.1	Wheat	cytosol	26.95	44.66
TraesCS7A01G183900.1	Wheat	plasma membrane	48.89	44.57
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	55.48	43.33
TraesCS5A01G016200.1	Wheat	mitochondrion	49.36	43.28
TraesCS4A01G331100.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	49.21	42.87
TraesCS7A01G268800.2	Wheat	cytosol, nucleus, plasma membrane	45.63	42.52
TraesCS5A01G502800.1	Wheat	cytosol, nucleus, plasma membrane	44.28	41.35
TraesCS7A01G478500.1	Wheat	cytosol, peroxisome, plasma membrane	45.07	40.73
VIT_04s0008g04840.t01	Wine grape	plasma membrane	36.09	40.57
TraesCS2A01G127800.1	Wheat	cytosol, peroxisome, plasma membrane	24.88	39.77
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	26.31	39.55
TraesCS5A01G158100.1	Wheat	plasma membrane	45.55	39.38
TraesCS5A01G158300.1	Wheat	plasma membrane	45.47	39.26
TraesCS4A01G384800.1	Wheat	cytosol, nucleus, plasma membrane	41.1	36.88

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase
InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF443	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G107100
EnsemblPlants:TraesCS6A01G107100.1	TIGR:cd03232	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6A:+:75151412..75161019

Molecular Weight (calculated)

141509.0 Da

IEP (calculated)

8.091

GRAVY (calculated)

0.153

Length

1258 amino acids

Sequence
(BLAST)

0001: MTLLLGSPGS GKTTLLEALA GRLNKAMQVS GRVTYNGHGM EEFVAEKAAA YVSQEDLHTG EMTVRETLAF SAECQGTGDR QDLLAELARR EGEAGLTPEH
0101: DIDVFMKESA IGGKSNIVTN YIMQILGLHT CSDTLVGNDM ARGISGGQRK RVTIGEMLIG PARSLFMDEI SNGLDSSTAF QIVNFLGQLV HILGGTAVIS
0201: LLQPSPETYD LFDDVMLLSK GHVVYQGPKE NVIEFFESLG FRCPQRKAIA DFLLEVTSIK DQKHYWTRDG ETYQYITVEK FAEAFHAFHV GQIILKALEI
0301: PFEKNQSLSP SLTNSKYGVS KRQLVNAISA REILLMRRNS SLYMVNFAHM AMIAFIALTI FWKSNMHRDS LTDGGLYLGV LFFFVETMFS NLGDLGGTIM
0401: KLPLFFKERD VFYPAWAYTL PQWILKIPIT LVEITILVSM TYYAVGFDPN IGRFFKQYFL LLALSQMSSS LFRLIAGVTR NMFAANIFGT FTMLLLLLLG
0501: GFLLSSENFN KFWMLGYWIS PLMYAQTTIS TNEFTSHRWS KALPGSTDPL GTSVLKSRGI FVEAKWYWIG LGVLIGYTLI FNGLYTAAFT YFKKILKEDG
0601: LFLFVAHGRG FSSLTNKALE KKFAKLSRDA PSKRSHQKRV MNELESPRNN GRVSLPFVPL SLTFDNIRYS VDIPKENKAR GETKDRLEIL KGVSGCFRPG
0701: VLTALMGTSG AGKTTLMDVL AGRITGGYRE GTITISGYQK KQETFCRIFG YCEQSDIQSP HLTVLESLLF SAWLRLPSEI DSLTRRIFVE DMLELLDLTS
0801: LGGAQVGHPG GYGLSCEQRK RLTIAVELVA NPSIIFMDEP TSGLDARAAA IVMRTVRNLM DTGKTVACTI HQPSIDIFET FDELFLLNQG GEEIYVGPLG
0901: EKSLNMITYF EGIGVNRIQE GYNPTTWMLE VTSTVQEQML GINLSVIFKQ SELYQKNKAL IKELSMPPPS STDLHFSNKY SQSLVKQCLI CLWKQNLSYW
1001: RNIHYTGSRY CITIIIALLF GTVFWDLGMN RARRQDLFNS MGSMYAAILM IGISNASGVQ PVIAMERIVF YKERASRMYS SLPYTFAQVV IELPYIFIQT
1101: LIYGVLVYAM IGFEWTATKF FWYLFFMYFT FLYFTFIGMM AAGLSPSGGI AAIISSASYG LWNLFSGFLI PVYRIPIWWS WYYWICPVAW TVYGLVASQF
1201: GDVEEKLETG ETVVEFLRSY YGFRHEFLGV IAAVTMGCTV AFALLFGFSI KYINFQRR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.