Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G114300.2 | Wheat | cytosol, peroxisome, plasma membrane | 92.09 | 52.24 |
| OQU80771 | Sorghum | plasma membrane | 76.55 | 49.49 |
| HORVU3Hr1G116680.1 | Barley | mitochondrion, plasma membrane | 80.76 | 48.46 |
| TraesCS5B01G517700.1 | Wheat | plasma membrane | 61.0 | 47.98 |
| TraesCS7A01G268800.2 | Wheat | cytosol, nucleus, plasma membrane | 78.52 | 44.15 |
| Zm00001d052726_P008 | Maize | cytosol, nucleus, plasma membrane | 76.15 | 42.22 |
| TraesCS5A01G502800.1 | Wheat | cytosol, nucleus, plasma membrane | 74.7 | 42.09 |
| Zm00001d031724_P003 | Maize | plasma membrane | 76.81 | 41.76 |
| Os01t0724500-01 | Rice | plasma membrane | 10.41 | 38.54 |
| GSMUA_Achr1P08030_001 | Banana | plasma membrane | 57.05 | 33.33 |
| GSMUA_Achr1P08050_001 | Banana | cytosol, peroxisome, plasma membrane | 56.65 | 33.08 |
| TraesCS7A01G106600.1 | Wheat | plasma membrane | 32.94 | 32.26 |
| TraesCS5A01G447200.1 | Wheat | plasma membrane | 51.65 | 31.51 |
| TraesCS7A01G356200.1 | Wheat | plasma membrane | 46.51 | 29.59 |
| TraesCS7A01G183900.1 | Wheat | plasma membrane | 51.38 | 28.26 |
| TraesCS7A01G074500.3 | Wheat | plasma membrane | 45.45 | 27.47 |
| TraesCS5A01G016200.1 | Wheat | mitochondrion | 51.78 | 27.39 |
| TraesCS5A01G185500.1 | Wheat | cytosol, nucleus, plasma membrane | 50.2 | 27.29 |
| TraesCS6A01G178500.1 | Wheat | plasma membrane | 52.04 | 27.28 |
| TraesCS4A01G331100.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 51.65 | 27.15 |
| TraesCS3A01G122500.2 | Wheat | plasma membrane | 50.99 | 27.04 |
| TraesCS3A01G218000.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 51.52 | 26.98 |
| TraesCS6A01G107100.1 | Wheat | mitochondrion, plasma membrane | 44.66 | 26.95 |
| TraesCS2A01G483300.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 51.38 | 26.92 |
| TraesCS7A01G391100.1 | Wheat | plasma membrane | 50.59 | 26.61 |
| TraesCS3A01G272800.2 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 50.33 | 26.53 |
| TraesCS7A01G391000.1 | Wheat | plasma membrane | 50.33 | 26.31 |
| TraesCS2A01G127800.1 | Wheat | cytosol, peroxisome, plasma membrane | 27.27 | 26.3 |
| TraesCS3A01G217900.1 | Wheat | cytosol | 50.33 | 26.27 |
| TraesCS3A01G479800.1 | Wheat | cytosol, nucleus, plasma membrane | 49.93 | 26.23 |
| TraesCS7A01G478500.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.77 | 25.5 |
| TraesCS5A01G158300.1 | Wheat | plasma membrane | 47.69 | 24.85 |
| TraesCS5A01G158100.1 | Wheat | plasma membrane | 46.77 | 24.4 |
| TraesCS4A01G384800.1 | Wheat | cytosol, nucleus, plasma membrane | 43.87 | 23.75 |
| Os08t0544400-01 | Rice | plasma membrane | 8.43 | 13.47 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:ABC_2_trans | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 |
| GO:GO:0016887 | InterPro:IPR003439 | InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 |
| PFAM:PF08370 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF214 | SUPFAM:SSF52540 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5A01G555900 |
| EnsemblPlants:TraesCS5A01G555900.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:707056299..707066004
Molecular Weight (calculated)
85674.2 Da
IEP (calculated)
8.791
GRAVY (calculated)
0.126
Length
759 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIIEIIGEA ARGKKDVVNE VDKNLDSFFK ATTFGEGRNL TRNYIIKILG LSECTDTLVG DEMRRGISGG QKKRLTIGEM LVGLAKCFFM DDISTGLDSS
101: TTYEIIKVIQ QMAHLLDLTV VISLLQPPPE TLELFDDIVL LCEGQIVYLG PRENATDFFE IMGFKCPYRK NIADFLQEVT SKMDQKQYWI GDQHRYHYHS
201: IENFAESFRS SYLPRLVQDK LLVPNSSRVK SAEVKTRLGM SRWNIFKACF SREVLLLKRN SPIHIFTTVQ ITILALVIST IFLRTNMNHK SVLDANKYVG
301: ALFIAVMLVN FNGMIEIAMT IKRLPTFYKQ RELLALPGWA LLTPNFLLSI PISLMQTGLW TSLTYYMISY APSFIRFMKH FLVLFSMHQT SMGMCRLLVA
401: MARTLVMANV LATTTLIAIF IFGGIVISKD DLKQWLQWGY WTSPFTYAQN AISLNEFLGE RWATEFHYEN ANTIGEAILK IRGFLTESHW YWICVGILFG
501: FALVFNVLSI FALEFLNSPH KRNVHTDATD TMMECENKIV ETQDASILQG VLPFQPLPFA FNAINYSVNM PKEMMKYGVT EKKLQLLQDV SGAFRPGVLT
601: APMGITGAGK TTLLDVLAGR KTGGYIEGTI TVAGYPKRQE TFSRISGYCE QSDIHSPNLT VYESLQFSAR LRLSSKVTSH QRYMFIHEVM HLVELTRLKN
701: AMVGLVGATG LSAEQRKRLM AVEMVASPSI IFMDEPTTGL DAGSAAIVMR AIRKTVDTG
101: TTYEIIKVIQ QMAHLLDLTV VISLLQPPPE TLELFDDIVL LCEGQIVYLG PRENATDFFE IMGFKCPYRK NIADFLQEVT SKMDQKQYWI GDQHRYHYHS
201: IENFAESFRS SYLPRLVQDK LLVPNSSRVK SAEVKTRLGM SRWNIFKACF SREVLLLKRN SPIHIFTTVQ ITILALVIST IFLRTNMNHK SVLDANKYVG
301: ALFIAVMLVN FNGMIEIAMT IKRLPTFYKQ RELLALPGWA LLTPNFLLSI PISLMQTGLW TSLTYYMISY APSFIRFMKH FLVLFSMHQT SMGMCRLLVA
401: MARTLVMANV LATTTLIAIF IFGGIVISKD DLKQWLQWGY WTSPFTYAQN AISLNEFLGE RWATEFHYEN ANTIGEAILK IRGFLTESHW YWICVGILFG
501: FALVFNVLSI FALEFLNSPH KRNVHTDATD TMMECENKIV ETQDASILQG VLPFQPLPFA FNAINYSVNM PKEMMKYGVT EKKLQLLQDV SGAFRPGVLT
601: APMGITGAGK TTLLDVLAGR KTGGYIEGTI TVAGYPKRQE TFSRISGYCE QSDIHSPNLT VYESLQFSAR LRLSSKVTSH QRYMFIHEVM HLVELTRLKN
701: AMVGLVGATG LSAEQRKRLM AVEMVASPSI IFMDEPTTGL DAGSAAIVMR AIRKTVDTG
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.