Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G167100.1 | Wheat | cytosol, nucleus, plasma membrane | 99.33 | 99.33 |
| TraesCS7D01G269400.1 | Wheat | cytosol, nucleus, plasma membrane | 99.19 | 99.19 |
| HORVU7Hr1G056530.12 | Barley | cytosol, nucleus | 97.11 | 97.18 |
| Os08t0544400-01 | Rice | plasma membrane | 31.41 | 89.26 |
| TraesCS5A01G502800.1 | Wheat | cytosol, nucleus, plasma membrane | 86.37 | 86.56 |
| OQU80771 | Sorghum | plasma membrane | 74.74 | 85.95 |
| Zm00001d052726_P008 | Maize | cytosol, nucleus, plasma membrane | 84.44 | 83.27 |
| Zm00001d031724_P003 | Maize | plasma membrane | 85.41 | 82.59 |
| TraesCS5A01G555900.1 | Wheat | cytosol | 44.15 | 78.52 |
| TraesCS7A01G106600.1 | Wheat | plasma membrane | 40.96 | 71.35 |
| GSMUA_Achr1P08050_001 | Banana | cytosol, peroxisome, plasma membrane | 59.26 | 61.54 |
| GSMUA_Achr1P08030_001 | Banana | plasma membrane | 55.85 | 58.04 |
| TraesCS5A01G447200.1 | Wheat | plasma membrane | 48.3 | 52.41 |
| TraesCS7A01G183900.1 | Wheat | plasma membrane | 50.07 | 48.99 |
| TraesCS5A01G016200.1 | Wheat | mitochondrion | 51.63 | 48.57 |
| TraesCS4A01G331100.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 51.33 | 47.99 |
| TraesCS3A01G218000.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 51.41 | 47.9 |
| TraesCS3A01G479800.1 | Wheat | cytosol, nucleus, plasma membrane | 51.26 | 47.89 |
| TraesCS2A01G483300.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 51.26 | 47.76 |
| TraesCS3A01G272800.2 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 50.89 | 47.71 |
| TraesCS7A01G391100.1 | Wheat | plasma membrane | 50.37 | 47.12 |
| TraesCS3A01G122500.2 | Wheat | plasma membrane | 49.85 | 47.03 |
| TraesCS6A01G178500.1 | Wheat | plasma membrane | 50.22 | 46.82 |
| TraesCS7A01G356200.1 | Wheat | plasma membrane | 41.33 | 46.77 |
| TraesCS7A01G074500.3 | Wheat | plasma membrane | 43.48 | 46.74 |
| TraesCS5A01G185500.1 | Wheat | cytosol, nucleus, plasma membrane | 48.3 | 46.7 |
| TraesCS3A01G217900.1 | Wheat | cytosol | 50.15 | 46.56 |
| TraesCS7A01G391000.1 | Wheat | plasma membrane | 50.07 | 46.56 |
| TraesCS6A01G107100.1 | Wheat | mitochondrion, plasma membrane | 42.52 | 45.63 |
| TraesCS7A01G478500.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.07 | 44.68 |
| TraesCS5A01G158300.1 | Wheat | plasma membrane | 47.56 | 44.06 |
| TraesCS5A01G158100.1 | Wheat | plasma membrane | 47.41 | 43.99 |
| TraesCS4A01G384800.1 | Wheat | cytosol, nucleus, plasma membrane | 42.89 | 41.3 |
| TraesCS2A01G127800.1 | Wheat | cytosol, peroxisome, plasma membrane | 23.04 | 39.52 |
| Os01t0724500-01 | Rice | plasma membrane | 5.7 | 37.56 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans | InterPro:ABC_trans_N |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 |
| ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF214 | SMART:SM00382 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7A01G268800 | EnsemblPlants:TraesCS7A01G268800.2 | TIGR:cd03232 | SEG:seg | : |
Description
No Description!
Coordinates
chr7A:+:272942873..272953462
Molecular Weight (calculated)
152655.0 Da
IEP (calculated)
8.883
GRAVY (calculated)
0.105
Length
1350 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEQSWEAEQA PPASGVSARP PPPLTHEDNR GFLQMLREKK ERLGVDAAKV EVRFEELTVE ADVRVGRRAL PTLLNCAVNA AQELATSSHM CTTRKKPIKI
0101: INGASGTIRP SRMTLLLGAP GSGKTTFLKA LAGKLDSSLK LKGKVMYNGE EVNSSTPQYL HAYISQYDLH HAEMTVRETI DFSSKMLGTN NEFEMLGEAI
0201: RRKKGVINKV DQDLDSFIKA TTFGEGSNLT TNYIIKILGL SECADTLVGD EMRRGISGGQ KKRATIGEML VGLARCFFMD DISTGLDSST TYEIVKFLQQ
0301: MAHLMDLTVV ISLLQPPPET LELFDDIILL CEGQIVYHGP RENATGFFEI MGFKCPSRKN VADFLQEVTS KMDQKQYWIG DENKYQYRSI EKFAESFRSS
0401: YLPQPAKDDL CKTNNTGKRK EIITSATRRI SRWNIFKACF SREVLLLKRN SPLHIFKTVQ ITVMALVIST VFLRTNMNHK TVLDANKYMG SLFMAVVIVN
0501: FNGMTEIGMT IKRLPTFYKQ RELLALPGWA LLSSVFLISL PMSLLETGLW TSLTYYVIGY APSFLRFIQQ FLVLFAMHQM SMGLYRFLAA IGRTQVMANM
0601: LGTAALIAIY IFGGFVISKD NLQPWLQWGY WTSPFTYAQN AVALNEFLDE RWAIEFYYAN AKTVGEAILK IRGLLTEWHW YWICVGILFG FSLVLNILTI
0701: FALEFMNSPH KHQVNIDSTK TKTECKKQKV GTRNASTGQV ALPFQPLSLV FDHINYFVDM PKEMIKYGVT EKKLQLLQDV SGVFRPGVLT ALMGITGAGK
0801: TTLLDILAGR KTGGYIEGTI RIAGYPKKQD TFSRISGYCE QSDIHSPNLT VHESLQFSAW LRLPSNVNSR QRDMFIDEVM DLVELTGLKN AMVGIAGATG
0901: LSAEQRKRLT IAVELVASPS IIFMDEPTTG LDARAAAIVM RTVRKTVDTG RTVVCTIHQP SIGIFESFDE LLLMKRGGQI IYSGSLGPLS SNMIKYFEAI
1001: PGVPRIKEGQ NPAAWVLDIS SHITEYVTGV DYAEIYRSSS LYRENMLLIE ELGQPAPNTV DLHFPPGYWQ NFRAQCMACL WKQRCAYWKN SEHNVVRFLN
1101: TFAVSIMFGI VFWKIGSTIK REQDVFNILG VVYGSALFLG FMNCSILQPV VAMERVVLYR EKAAGMYCTL AYAIAQMAIE LPYMLVQVLI FASIVYPMIG
1201: FEMTAVKFFW FVLYMVLSFM YYTLYGMMTV ALTPNLEIAA GLSFLIFIFW NVFSGFIIGR ELIPIWWRWV YWANPAAWTV YGLMFSQLGD RTELIRVPGQ
1301: PDQTVREFLE GYLGLENRYF NLVTCLHLAI IALFAFLFFI FIKHLKFQRR
0101: INGASGTIRP SRMTLLLGAP GSGKTTFLKA LAGKLDSSLK LKGKVMYNGE EVNSSTPQYL HAYISQYDLH HAEMTVRETI DFSSKMLGTN NEFEMLGEAI
0201: RRKKGVINKV DQDLDSFIKA TTFGEGSNLT TNYIIKILGL SECADTLVGD EMRRGISGGQ KKRATIGEML VGLARCFFMD DISTGLDSST TYEIVKFLQQ
0301: MAHLMDLTVV ISLLQPPPET LELFDDIILL CEGQIVYHGP RENATGFFEI MGFKCPSRKN VADFLQEVTS KMDQKQYWIG DENKYQYRSI EKFAESFRSS
0401: YLPQPAKDDL CKTNNTGKRK EIITSATRRI SRWNIFKACF SREVLLLKRN SPLHIFKTVQ ITVMALVIST VFLRTNMNHK TVLDANKYMG SLFMAVVIVN
0501: FNGMTEIGMT IKRLPTFYKQ RELLALPGWA LLSSVFLISL PMSLLETGLW TSLTYYVIGY APSFLRFIQQ FLVLFAMHQM SMGLYRFLAA IGRTQVMANM
0601: LGTAALIAIY IFGGFVISKD NLQPWLQWGY WTSPFTYAQN AVALNEFLDE RWAIEFYYAN AKTVGEAILK IRGLLTEWHW YWICVGILFG FSLVLNILTI
0701: FALEFMNSPH KHQVNIDSTK TKTECKKQKV GTRNASTGQV ALPFQPLSLV FDHINYFVDM PKEMIKYGVT EKKLQLLQDV SGVFRPGVLT ALMGITGAGK
0801: TTLLDILAGR KTGGYIEGTI RIAGYPKKQD TFSRISGYCE QSDIHSPNLT VHESLQFSAW LRLPSNVNSR QRDMFIDEVM DLVELTGLKN AMVGIAGATG
0901: LSAEQRKRLT IAVELVASPS IIFMDEPTTG LDARAAAIVM RTVRKTVDTG RTVVCTIHQP SIGIFESFDE LLLMKRGGQI IYSGSLGPLS SNMIKYFEAI
1001: PGVPRIKEGQ NPAAWVLDIS SHITEYVTGV DYAEIYRSSS LYRENMLLIE ELGQPAPNTV DLHFPPGYWQ NFRAQCMACL WKQRCAYWKN SEHNVVRFLN
1101: TFAVSIMFGI VFWKIGSTIK REQDVFNILG VVYGSALFLG FMNCSILQPV VAMERVVLYR EKAAGMYCTL AYAIAQMAIE LPYMLVQVLI FASIVYPMIG
1201: FEMTAVKFFW FVLYMVLSFM YYTLYGMMTV ALTPNLEIAA GLSFLIFIFW NVFSGFIIGR ELIPIWWRWV YWANPAAWTV YGLMFSQLGD RTELIRVPGQ
1301: PDQTVREFLE GYLGLENRYF NLVTCLHLAI IALFAFLFFI FIKHLKFQRR
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.