Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0512700-01 | Rice | cytosol, peroxisome | 46.93 | 86.01 |
| OQU91497 | Sorghum | cytosol, nucleus, plasma membrane | 74.18 | 75.31 |
| CDY18456 | Canola | cytosol, nucleus, plasma membrane | 55.49 | 55.33 |
| CDY63361 | Canola | plasma membrane | 15.69 | 55.28 |
| PGSC0003DMT400046986 | Potato | plasma membrane | 34.81 | 54.83 |
| CDY55440 | Canola | cytosol, nucleus, plasma membrane | 37.45 | 54.74 |
| CDX74974 | Canola | cytosol | 54.99 | 54.56 |
| VIT_14s0060g00470.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 56.35 | 54.56 |
| Bra005208.1-P | Field mustard | cytosol, nucleus, plasma membrane | 54.71 | 54.2 |
| CDX91350 | Canola | cytosol, peroxisome, plasma membrane | 54.49 | 54.07 |
| Solyc01g101070.2.1 | Tomato | plastid | 55.28 | 53.56 |
| TraesCS7A01G478500.1 | Wheat | cytosol, peroxisome, plasma membrane | 53.07 | 53.45 |
| KRH02448 | Soybean | plasma membrane | 55.28 | 53.37 |
| CDY52757 | Canola | cytosol, peroxisome, plasma membrane | 54.71 | 53.23 |
| CDY07588 | Canola | cytosol, peroxisome, plasma membrane | 54.64 | 53.16 |
| TraesCS5A01G158300.1 | Wheat | plasma membrane | 55.06 | 52.99 |
| TraesCS5A01G158100.1 | Wheat | plasma membrane | 54.92 | 52.92 |
| AT4G15233.1 | Thale cress | cytosol, peroxisome, plasma membrane | 52.5 | 52.87 |
| Bra012797.1-P | Field mustard | cytosol | 51.36 | 52.52 |
| Bra017198.1-P | Field mustard | mitochondrion | 55.06 | 52.45 |
| AT3G53480.1 | Thale cress | cytosol, peroxisome, plasma membrane | 54.07 | 52.28 |
| CDY65557 | Canola | plasma membrane | 13.91 | 52.14 |
| CDX91351 | Canola | cytosol | 45.93 | 52.1 |
| Bra003137.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 54.71 | 51.96 |
| CDY06512 | Canola | cytosol, peroxisome, plasma membrane | 50.78 | 51.78 |
| CDX74973 | Canola | cytosol | 50.93 | 51.15 |
| CDY58247 | Canola | cytosol | 32.81 | 50.33 |
| CDY65558 | Canola | cytosol | 32.1 | 48.03 |
| TraesCS5A01G447200.1 | Wheat | plasma membrane | 40.8 | 45.98 |
| TraesCS6A01G178500.1 | Wheat | plasma membrane | 47.0 | 45.51 |
| TraesCS3A01G272800.2 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 46.72 | 45.49 |
| TraesCS7A01G356200.1 | Wheat | plasma membrane | 38.66 | 45.43 |
| TraesCS7A01G183900.1 | Wheat | plasma membrane | 44.58 | 45.29 |
| TraesCS3A01G217900.1 | Wheat | cytosol | 46.86 | 45.19 |
| TraesCS3A01G218000.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 46.51 | 45.0 |
| TraesCS2A01G483300.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 46.29 | 44.79 |
| TraesCS7A01G391100.1 | Wheat | plasma membrane | 46.01 | 44.7 |
| TraesCS7A01G391000.1 | Wheat | plasma membrane | 46.08 | 44.49 |
| TraesCS3A01G479800.1 | Wheat | cytosol, nucleus, plasma membrane | 45.65 | 44.29 |
| TraesCS5A01G016200.1 | Wheat | mitochondrion | 45.29 | 44.25 |
| TraesCS4A01G331100.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 45.44 | 44.11 |
| TraesCS3A01G122500.2 | Wheat | plasma membrane | 44.94 | 44.03 |
| TraesCS5A01G555900.1 | Wheat | cytosol | 23.75 | 43.87 |
| TraesCS7A01G074500.3 | Wheat | plasma membrane | 39.23 | 43.79 |
| TraesCS5A01G185500.1 | Wheat | cytosol, nucleus, plasma membrane | 42.87 | 43.05 |
| TraesCS7A01G268800.2 | Wheat | cytosol, nucleus, plasma membrane | 41.3 | 42.89 |
| TraesCS5A01G502800.1 | Wheat | cytosol, nucleus, plasma membrane | 40.66 | 42.32 |
| TraesCS7A01G106600.1 | Wheat | plasma membrane | 23.18 | 41.94 |
| TraesCS6A01G107100.1 | Wheat | mitochondrion, plasma membrane | 36.88 | 41.1 |
| TraesCS2A01G127800.1 | Wheat | cytosol, peroxisome, plasma membrane | 21.97 | 39.14 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans |
| InterPro:ABC_trans_N | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 |
| PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF344 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS4A01G384800 | EnsemblPlants:TraesCS4A01G384800.1 | TIGR:cd03232 | TIGR:cd03233 | SEG:seg | : |
Description
No Description!
Coordinates
chr4A:+:662278609..662291897
Molecular Weight (calculated)
159925.0 Da
IEP (calculated)
7.748
GRAVY (calculated)
-0.038
Length
1402 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEGLARETNP SSHHQDFASC ASDERPDEPE LELASRRRQN GAGNNEHVSE NMLLDSSKFG ALKRREFFNN LLKNLEDDHP RFLRRQKERI DRVDVKLPAI
0101: EVRYNNLFVE AECRVTKGNH LPSLWNSTKG AFSGLVKLLG FETERAKTNV LEDVSGIIKP CRLTLLLGPP GCGKSTLLRA LAGKLDKSLK VTGDISYNCY
0201: ELHEFVPEKT AVYINQHDLH IAEMTVRETL DFSAQCQGVG RRPKILKEVN TRESVAGIIP DADIDLYMKV VAVEASERSL QTDYILKIMG LETCADTMVG
0301: DAMRRGISGG QKKRLTTAEM IVGPAKAYFM DEISNGLDSS TTFQIINCFQ QLTNISEYTM VISLLQPTPE VFDLFDDLIL MAEGKIIYHG PRNEALNFFE
0401: ECGFKCPERK AAADFLQEIL SRKDQEQYWL GPHESYRYIS PHELSSMFKE NHRGRKLHEQ SVPPKSQFGK EALAFNKYSL RKLEMFKACG AREALLMKRN
0501: MFVYVFKTGQ LAIIALVTMS VFLRTRMTIS FTHANYYMGA LFFSIFMIML NGIPEMSMQI GRLPSFYKQK SYYFYSSWAY AIPASVLKVP VSILDSLVWI
0601: SITYYGIGYT PTVSRFFCQF LILCLLHHSV TSQYRFIASY FQTPIVSFFY LFLALTVFLT FGGFILPKTS MPEWLNWGFW ISPMAYAEIS IVINEFLAPR
0701: WQKESIQNIT IGNQILVNHG LYYSWHFYWI SFGALLGSIL LFYIAFGLAL DYRTPTEEYH GSRPTKSLCQ QQEKDSTIQN ESDDQSNISK AKMTIPTMHL
0801: PITFHNLNYY IDTPPEMLKQ GYPTRRLRLL NNITGALRPG VLSALMGVSG AGKTTLLDVL AGRKTGGYIE GDIRIGGYPK VQETFVRILG YCEQVDIHSP
0901: QLTVEESVTY SAWLRLPSHV DKQTRSKFVA EVLETVELDQ IKDVLVGSPQ KNGLSMEQRK RLTIAVELVS NPSIILMDEP TTGLDTRSAA IVIRAVKNIC
1001: ETGRTVVCTI HQPSTEIFEA FDELILMKTG GKTIYNGPIG ERSCKVIEYF EKISGVPKIK SNCNPATWMM DVTSTSMEVQ HNMDFAILYE ESSLHREAED
1101: LVEQLSIPLP NSENLRFSHS FAQNGWIQLK ACLWKQNITY WRSPQYNLRR IMMTVISALI YGVLFWKHAK VLNNEQDMLS VFGAMYLGFT TIGAYNDQTI
1201: IPFSTTERIV MYREKFAGMY SSWSYSFAQA FIEIPYVFIQ VVLYTLIVYP STGYYWTAHK FLWFFYTTFC SILSYVYVGL LLVSITPNVQ VATILASFFN
1301: TMQTLFSGFI LPAPQIPKWW TWLYYLTPTS WALNALLTSQ YGNIEKEVKA FGETKSVSIF LNDYFGFHQD KLSIVATVLV AFPFVLIILF SLSIEKLNFQ
1401: KR
0101: EVRYNNLFVE AECRVTKGNH LPSLWNSTKG AFSGLVKLLG FETERAKTNV LEDVSGIIKP CRLTLLLGPP GCGKSTLLRA LAGKLDKSLK VTGDISYNCY
0201: ELHEFVPEKT AVYINQHDLH IAEMTVRETL DFSAQCQGVG RRPKILKEVN TRESVAGIIP DADIDLYMKV VAVEASERSL QTDYILKIMG LETCADTMVG
0301: DAMRRGISGG QKKRLTTAEM IVGPAKAYFM DEISNGLDSS TTFQIINCFQ QLTNISEYTM VISLLQPTPE VFDLFDDLIL MAEGKIIYHG PRNEALNFFE
0401: ECGFKCPERK AAADFLQEIL SRKDQEQYWL GPHESYRYIS PHELSSMFKE NHRGRKLHEQ SVPPKSQFGK EALAFNKYSL RKLEMFKACG AREALLMKRN
0501: MFVYVFKTGQ LAIIALVTMS VFLRTRMTIS FTHANYYMGA LFFSIFMIML NGIPEMSMQI GRLPSFYKQK SYYFYSSWAY AIPASVLKVP VSILDSLVWI
0601: SITYYGIGYT PTVSRFFCQF LILCLLHHSV TSQYRFIASY FQTPIVSFFY LFLALTVFLT FGGFILPKTS MPEWLNWGFW ISPMAYAEIS IVINEFLAPR
0701: WQKESIQNIT IGNQILVNHG LYYSWHFYWI SFGALLGSIL LFYIAFGLAL DYRTPTEEYH GSRPTKSLCQ QQEKDSTIQN ESDDQSNISK AKMTIPTMHL
0801: PITFHNLNYY IDTPPEMLKQ GYPTRRLRLL NNITGALRPG VLSALMGVSG AGKTTLLDVL AGRKTGGYIE GDIRIGGYPK VQETFVRILG YCEQVDIHSP
0901: QLTVEESVTY SAWLRLPSHV DKQTRSKFVA EVLETVELDQ IKDVLVGSPQ KNGLSMEQRK RLTIAVELVS NPSIILMDEP TTGLDTRSAA IVIRAVKNIC
1001: ETGRTVVCTI HQPSTEIFEA FDELILMKTG GKTIYNGPIG ERSCKVIEYF EKISGVPKIK SNCNPATWMM DVTSTSMEVQ HNMDFAILYE ESSLHREAED
1101: LVEQLSIPLP NSENLRFSHS FAQNGWIQLK ACLWKQNITY WRSPQYNLRR IMMTVISALI YGVLFWKHAK VLNNEQDMLS VFGAMYLGFT TIGAYNDQTI
1201: IPFSTTERIV MYREKFAGMY SSWSYSFAQA FIEIPYVFIQ VVLYTLIVYP STGYYWTAHK FLWFFYTTFC SILSYVYVGL LLVSITPNVQ VATILASFFN
1301: TMQTLFSGFI LPAPQIPKWW TWLYYLTPTS WALNALLTSQ YGNIEKEVKA FGETKSVSIF LNDYFGFHQD KLSIVATVLV AFPFVLIILF SLSIEKLNFQ
1401: KR
0001: MGSSFRSSSS RNEHEDGGDE AEHALQWAEI QRLPTFKRLR SSLVDKYGEG TEKGKKVVDV TKLGAMERHL MIEKLIKHIE NDNLKLLKKI RRRMERVGVE
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKCYGEIS
0201: YNGHGLNEVV PQKTSAYISQ HDLHIAEMTT RETIDFSARC QGVGSRTDIM MEVSKREKDG GIIPDPEIDA YMKAISVKGL KRSLQTDYIL KILGLDICAE
0301: TLVGNAMKRG ISGGQKKRLT TAEMIVGPTK ALFMDEITNG LDSSTAFQII KSLQQVAHIT NATVFVSLLQ PAPESYDLFD DIVLMAEGKI VYHGPRDDVL
0401: KFFEECGFQC PERKGVADFL QEVISKKDQG QYWLHQNLPH SFVSVDTLSK RFKDLEIGRK IEEALSKPYD ISKTHKDALS FNVYSLPKWE LFRACISREF
0501: LLMKRNYFVY LFKTFQLVLA AIITMTVFIR TRMDIDIIHG NSYMSCLFFA TVVLLVDGIP ELSMTVQRLS VFYKQKQLCF YPAWAYAIPA TVLKIPLSFF
0601: ESLVWTCLTY YVIGYTPEPY RFFRQFMILF AVHFTSISMF RCIAAIFQTG VAAMTAGSFV MLITFVFAGF AIPYTDMPGW LKWGFWVNPI SYAEIGLSVN
0701: EFLAPRWQKM QPTNVTLGRT ILESRGLNYD DYMYWVSLSA LLGLTIIFNT IFTLALSFLK SPTSSRPMIS QDKLSELQGT KDSSVKKNKP LDSSIKTNED
0801: PGKMILPFKP LTITFQDLNY YVDVPVEMKG QGYNEKKLQL LSEITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGEIRISGFL KVQETFARVS
0901: GYCEQTDIHS PSITVEESLI YSAWLRLVPE INPQTKIRFV KQVLETIELE EIKDALVGVA GVSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIHIFE AFDELVLLKR GGRMIYSGPL GQHSSCVIEY FQNIPGVAKI RDKYNPATWM LEVTSESVET ELDMDFAKIY
1101: NESDLYKNNS ELVKELSKPD HGSSDLHFKR TFAQNWWEQF KSCLWKMSLS YWRSPSYNLM RIGHTFISSF IFGLLFWNQG KKIDTQQNLF TVLGAIYGLV
1201: LFVGINNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEIPYIFI QSAEFVIVIY PMIGFYASFS KVFWSLYAMF CNLLCFNYLA MFLISITPNF
1301: MVAAILQSLF FTTFNIFAGF LIPKPQIPKW WVWFYYITPT SWTLNLFFSS QYGDIHQKIN AFGETKTVAS FLEDYFGFHH DRLMITAIIL IAFPIALATM
1401: YAFFVAKLNF QKR
0101: FPSIEVRYEH LGVEAACEVV EGKALPTLWN SLKHVFLDLL KLSGVRTNEA NIKILTDVSG IISPGRLTLL LGPPGCGKTT LLKALSGNLE NNLKCYGEIS
0201: YNGHGLNEVV PQKTSAYISQ HDLHIAEMTT RETIDFSARC QGVGSRTDIM MEVSKREKDG GIIPDPEIDA YMKAISVKGL KRSLQTDYIL KILGLDICAE
0301: TLVGNAMKRG ISGGQKKRLT TAEMIVGPTK ALFMDEITNG LDSSTAFQII KSLQQVAHIT NATVFVSLLQ PAPESYDLFD DIVLMAEGKI VYHGPRDDVL
0401: KFFEECGFQC PERKGVADFL QEVISKKDQG QYWLHQNLPH SFVSVDTLSK RFKDLEIGRK IEEALSKPYD ISKTHKDALS FNVYSLPKWE LFRACISREF
0501: LLMKRNYFVY LFKTFQLVLA AIITMTVFIR TRMDIDIIHG NSYMSCLFFA TVVLLVDGIP ELSMTVQRLS VFYKQKQLCF YPAWAYAIPA TVLKIPLSFF
0601: ESLVWTCLTY YVIGYTPEPY RFFRQFMILF AVHFTSISMF RCIAAIFQTG VAAMTAGSFV MLITFVFAGF AIPYTDMPGW LKWGFWVNPI SYAEIGLSVN
0701: EFLAPRWQKM QPTNVTLGRT ILESRGLNYD DYMYWVSLSA LLGLTIIFNT IFTLALSFLK SPTSSRPMIS QDKLSELQGT KDSSVKKNKP LDSSIKTNED
0801: PGKMILPFKP LTITFQDLNY YVDVPVEMKG QGYNEKKLQL LSEITGAFRP GVLTALMGIS GAGKTTLLDV LAGRKTSGYI EGEIRISGFL KVQETFARVS
0901: GYCEQTDIHS PSITVEESLI YSAWLRLVPE INPQTKIRFV KQVLETIELE EIKDALVGVA GVSGLSTEQR KRLTVAVELV ANPSIIFMDE PTTGLDARAA
1001: AIVMRAVKNV AETGRTIVCT IHQPSIHIFE AFDELVLLKR GGRMIYSGPL GQHSSCVIEY FQNIPGVAKI RDKYNPATWM LEVTSESVET ELDMDFAKIY
1101: NESDLYKNNS ELVKELSKPD HGSSDLHFKR TFAQNWWEQF KSCLWKMSLS YWRSPSYNLM RIGHTFISSF IFGLLFWNQG KKIDTQQNLF TVLGAIYGLV
1201: LFVGINNCTS ALQYFETERN VMYRERFAGM YSAFAYALAQ VVTEIPYIFI QSAEFVIVIY PMIGFYASFS KVFWSLYAMF CNLLCFNYLA MFLISITPNF
1301: MVAAILQSLF FTTFNIFAGF LIPKPQIPKW WVWFYYITPT SWTLNLFFSS QYGDIHQKIN AFGETKTVAS FLEDYFGFHH DRLMITAIIL IAFPIALATM
1401: YAFFVAKLNF QKR
Arabidopsis Description
PDR5pleiotropic drug resistance 5 [Source:TAIR;Acc:AT2G37280]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.