Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63361 | Canola | plasma membrane | 20.0 | 69.1 |
| CDY65557 | Canola | plasma membrane | 18.62 | 68.45 |
| CDY58247 | Canola | cytosol | 43.49 | 65.43 |
| CDY65558 | Canola | cytosol | 43.71 | 64.14 |
| KRH02448 | Soybean | plasma membrane | 62.18 | 58.88 |
| CDY18456 | Canola | cytosol, nucleus, plasma membrane | 58.84 | 57.54 |
| CDY65389 | Canola | cytosol | 3.35 | 57.5 |
| CDY55440 | Canola | cytosol, nucleus, plasma membrane | 39.2 | 56.2 |
| CDX74974 | Canola | cytosol | 57.45 | 55.91 |
| CDY52757 | Canola | cytosol, peroxisome, plasma membrane | 58.4 | 55.73 |
| CDY07588 | Canola | cytosol, peroxisome, plasma membrane | 58.18 | 55.52 |
| CDX91350 | Canola | cytosol, peroxisome, plasma membrane | 56.95 | 55.41 |
| GSMUA_Achr3P01060_001 | Banana | plasma membrane | 54.11 | 55.03 |
| TraesCS5B01G155400.3 | Wheat | plasma membrane | 56.15 | 53.99 |
| CDX91351 | Canola | cytosol | 48.44 | 53.88 |
| TraesCS5D01G163700.1 | Wheat | cytosol, peroxisome, plasma membrane | 56.87 | 53.75 |
| TraesCS4B01G054700.1 | Wheat | cytosol, peroxisome, plasma membrane | 56.07 | 53.69 |
| Zm00001d023392_P002 | Maize | cytosol, peroxisome, plasma membrane | 57.45 | 53.67 |
| TraesCS5D01G163500.1 | Wheat | plasma membrane | 56.65 | 53.54 |
| TraesCS7D01G465900.2 | Wheat | cytosol, peroxisome, plasma membrane | 53.96 | 53.34 |
| TraesCS5A01G158100.1 | Wheat | plasma membrane | 56.36 | 53.26 |
| HORVU5Hr1G049490.3 | Barley | nucleus, plastid | 53.96 | 53.23 |
| TraesCS7A01G478500.1 | Wheat | cytosol, peroxisome, plasma membrane | 53.75 | 53.09 |
| CDX74973 | Canola | cytosol | 53.82 | 53.01 |
| TraesCS5A01G158300.1 | Wheat | plasma membrane | 56.15 | 52.99 |
| TraesCS7B01G381200.2 | Wheat | plasma membrane | 54.47 | 52.64 |
| CDY70099 | Canola | cytosol | 16.44 | 52.56 |
| GSMUA_Achr1P18390_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 57.16 | 52.3 |
| TraesCS7B01G381000.1 | Wheat | cytosol, nucleus, plasma membrane | 52.65 | 52.12 |
| TraesCS4A01G384800.1 | Wheat | cytosol, nucleus, plasma membrane | 51.78 | 50.78 |
| OQU91497 | Sorghum | cytosol, nucleus, plasma membrane | 50.55 | 50.33 |
| CDY69529 | Canola | plasma membrane | 26.11 | 50.28 |
| CDX79673 | Canola | cytosol, peroxisome, plasma membrane | 43.85 | 49.39 |
| Os12t0512700-01 | Rice | cytosol, peroxisome | 27.35 | 49.15 |
| CDX67921 | Canola | plasma membrane, plastid | 48.95 | 48.42 |
| CDY39621 | Canola | plastid | 50.47 | 48.33 |
| CDY36534 | Canola | plastid | 50.25 | 48.15 |
| CDX97743 | Canola | plasma membrane | 48.65 | 47.35 |
| CDY36570 | Canola | cytosol, nucleus, plasma membrane, plastid | 48.15 | 46.85 |
| CDY43723 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 49.31 | 46.66 |
| CDY39660 | Canola | cytosol, nucleus, plasma membrane | 47.93 | 46.57 |
| CDX83991 | Canola | plastid | 49.6 | 46.46 |
| CDY20193 | Canola | plasma membrane, plastid | 46.33 | 45.96 |
| CDY30162 | Canola | plasma membrane | 29.24 | 45.22 |
| CDX97864 | Canola | cytosol, peroxisome, plasma membrane | 46.11 | 44.37 |
| CDY29713 | Canola | cytosol, peroxisome, plasma membrane | 45.96 | 44.23 |
| CDX83314 | Canola | cytosol | 45.6 | 44.12 |
| CDX95741 | Canola | cytosol | 45.53 | 44.05 |
| CDY64951 | Canola | cytosol, peroxisome, plasma membrane | 43.78 | 43.62 |
| CDY48188 | Canola | cytosol, peroxisome, plasma membrane | 45.02 | 43.59 |
| CDX77057 | Canola | cytosol, peroxisome, plasma membrane | 44.95 | 43.52 |
| CDX85303 | Canola | cytosol | 43.85 | 43.04 |
| CDY68747 | Canola | plastid | 26.55 | 42.69 |
| CDY69102 | Canola | plastid | 26.25 | 42.37 |
| CDX84561 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 48.07 | 40.53 |
| Os12t0239900-01 | Rice | plasma membrane | 2.11 | 40.28 |
| CDX71718 | Canola | cytosol | 1.24 | 30.36 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | GO:A0A078F068 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans |
| InterPro:ABC_trans_N | InterPro:ABC_transporter-like | EnsemblPlants:CDY06512 | ProteinID:CDY06512 | ProteinID:CDY06512.1 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00122618001 | InterPro:IPR003439 | InterPro:P-loop_NTPase |
| InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 | PFscan:PS50893 |
| PANTHER:PTHR19241 | PANTHER:PTHR19241:SF449 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0004EECE2E |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g11320D
Coordinates
chrLK031970:+:1011993..1018304
Molecular Weight (calculated)
155409.0 Da
IEP (calculated)
8.729
GRAVY (calculated)
0.023
Length
1375 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAQTGADDDE KAQSLQAEFA SGDDKEELRS QWATVERLPT YKRITTALFQ RRDEASDKGR VIDVTKLEAA ERHLLIEKLV KQIQADNLHL LRKIRKRIDE
0101: VGIELPTVEV RFRDLSVEAE CEVVHGKPIP TLWNTVKGIL SEFICSKKET KISILKGLSG IVRPGRMTLL LGPPGCGKTT LLQALSGRLA PSVKVGGEVS
0201: YNGCLLSEFI PEKTSSYISQ NDLHIPEMSV RETLDFSACC LGIGSRMEII KEISRREKVR EIVPDPDIDA YMKAISVIGL KNNMQTDYIL KILGLDICAD
0301: TRVGDASRPG ISGGQKRRLT TGELVVGPAT TLFMDEISNG LDSSTTFQIV SCLQQLAHIA GATILVSLLQ PAPETFELFD DVILMGEGKI IYHAPRADIC
0401: RFFEDFGFKC PERKGVADFL QEVMSKKDQE QYWCLRDKPY SYISVDSFID KFQESNLGVL VKEELSKPFQ KSQSRKDGLC FRKYSLGKWE MLKACSRREY
0501: LLMKRNSFIY LFKSGLLVFN ALVTMTVFLQ AGATTDARHG NYLMGSLFTA LFRLLADGLP ELTLTLSRMG VFCKQKDLYF YPAWAYAIPS IVLKIPLSVF
0601: DSFLWTLLTY YAIGYSPEVG RFFRQFLILF TFNISCVSMF RAIAAIFRTF VASSIIGAIS VLVLSSFGGF VIPKCKFQCK YYNTSELISS NTTAGEQVLD
0701: VRGLNFGRDS YWIGFGALIG FIFFFNVLYA LALTYRNNPQ RSRAIVSHGK NIQPSEEDFK PCPESTSRAK TGKIILPFKP LNVTFQNVQY HIETPQGKKR
0801: QLLWDVTGAL KPGVLTSLMG VSGAGKTTLL DVLSGRKTRG DIKGEIRVGG YPKVQDTFAR VSGYCEQFDI HSPNITVEES LKYSAWLRLP YNIDSKIKNE
0901: LVKEVLETVE LEDIKYSMVG LPGVSGLSTE QRKRLTIAVE LVANPSIIFM DEPTTGLDAR AAAIVMRAVK NVSETGRTVV CTIHQPSIDI FETFDELILM
1001: KNGGQLVYYG PLGRHSSKVI DYFERIPGVP KIQKNCNPAT WMLDITSKYT EEQLGMDFAQ AYKDSTLYKE NKLMVEQLSS ASVGSDALSF PSRFSQTGWG
1101: QLKACLWKQH CSYWRNPSHN LTRIVFMFLN STLCGLLFWQ KAKDINNQQD LFSIFGSMYT LVIFSGINNC ATVMNFIATE RNVFYRERFA RMYSSWAYSF
1201: SQVLVEIPYS FLQSLLCTII VYPMIGYHMS VYKMFWSWYS TFCSLLIFNY CGMLMVALTP NIHMALTLRT TFFSMVNLFA GFTIPKKKIP KWWIWMYYLS
1301: PTSWVLEGLL NSQYGDVDKQ IIAFGETKRV SAFLEDYFGY RYDSLALVAF VLIAFPIVVA SLFAFFMSKL NFQKK
0101: VGIELPTVEV RFRDLSVEAE CEVVHGKPIP TLWNTVKGIL SEFICSKKET KISILKGLSG IVRPGRMTLL LGPPGCGKTT LLQALSGRLA PSVKVGGEVS
0201: YNGCLLSEFI PEKTSSYISQ NDLHIPEMSV RETLDFSACC LGIGSRMEII KEISRREKVR EIVPDPDIDA YMKAISVIGL KNNMQTDYIL KILGLDICAD
0301: TRVGDASRPG ISGGQKRRLT TGELVVGPAT TLFMDEISNG LDSSTTFQIV SCLQQLAHIA GATILVSLLQ PAPETFELFD DVILMGEGKI IYHAPRADIC
0401: RFFEDFGFKC PERKGVADFL QEVMSKKDQE QYWCLRDKPY SYISVDSFID KFQESNLGVL VKEELSKPFQ KSQSRKDGLC FRKYSLGKWE MLKACSRREY
0501: LLMKRNSFIY LFKSGLLVFN ALVTMTVFLQ AGATTDARHG NYLMGSLFTA LFRLLADGLP ELTLTLSRMG VFCKQKDLYF YPAWAYAIPS IVLKIPLSVF
0601: DSFLWTLLTY YAIGYSPEVG RFFRQFLILF TFNISCVSMF RAIAAIFRTF VASSIIGAIS VLVLSSFGGF VIPKCKFQCK YYNTSELISS NTTAGEQVLD
0701: VRGLNFGRDS YWIGFGALIG FIFFFNVLYA LALTYRNNPQ RSRAIVSHGK NIQPSEEDFK PCPESTSRAK TGKIILPFKP LNVTFQNVQY HIETPQGKKR
0801: QLLWDVTGAL KPGVLTSLMG VSGAGKTTLL DVLSGRKTRG DIKGEIRVGG YPKVQDTFAR VSGYCEQFDI HSPNITVEES LKYSAWLRLP YNIDSKIKNE
0901: LVKEVLETVE LEDIKYSMVG LPGVSGLSTE QRKRLTIAVE LVANPSIIFM DEPTTGLDAR AAAIVMRAVK NVSETGRTVV CTIHQPSIDI FETFDELILM
1001: KNGGQLVYYG PLGRHSSKVI DYFERIPGVP KIQKNCNPAT WMLDITSKYT EEQLGMDFAQ AYKDSTLYKE NKLMVEQLSS ASVGSDALSF PSRFSQTGWG
1101: QLKACLWKQH CSYWRNPSHN LTRIVFMFLN STLCGLLFWQ KAKDINNQQD LFSIFGSMYT LVIFSGINNC ATVMNFIATE RNVFYRERFA RMYSSWAYSF
1201: SQVLVEIPYS FLQSLLCTII VYPMIGYHMS VYKMFWSWYS TFCSLLIFNY CGMLMVALTP NIHMALTLRT TFFSMVNLFA GFTIPKKKIP KWWIWMYYLS
1301: PTSWVLEGLL NSQYGDVDKQ IIAFGETKRV SAFLEDYFGY RYDSLALVAF VLIAFPIVVA SLFAFFMSKL NFQKK
0001: MAQTGEDVDK AKSFQVEFAC GNGVDDEEKL RSQWATVERL PTFKRVTTAL LHTGDDSSDI IDVTKLEDAE RRLLIEKLVK QIEADNLRLL RKIRKRIDEV
0101: GIELPTVEVR FNDLSVEAEC QVVHGKPIPT LWNTIKGSLS KFVCSKKETK IGILKGVSGI VRPGRMTLLL GPPGCGKTTL LQALSGRLSH SVKVGGKVSY
0201: NGCLLSEFIP EKTSSYISQN DLHIPELSVR ETLDFSACCQ GIGSRMEIMK EISRREKLKE IVPDPDIDAY MKAISVEGLK NSMQTDYILK ILGLDICADT
0301: RAGDATRPGI SGGQKRRLTT GEIVVGPATT LLMDEISNGL DSSTTFQIVS CLQQLAHIAG ATILISLLQP APETFELFDD VILLGEGKII YHAPRADICK
0401: FFEGCGFKCP ERKGVADFLQ EVMSRKDQEQ YWCHRSKPYS YISVDSFIKK FNESNLGFLL KEELSKPFDK SQTRKDSLCF RKYSLSKWEM LKACSRREIL
0501: LMKRNSFIYL FKSGLLVFNA LVTMTVFLQA GATRDARHGN YLMGSMFTAL FRLLADGLPE LTLTISRLGV FCKQKDLYFY PAWAYAIPSI ILRIPLSVLD
0601: SFIWTVLTYY VIGYSPEVGR FFRHFIILLT FHLSCISMFR AIASICRTFV ACSITGAISV LLLALFGGFV IPKSSMPTWL GWGFWLSPLS YAEIGLTANE
0701: FFSPRWRKLT SGNITAGEQV LDVRGLNFGR HSYWTAFGAL VGFVLFFNAL YTLALTYRNN PQRSRAIVSH GKNSQCSEED FKPCPEITSR AKTGKVILPF
0801: KPLTVTFQNV QYYIETPQGK TRQLLFDITG ALKPGVLTSL MGVSGAGKTT LLDVLSGRKT RGIIKGEIRV GGYPKVQETF ARVSGYCEQF DIHSPNITVE
0901: ESLKYSAWLR LPYNIDAKTK NELVKEVLET VELEDIKDSM VGLPGISGLS TEQRKRLTIA VELVSNPSII FLDEPTTGLD ARAAAIVMRA VKNVAETGRT
1001: VVCTIHQPSI DIFETFDELI LMKDGGQLVY YGPLGKHSSK VIKYFESIPG VPKVQKNCNP ATWMLDITCK SAEHRLGMDF AQAYKDSTLY KENKMVVEQL
1101: SSASLGSEAL SFPSRYSQTG WGQLKACLWK QHCSYWRNPS HNLTRIVFIL LNSLLCSLLF WQKAKDINNQ QDLFSIFGSM YTIVIFSGIN NCATVMNFIA
1201: TERNVFYRER FARMYSSWAY SFSQVLVEVP YSLLQSLLCT IIVYPMIGYH MSVYKMFWSL YSIFCSLLIF NYCGMLMVAL TPNIHMALTL RSTFFSMVNL
1301: FAGFVMPKQK IPKWWIWMYY LSPTSWVLEG LLSSQYGDVE KEITVFGEKK SVSAFLEDYF GYKHDSLAVV AFVLIAFPII VASLFAFFMS KLNFQKK
0101: GIELPTVEVR FNDLSVEAEC QVVHGKPIPT LWNTIKGSLS KFVCSKKETK IGILKGVSGI VRPGRMTLLL GPPGCGKTTL LQALSGRLSH SVKVGGKVSY
0201: NGCLLSEFIP EKTSSYISQN DLHIPELSVR ETLDFSACCQ GIGSRMEIMK EISRREKLKE IVPDPDIDAY MKAISVEGLK NSMQTDYILK ILGLDICADT
0301: RAGDATRPGI SGGQKRRLTT GEIVVGPATT LLMDEISNGL DSSTTFQIVS CLQQLAHIAG ATILISLLQP APETFELFDD VILLGEGKII YHAPRADICK
0401: FFEGCGFKCP ERKGVADFLQ EVMSRKDQEQ YWCHRSKPYS YISVDSFIKK FNESNLGFLL KEELSKPFDK SQTRKDSLCF RKYSLSKWEM LKACSRREIL
0501: LMKRNSFIYL FKSGLLVFNA LVTMTVFLQA GATRDARHGN YLMGSMFTAL FRLLADGLPE LTLTISRLGV FCKQKDLYFY PAWAYAIPSI ILRIPLSVLD
0601: SFIWTVLTYY VIGYSPEVGR FFRHFIILLT FHLSCISMFR AIASICRTFV ACSITGAISV LLLALFGGFV IPKSSMPTWL GWGFWLSPLS YAEIGLTANE
0701: FFSPRWRKLT SGNITAGEQV LDVRGLNFGR HSYWTAFGAL VGFVLFFNAL YTLALTYRNN PQRSRAIVSH GKNSQCSEED FKPCPEITSR AKTGKVILPF
0801: KPLTVTFQNV QYYIETPQGK TRQLLFDITG ALKPGVLTSL MGVSGAGKTT LLDVLSGRKT RGIIKGEIRV GGYPKVQETF ARVSGYCEQF DIHSPNITVE
0901: ESLKYSAWLR LPYNIDAKTK NELVKEVLET VELEDIKDSM VGLPGISGLS TEQRKRLTIA VELVSNPSII FLDEPTTGLD ARAAAIVMRA VKNVAETGRT
1001: VVCTIHQPSI DIFETFDELI LMKDGGQLVY YGPLGKHSSK VIKYFESIPG VPKVQKNCNP ATWMLDITCK SAEHRLGMDF AQAYKDSTLY KENKMVVEQL
1101: SSASLGSEAL SFPSRYSQTG WGQLKACLWK QHCSYWRNPS HNLTRIVFIL LNSLLCSLLF WQKAKDINNQ QDLFSIFGSM YTIVIFSGIN NCATVMNFIA
1201: TERNVFYRER FARMYSSWAY SFSQVLVEVP YSLLQSLLCT IIVYPMIGYH MSVYKMFWSL YSIFCSLLIF NYCGMLMVAL TPNIHMALTL RSTFFSMVNL
1301: FAGFVMPKQK IPKWWIWMYY LSPTSWVLEG LLSSQYGDVE KEITVFGEKK SVSAFLEDYF GYKHDSLAVV AFVLIAFPII VASLFAFFMS KLNFQKK
Arabidopsis Description
ABCG41ABC transporter G family member 41 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC83]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.