CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68747	Canola	plastid	99.3	98.95
CDY70099	Canola	cytosol	36.27	71.86
CDY65389	Canola	cytosol	5.87	62.5
Bra016669.1-P	Field mustard	plastid	98.12	58.18
CDX83991	Canola	plastid	97.3	56.47
CDY36534	Canola	plastid	90.49	53.73
CDY39621	Canola	plastid	90.26	53.55
CDX67921	Canola	plasma membrane, plastid	79.34	48.63
CDY55440	Canola	cytosol, nucleus, plasma membrane	46.71	41.5
CDY58247	Canola	cytosol	44.37	41.36
CDY65558	Canola	cytosol	43.78	39.81
CDX71718	Canola	cytosol	2.58	39.29
CDY20193	Canola	plasma membrane, plastid	63.38	38.96
CDX97743	Canola	plasma membrane	64.55	38.92
PGSC0003DMT400006729	Potato	plastid	67.84	38.53
Solyc03g120980.2.1	Tomato	plastid	67.72	38.47
GSMUA_Achr9P16240_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	65.49	37.2
Zm00001d036986_P002	Maize	plasma membrane	63.03	35.61
Zm00001d046277_P002	Maize	cytosol, nucleus, plasma membrane	63.97	35.39
GSMUA_Achr11P...	Banana	plasma membrane	59.39	35.14
OQU76555	Sorghum	mitochondrion, plasma membrane	52.58	34.65
HORVU7Hr1G088630.1	Barley	vacuole	52.58	34.46
Zm00001d043598_P003	Maize	cytosol, nucleus, plasma membrane	57.98	33.2
EES01392	Sorghum	cytosol, peroxisome, plasma membrane	57.16	32.88
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	51.06	30.79
CDY39660	Canola	cytosol, nucleus, plasma membrane	50.94	30.67
CDY43723	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	51.64	30.28
Os06t0554800-01	Rice	plasma membrane	41.08	29.99
CDX91351	Canola	cytosol	43.31	29.85
TraesCS7A01G356200.1	Wheat	plasma membrane	41.67	29.76
CDY48188	Canola	cytosol, peroxisome, plasma membrane	47.54	28.52
CDY29713	Canola	cytosol, peroxisome, plasma membrane	47.77	28.48
CDX97864	Canola	cytosol, peroxisome, plasma membrane	47.65	28.41
CDX77057	Canola	cytosol, peroxisome, plasma membrane	47.3	28.38
CDY18456	Canola	cytosol, nucleus, plasma membrane	46.71	28.31
CDX95741	Canola	cytosol	46.71	28.01
CDX83314	Canola	cytosol	46.71	28.01
CDY07588	Canola	cytosol, peroxisome, plasma membrane	47.3	27.97
CDX91350	Canola	cytosol, peroxisome, plasma membrane	46.36	27.95
CDY52757	Canola	cytosol, peroxisome, plasma membrane	47.18	27.9
CDX74974	Canola	cytosol	46.13	27.81
CDX74973	Canola	cytosol	44.95	27.44
CDX79673	Canola	cytosol, peroxisome, plasma membrane	39.2	27.35
CDY06512	Canola	cytosol, peroxisome, plasma membrane	42.37	26.25
CDX84561	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	49.18	25.69
CDY64951	Canola	cytosol, peroxisome, plasma membrane	41.55	25.65
CDX85303	Canola	cytosol	41.55	25.27
CDY30162	Canola	plasma membrane	21.36	20.47
CDY69529	Canola	plasma membrane	8.22	9.8
TraesCS7B01G271500.1	Wheat	cytosol	1.88	2.61
CDY65557	Canola	plasma membrane	0.0	0.0
CDY63361	Canola	plasma membrane	0.0	0.0

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078JUC3	UniProt:A0A078JUC3	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	EnsemblPlants:CDY69102	ProteinID:CDY69102	ProteinID:CDY69102.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00083060001	InterPro:IPR003439	InterPro:P-loop_NTPase
InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF224	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004EF47C9
SEG:seg	:	:	:	:	:

Description

BnaA08g31540DBnaA08g31540D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JUC3]

Coordinates

chrLK038658:+:603..4500

Molecular Weight (calculated)

96540.3 Da

IEP (calculated)

8.161

GRAVY (calculated)

-0.052

Length

852 amino acids

Sequence
(BLAST)

001: MDYDPAQAMS RGGSMRRSIN RSVSRASRNL EDIFSSSSRR TKSVNEDEEA LKWAAIEKLP TYSRLRTSLM PALGEDDIYS NQILNKEVDV TKLDGDDRQK
101: FIDMVFKVAE QDNERILTKL RNRINRVGIK LPTVEVKYEH LTVKADCYTG DRSLPSLLNS VRNMGESVLG MVGIQFAKKA QLTILKDVSG IIKPSRMTLL
201: LGPPSSGKTT LLLALAGKLD KSLDISGDVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGIGTRYDLL NELARREKDA GIFPEADVDL
301: FMKASAAQGV KSSIITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLN EATVVISLLQ
401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDERRPY RYIPVHEFAT KFKNFHVGTK LSHELSVPFE
501: KSKGHKAALV FDKYSVKKIE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTVFLR TEMNTRNESD ANMYVSALLF GMIVNMFNGL AEMAMTIQRL
601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FETTAWMGVT YYSIGFAPEA DRFFKQFLVV FLIQQMAAGI FRLIASICRT MTIANTGGML VLLVVFLTGG
701: FLLPRREIPV WWRWAFWASP LSYAFSAISN TELLAPRWMN KMSSDNTTRL GTAVLNIWDV FDDKNWYWVG VGALLAFAVL FNCLFTLALT YLDALGKPQA
801: ILPKEEDHDG SKSKYYFEIP MENMNTKKGM VLPFTPLALS FDDVKYFVDM PA

Best Arabidopsis Sequence Match ( AT1G15210.1 )
(BLAST)

0001: MDYDPAHAMS RGGSMRQTIS RSVSKASRNM EDIFNTSSRR TKSVNEDEEA LKWASIEKLP TYNRLRTSLM PELGEDDVYG NQILNKAVDV TKLDGEERQK
0101: FIDMVFKVAE QDNERILTKL RNRIDRVGIQ LPTVEVRYDH LTVKADCYTG DRSLPSLLNA VRNMGEAALG MIGIRLAKKA QLTILKDVSG IVKPSRMTLL
0201: LGPPSSGKTT LLLALAGKLD KSLDVSGEVT YNGYRLNEFV PIKTSAYISQ NDLHVGIMTV KETLDFSARC QGVGTRYDLL NELARREKDA GIFPEADVDL
0301: FMKASAAQGV KSSLITDYTL KILGLDICKD TIVGDDMMRG ISGGQKKRVT TGEMIVGPTK TLFMDEISTG LDSSTTFQIV KCLQQIVHLT EATVLISLLQ
0401: PAPETFDLFD DIILLSEGQI VYQGPRDHIL EFFESFGFKC PERKGTADFL QEVTSKKDQE QYWVDPNRPY RYIPVSEFAS SFKKFHVGSK LSNELSVPYD
0501: KSKSHKAALM FDKYSIKKTE LLKSCWDKEW MLMKRNSFFY VFKTVQIIII AAITSTLYLR TEMHTRNEID ANIYVGSLLF AMIVNMFNGL AEMAMTIQRL
0601: PVFYKQRDLL FHPPWTYTLP TFLLGIPISI FESTAWMVVT YYSIGYAPDA ERFFKQFLII FLIQQMAAGI FRFIASTCRT MTIANTGGVL VLLVVFLTGG
0701: FLLPRSEIPV WWRWAYWISP LSYAFNAITV NELFAPRWMN KMSGNSTTRL GTSVLNIWDV FDDKNWYWIG VGGLLGFTVI FNGFFTLALT YLDPLGKAQA
0801: ILPKEEDEEA KGKAGSNKET EMESVSAKKG MVLPFTPLAM SFDDVKYFVD MPAEMREQGV QETRLQLLKG VTSAFRPGVL TALMGVSGAG KTTLMDVLAG
0901: RKTGGYIEGD VRVSGFPKKQ ETFARISGYC EQTDIHSPQV TVRESLIFSA FLRLAKEVSK EDKLMFVDQV MELVELVDLR DAIVGLPGVT GLSTEQRKRL
1001: TIAVELVANP SIIFMDEPTS GLDARAAAIV MRAVRNTVDT GRTVVCTIHQ PSIDIFEAFD ELLLMKRGGH VIYSGPLGRN SHKVVEYFES FPGVPKIPEK
1101: YNPATWMLEA SSLAAELKLG VDFAELYKAS ALCQRNKALV QELSVPPQGA TDLYFATQFS QNTWGQFKSC LWKQWWTYWR SPDYNLVRFI FTLATSLMIG
1201: SVFWQIGGKR SNVQDLTMVI GAIYAAVVFV GINNCSTVQP MVAVERTVFY REKAAGMYSA IPYAISQVTC ELPYVLIQTT YYSLIIYSMV GFEWKASKFL
1301: WFIFINYFSF LYWTYYGMMT VSLTPNQQVA SIFASAFYGI FNLFSGFFIP RPKIPKWWVW YYWICPVAWT IYGLITSQYG DVETPIALLG GAPGLTVKQY
1401: IKDQYGFESD YMGPVAGVLV GFTVFFAFIF AFCIKTLNFQ SR

Arabidopsis Description

ABCG35PDR7 [Source:UniProtKB/TrEMBL;Acc:A0A178WAD4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.