CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023065.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	87.31	99.65
CDY65389	Canola	cytosol	4.78	97.5
CDX79673	Canola	cytosol, peroxisome, plasma membrane	72.9	97.38
CDY43723	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	80.99	90.92
AT1G66950.1	Thale cress	plastid	77.93	87.41
VIT_08s0007g03710.t01	Wine grape	plastid	65.67	73.81
KRH67874	Soybean	mitochondrion	27.71	72.32
KRH67876	Soybean	plasma membrane	32.13	68.14
VIT_06s0061g01490.t01	Wine grape	plastid	60.7	68.09
PGSC0003DMT400068277	Potato	cytosol	55.43	67.66
PGSC0003DMT400050158	Potato	cytosol, peroxisome, plasma membrane	59.72	67.36
VIT_13s0074g00680.t01	Wine grape	plastid	60.76	67.14
PGSC0003DMT400050166	Potato	plastid	57.2	67.03
Solyc11g007300.1.1	Tomato	plastid	60.15	67.01
PGSC0003DMT400060396	Potato	plastid	60.64	66.91
Solyc11g007280.1.1	Tomato	plastid	60.15	66.83
Solyc05g055330.2.1	Tomato	plastid	60.33	66.58
Solyc11g067000.1.1	Tomato	extracellular, plastid	59.41	66.23
Os02t0318500-00	Rice	plasma membrane	18.09	64.55
PGSC0003DMT400060117	Potato	cytosol	39.61	63.65
TraesCS5A01G447200.1	Wheat	plasma membrane	47.76	62.62
TraesCS5D01G023400.1	Wheat	plasma membrane	31.39	61.76
Os07t0522500-01	Rice	plasma membrane	18.76	61.57
HORVU7Hr1G037750.8	Barley	cytosol, plasma membrane	41.2	60.49
KXG37059	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	52.05	60.47
HORVU5Hr1G124650.12	Barley	plasma membrane	28.08	60.34
TraesCS5A01G016200.1	Wheat	mitochondrion	52.97	60.21
TraesCS7A01G183900.1	Wheat	plasma membrane	50.64	59.86
TraesCS7D01G185700.2	Wheat	plasma membrane	48.13	59.51
TraesCS4A01G331100.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	52.67	59.49
TraesCS5B01G572600.1	Wheat	plastid	52.97	59.46
TraesCS7B01G000200.1	Wheat	plastid	52.79	59.09
GSMUA_Achr8P07660_001	Banana	mitochondrion, peroxisome, plasma membrane	56.04	59.08
TraesCS5D01G452500.1	Wheat	plastid	52.48	58.99
TraesCS5D01G564000.1	Wheat	plastid	52.61	58.97
TraesCS5B01G449500.1	Wheat	plastid	52.48	58.91
TraesCS7B01G088800.1	Wheat	plastid	52.36	58.86
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	50.71	58.53
Zm00001d025012_P003	Maize	plastid	52.67	58.48
CDY69529	Canola	plasma membrane	25.51	58.26
CDY39660	Canola	cytosol, nucleus, plasma membrane	50.52	58.23
Zm00001d009037_P003	Maize	plastid	52.3	58.23
CDY70099	Canola	cytosol	15.33	58.14
TraesCS2B01G606700.2	Wheat	plastid	52.05	58.07
HORVU5Hr1G106850.1	Barley	cytosol	52.79	57.55
TraesCS2D01G051800.1	Wheat	plasma membrane	49.36	57.5
Zm00001d021647_P003	Maize	plastid	50.89	57.4
CDX97743	Canola	plasma membrane	49.66	57.32
CDX67921	Canola	plasma membrane, plastid	48.8	57.27
KXG36359	Sorghum	plastid	51.01	57.1
Zm00001d034940_P003	Maize	plastid	51.99	56.91
CDY30162	Canola	plasma membrane	30.84	56.58
Os11t0587600-01	Rice	plasma membrane	22.87	56.09
CDY39621	Canola	plastid	49.23	55.92
CDY20193	Canola	plasma membrane, plastid	47.52	55.92
CDY36534	Canola	plastid	48.87	55.54
CDY48188	Canola	cytosol, peroxisome, plasma membrane	47.88	55.0
CDX77057	Canola	cytosol, peroxisome, plasma membrane	47.88	55.0
CDX83991	Canola	plastid	48.44	53.81
CDX97864	Canola	cytosol, peroxisome, plasma membrane	45.19	51.57
CDX95741	Canola	cytosol	44.88	51.51
CDY29713	Canola	cytosol, peroxisome, plasma membrane	45.06	51.43
CDX83314	Canola	cytosol	44.7	51.3
CDY64951	Canola	cytosol, peroxisome, plasma membrane	42.24	49.93
CDX85303	Canola	cytosol	42.86	49.89
CDY52757	Canola	cytosol, peroxisome, plasma membrane	43.72	49.48
CDY07588	Canola	cytosol, peroxisome, plasma membrane	43.65	49.41
CDY18456	Canola	cytosol, nucleus, plasma membrane	42.55	49.36
CDY68747	Canola	plastid	25.87	49.36
CDY55440	Canola	cytosol, nucleus, plasma membrane	28.94	49.22
CDY69102	Canola	plastid	25.69	49.18
CDX74974	Canola	cytosol	42.31	48.83
CDX91350	Canola	cytosol, peroxisome, plasma membrane	42.24	48.76
CDY06512	Canola	cytosol, peroxisome, plasma membrane	40.53	48.07
CDX91351	Canola	cytosol	35.87	47.33
CDX74973	Canola	cytosol	39.85	46.56
CDX71718	Canola	cytosol	1.59	46.43
CDY63361	Canola	plasma membrane	11.16	45.73
CDY58247	Canola	cytosol	25.26	45.08
CDY65558	Canola	cytosol	25.08	43.65
CDY65557	Canola	plasma membrane	9.75	42.51
Os07t0522600-02	Rice	plasma membrane	0.06	0.16

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078D5H3	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	EnsemblPlants:CDX84561	ProteinID:CDX84561	ProteinID:CDX84561.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00141815001	InterPro:IPR003439	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF322	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004EDED51	SEG:seg

Description

BnaA03g16690D

Coordinates

chrLK031838:-:98055..106359

Molecular Weight (calculated)

184198.0 Da

IEP (calculated)

6.681

GRAVY (calculated)

-0.006

Length

1631 amino acids

Sequence
(BLAST)

0001: MLGRDEDLVR TKSRRGSLGS SSYRSLRGAS RSFRDVLILP AEDNVCGRSE RREEDDVELK WAALERLPTY DRLRKGMLPQ QTSVNGKAGL EEVDLTKLAP
0101: KEKKHLMEII LKFVEEDNEK FLRRLRERTD RVGIEVPKIE VRYENISVQG DVRSASRALP TLFNVTLNTL ESILGMFHLL PSKKSKIQIL KNISGIVKPS
0201: RMTLLLGPPS SGKTTFLQAL AGKLDDTLQM SGRITYCGHE FSEFVPQKTC AYISQHDLHF GEMTVRETLD FSGRCLGVGT RYQMLTELSR KEREAGIKPD
0301: PEIDAFMKSI AISGQETSLV TDYVLKILGL DICADIPVGD EMRRGVSGGQ MKRLTTAGEM LVGPATALFM DEISTGLDSS TTFQICKFMR QLLFDDIILL
0401: SEGHIVYQGP RDKVLEFFEY MGFQCPERKG MSGRITYCGH EFSEFVPQKT CAYISQHDLH FGEMTVRETL DFSGRCLGVG TRYQMLTELS RKEREAGIKP
0501: DPEIDAFMKS IAISGQETSL VTDYVLKILG LDICADIPVG DEIRRGVSGG QRKRLTTAGE MLVGPATALF MDEISTGLDS STTFQICKFM RQLVHISDVT
0601: MIISLLQPAP ETFDLFDDII LLSEGHIVYQ GPRDKVLEFF EYMGFQCPER KGVADFLQEV TSKKDQEQYW NRREQPYSYV SESDFSSAFN SFHTGQQLAS
0701: DMRVPYEKAK THPAALVTQK YGISNRDLFK ACFDREWLLM KRNSFVYVFK TVQITIMSLI AMTVYLRTEM HVGTVADGQK FYGALFFSLI NVLFNGMVEL
0801: GFTVMRLPVF YKQRDFLFYP PWAFALPAWL LKIPLSLIES GIWIAFTYYT IGFAPAASRF LGAVGRTEVI SNSVGTFTML IIFTLGGFII AKDDIPPWMT
0901: WAYYISPMMY GQTAIVMNEF LDDRWGAPNN DTRINAKTVG EVLLKSRGFV TEPYWFWICI VALLGFSLLF NLFYIIALMY LNPLGNSKAT VAEEDKDKQK
1001: GTEGSLVELS SRSSNGPKRG MVLPFQPLSL AFNNVNYYVD MPAEMKAQGV EGDRLQLLRD VGGAFRPGIL TALVGVSGAG KTTLMDVLAG RKTGGNVEGS
1101: ISISGYPKNQ STFARVSGYC EQNDIHSPHV TVYESLIYSA WLRLSVDIDA KTREMFVEEV MELVELKPLR NSIVGLPGVD GLSTEQRKRL TIAVELVANP
1201: SIIFMDEPTS GLDARAAAIV MRTVRNTVDT GRTVVCTIHQ PSIDIFESFD ELLLMKRGGQ VIYAGSLGHQ SQKLIEYFEA VEGVPKIKDG YNPATWMLDV
1301: TTPSMESQMS LDFAQIFTNS SLYGRNQELI KELSTPPPGS NDLYFPTKYS QPFWTQTKAC LWKQYWSNWR FPQYNSIRFL MTIAFGVLFG LIFWQTGTKI
1401: EKEQDLNNFF GAMYAAVLFL GATNAAAVQP VIAIERTVFY REKAAGMYSA IPYAISKVAV EIMYNTIQTG VYTLILYSMI GYDWTVTKFF WFYYYMLTSF
1501: IYFTLYGMML MALTPNPQIA GICMSFFVVL WNLFSGFLIP RPQIPIWWRW YYWATPVAWT LYGIITSQVG DKDSIVQITG VGDMSLKTLL KNGFGFEHDF
1601: LPVVAAVHIA WILLFAFVFA YGIKFLNFQR R

Best Arabidopsis Sequence Match ( AT1G66950.1 )
(BLAST)

0001: MAAMLGRDED PVGALSGRVS LASTSHRSLV GASKSFRDVF MPQTDEVFGR SERREEDDME LRWAAIERLP TFDRLRKGML PQTSANGKIE LEDIDLTRLE
0101: PKDKKHLMEM ILSFVEEDNE KFLRDLRERT DRVGIEVPKI EVRYENISVE GDVRSASRAL PTLFNVTLNT LESILGFFHL LPSKRKKIQI LKDISGIVKP
0201: SRMTLLLGPP SSGKTTLLQA LAGKLDDTLQ MSGRITYCGH EFREFVPQKT CAYISQHDLH FGEMTVREIL DFSGRCLGVG SRYQLMSELS RREKEEGIKP
0301: DPKIDAFMKS IAISGQETSL VTDYVLKILG LDICADILAG DVMRRGISGG QKKRLTTGEM LVGPARALFM DEISTGLDSS TTFQICKFMR QLVHISDVTM
0401: IISLLQPAPE TFELFDDIIL LSEGQIVYQG PRDNVLEFFE YFGFQCPERK GVADFLQEVT SKKDQEQYWN KREQPYNYVS VSDFSSGFST FHTGQKLTSE
0501: FRVPYDKAKT HSAALVTQKY GISNWELFKA CFDREWLLMK RNSFVYVFKT VQITIMSLIT MTVYLRTEMH VGTVRDGQKF YGAMFFSLIN VMFNGLAELA
0601: FTVMRLPVFY KQRDFLFYPP WAFALPAWLL KIPLSLIESG IWIGLTYYTI GFAPSAARFF RQLLAYFCVN QMALSLFRFL GAIGRTEVIS NSIGTFTLLI
0701: VFTLGGFIIA KDDIRPWMTW AYYMSPMMYG QTAIVMNEFL DERWSSPNYD TRINAKTVGE VLLKSRGFFT EPYWFWICIV ALLGFSLLFN LFYILALMYL
0801: NPLGNSKATV VEEGKDKQKG ENRGTEGSVV ELNSSSNKGP KRGMVLPFQP LSLAFNNVNY YVDMPSEMKA QGVEGDRLQL LRDVGGAFRP GILTALVGVS
0901: GAGKTTLMDV LAGRKTGGYI EGSISISGYP KNQTTFARVS GYCEQNDIHS PHVTVYESLI YSAWLRLSTD IDIKTRELFV EEVMELVELK PLRNSIVGLP
1001: GVDGLSTEQR KRLTIAVELV ANPSIIFMDE PTSGLDARAA AIVMRTVRNT VDTGRTVVCT IHQPSIDIFE SFDELLLMKR GGQVIYAGSL GHHSQKLVEY
1101: FEAVEGVPKI NDGYNPATWM LDVTTPSMES QMSLDFAQIF SNSSLYRRNQ ELIKDLSTPP PGSKDVYFKT KYAQSFSTQT KACFWKQYWS YWRHPQYNAI
1201: RFLMTVVIGV LFGLIFWQIG TKTENEQDLN NFFGAMYAAV LFLGALNAAT VQPAIAIERT VFYREKAAGM YSAIPYAISQ VAVEIMYNTI QTGVYTLILY
1301: SMIGCNWTMA KFLWFYYYML TSFIYFTLYG MMLMALTPNY QIAGICMSFF LSLWNLFSGF LIPRPQIPIW WRWYYWATPV AWTLYGLITS QVGDKDSMVH
1401: ISGIGDIDLK TLLKEGFGFE HDFLPVVAVV HIAWILLFLF VFAYGIKFLN FQRR

Arabidopsis Description

ABCG39ABC transporter G family member 39 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.