Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G447200.1 | Wheat | plasma membrane | 83.28 | 97.27 |
| TraesCS5D01G452500.1 | Wheat | plastid | 96.49 | 96.62 |
| HORVU5Hr1G106850.1 | Barley | cytosol | 93.53 | 90.84 |
| TraesCS5B01G572600.1 | Wheat | plastid | 89.54 | 89.54 |
| TraesCS7B01G000200.1 | Wheat | plastid | 89.26 | 89.02 |
| TraesCS7B01G088800.1 | Wheat | plastid | 82.45 | 82.56 |
| Os02t0318500-00 | Rice | plasma membrane | 25.4 | 80.74 |
| TraesCS2B01G606700.2 | Wheat | plastid | 81.0 | 80.51 |
| KXG37059 | Sorghum | cytosol, mitochondrion, peroxisome, plasma membrane | 77.36 | 80.06 |
| Os11t0587600-01 | Rice | plasma membrane | 36.06 | 78.8 |
| Zm00001d009037_P003 | Maize | plastid | 79.01 | 78.36 |
| Zm00001d025012_P003 | Maize | plastid | 79.08 | 78.22 |
| Zm00001d034940_P003 | Maize | plastid | 79.15 | 77.18 |
| CDY65389 | Canola | cytosol | 3.99 | 72.5 |
| KRH67874 | Soybean | mitochondrion | 28.15 | 65.44 |
| CDX79673 | Canola | cytosol, peroxisome, plasma membrane | 53.13 | 63.23 |
| VIT_06s0061g01490.t01 | Wine grape | plastid | 62.49 | 62.45 |
| VIT_08s0007g03710.t01 | Wine grape | plastid | 62.35 | 62.44 |
| PGSC0003DMT400068277 | Potato | cytosol | 55.95 | 60.85 |
| CDY43723 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 60.84 | 60.84 |
| AT2G36380.1 | Thale cress | cytosol, mitochondrion, peroxisome, plasma membrane | 60.29 | 60.29 |
| KRH34743 | Soybean | plasma membrane | 49.83 | 59.93 |
| PGSC0003DMT400050166 | Potato | plastid | 57.33 | 59.84 |
| Bra023065.1-P | Field mustard | cytosol, mitochondrion, peroxisome, plasma membrane | 58.84 | 59.83 |
| Solyc11g007300.1.1 | Tomato | plastid | 60.15 | 59.7 |
| PGSC0003DMT400050158 | Potato | cytosol, peroxisome, plasma membrane | 59.12 | 59.41 |
| Solyc11g007280.1.1 | Tomato | plastid | 60.01 | 59.4 |
| Solyc11g067000.1.1 | Tomato | extracellular, plastid | 59.67 | 59.26 |
| AT1G66950.1 | Thale cress | plastid | 59.26 | 59.22 |
| PGSC0003DMT400060396 | Potato | plastid | 59.94 | 58.93 |
| KRH67876 | Soybean | plasma membrane | 31.18 | 58.91 |
| VIT_13s0074g00680.t01 | Wine grape | plastid | 59.74 | 58.81 |
| Solyc05g055330.2.1 | Tomato | plastid | 59.6 | 58.59 |
| TraesCS7B01G271500.1 | Wheat | cytosol | 24.57 | 58.14 |
| KRH71633 | Soybean | nucleus | 59.12 | 58.04 |
| GSMUA_Achr8P07660_001 | Banana | mitochondrion, peroxisome, plasma membrane | 61.6 | 57.85 |
| KRG92040 | Soybean | extracellular | 57.6 | 56.78 |
| TraesCS6B01G205900.1 | Wheat | plasma membrane | 56.02 | 56.37 |
| TraesCS3B01G248400.1 | Wheat | cytosol, peroxisome, plasma membrane | 56.23 | 56.19 |
| TraesCS3B01G248500.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 55.88 | 56.04 |
| TraesCS3B01G523700.1 | Wheat | mitochondrion | 41.16 | 55.89 |
| TraesCS3B01G524400.1 | Wheat | cytosol, peroxisome, plasma membrane | 55.13 | 55.7 |
| TraesCS2B01G149900.1 | Wheat | cytosol, peroxisome, plasma membrane | 47.56 | 55.64 |
| TraesCS5B01G183500.1 | Wheat | cytosol, nucleus, plasma membrane | 55.4 | 55.59 |
| TraesCS7B01G292700.1 | Wheat | plasma membrane | 54.51 | 55.38 |
| PGSC0003DMT400060117 | Potato | cytosol | 38.68 | 55.37 |
| TraesCS3B01G306400.2 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 55.82 | 54.95 |
| CDX84561 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 58.91 | 52.48 |
| TraesCS3B01G141700.2 | Wheat | golgi, unclear | 51.62 | 52.41 |
| TraesCS7B01G167100.1 | Wheat | cytosol, nucleus, plasma membrane | 47.76 | 51.41 |
| TraesCS5B01G517700.1 | Wheat | plasma membrane | 33.59 | 50.57 |
| TraesCS4B01G331400.3 | Wheat | plasma membrane | 34.76 | 50.55 |
| TraesCS4B01G332300.3 | Wheat | cytosol, nucleus, plasma membrane | 46.52 | 50.22 |
| TraesCS7B01G005200.1 | Wheat | plasma membrane | 43.56 | 47.92 |
| TraesCS4B01G054700.1 | Wheat | cytosol, peroxisome, plasma membrane | 47.14 | 47.7 |
| TraesCS7B01G381200.2 | Wheat | plasma membrane | 46.39 | 47.36 |
| TraesCS7B01G381000.1 | Wheat | cytosol, nucleus, plasma membrane | 45.15 | 47.23 |
| TraesCS5B01G155400.3 | Wheat | plasma membrane | 46.46 | 47.2 |
| Bra017241.1-P | Field mustard | cytosol, mitochondrion, nucleus, plasma membrane | 60.84 | 38.94 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans |
| InterPro:ABC_trans_N | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 |
| PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF214 | SMART:SM00382 | SUPFAM:SSF52540 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS5B01G449500 | EnsemblPlants:TraesCS5B01G449500.1 | TIGR:cd03232 | TIGR:cd03233 | SEG:seg | : |
Description
No Description!
Coordinates
chr5B:-:621841253..621849755
Molecular Weight (calculated)
163249.0 Da
IEP (calculated)
7.326
GRAVY (calculated)
0.036
Length
1453 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEPSSTAGLQ LGPLSGSRRS ASAASWGSRR SGSISHSLRQ QAGADDPFGR AASRQGHDDD EENLRWAALE KLPTYDRMRR AVVLSNHAAV DGADAAAHEL
0101: QGLVDINQLA SGEAGRALLE RVFQDDSERF LRRLRDRVDR VGIDLPAIEV RYQGLSVEVD AFVGSRALPT LWNSATNFLQ GLVGRLASSN KRTINILQDV
0201: NGIIKPSRMT LLLGPPSSGK STFMRALTGK LDKALKVSGS ITYCGHTFEE FYPERTSAYV SQYDLHNAEM TVRETLDFSR RCLGVGARYD MLAELAARER
0301: EAGIKPDPEI DAYMKATAVQ GQESNIVTDL TLKVLGLDIC ADMPIGDEMI RGISGGQRKR VTTGEMLTGP ARALFMDEIS TGLDSSSTFQ IVKYIRQLVH
0401: VMNETVMISL LQPPPETYNL FDDIILLSEG YVVYHGPREN ILEFFESAGF RCPERKGVAD FLQEVTSKKD QQQYWYLDQE QYRHVSVPEF AVRFKSFHVG
0501: QRMLKELQIP FDKSKTHPAA LTTNKYGQSS WESFKTVMSR EKLLMKRNSF IYIFKVSQLV ILGIIAMTVF LRTKMPHGQF SDSNKFFGAL TFSLMAVLFN
0601: GFAELQFTIK MLPTFYKQRD FLFFPPWTIG LVNIITKVPV SLVESMVWVV LTYYVMGFAP AAGRFFRMLL VFFATHQMAM GLFRFLGAVL KSMLVANTLG
0701: MFVILIIFVF GGFVIPRGDI RPWWIWAYWA SPMMYSQNAI SVNEFLSSRW ANPNNDTSID ARTVGEAILK AKGYFTRDSG FWVSIGAIVG FTILFNILYL
0801: LALTYLSFGS SSNTVSDEEN ENETNTSIPI DEATNRPTRS QITLPFQPLS LSFNHVNYYV DMPAEMREQG FTESRLQLLS DISGAFRPGV LTALVGVSGA
0901: GKTTLMDVLA GRKTSGSVEG SITLSGYPKN QETFARVSGY CEQTDIHSPN VTVYESILYS AWLRLSSDVD ENTRKMFVEE VMTLVELDVL RNAMVGLPGV
1001: DGLSTEQRKR LTIAVELVAN PSIIFMDEPT SGLDARAAAI VMRAVRNTVN TGRTVVCTIH QPSIDIFESF DELLLMKRGG RVIYAGELGQ HSHKLVEYFE
1101: AIPGVEKITE GYNPATWMLE VSSPLAEARL NVNFAEIYAN SDLYRKNQEL IKELSIPPPG YEDLSFPTKY SQNFYNQCVA NFWKQYKSYW KNPPHNAMRF
1201: LMTMIYGLVF GTVFWQKGTK IDSPQDLYNL LGATYAAVFF LGSANCITIQ PVVSIERTVF YREKAAGMYS PLSYALAQTC VEMIYNIVQG IQYTVTIYAM
1301: IGYEWKVAKF FYFLFFIISC FNYFTLFGMM LVALTSSSML ANIPIAFILP LWNLFAGFLV ARPLIPIWWR WYYWANPVSW TIYGVIGSQF GDNTTPLSVV
1401: AGGSPTVVKQ FLEDSLGIKH DFLGYVVLAH FAYVIGFFLV FGYSIKVLNF QKR
0101: QGLVDINQLA SGEAGRALLE RVFQDDSERF LRRLRDRVDR VGIDLPAIEV RYQGLSVEVD AFVGSRALPT LWNSATNFLQ GLVGRLASSN KRTINILQDV
0201: NGIIKPSRMT LLLGPPSSGK STFMRALTGK LDKALKVSGS ITYCGHTFEE FYPERTSAYV SQYDLHNAEM TVRETLDFSR RCLGVGARYD MLAELAARER
0301: EAGIKPDPEI DAYMKATAVQ GQESNIVTDL TLKVLGLDIC ADMPIGDEMI RGISGGQRKR VTTGEMLTGP ARALFMDEIS TGLDSSSTFQ IVKYIRQLVH
0401: VMNETVMISL LQPPPETYNL FDDIILLSEG YVVYHGPREN ILEFFESAGF RCPERKGVAD FLQEVTSKKD QQQYWYLDQE QYRHVSVPEF AVRFKSFHVG
0501: QRMLKELQIP FDKSKTHPAA LTTNKYGQSS WESFKTVMSR EKLLMKRNSF IYIFKVSQLV ILGIIAMTVF LRTKMPHGQF SDSNKFFGAL TFSLMAVLFN
0601: GFAELQFTIK MLPTFYKQRD FLFFPPWTIG LVNIITKVPV SLVESMVWVV LTYYVMGFAP AAGRFFRMLL VFFATHQMAM GLFRFLGAVL KSMLVANTLG
0701: MFVILIIFVF GGFVIPRGDI RPWWIWAYWA SPMMYSQNAI SVNEFLSSRW ANPNNDTSID ARTVGEAILK AKGYFTRDSG FWVSIGAIVG FTILFNILYL
0801: LALTYLSFGS SSNTVSDEEN ENETNTSIPI DEATNRPTRS QITLPFQPLS LSFNHVNYYV DMPAEMREQG FTESRLQLLS DISGAFRPGV LTALVGVSGA
0901: GKTTLMDVLA GRKTSGSVEG SITLSGYPKN QETFARVSGY CEQTDIHSPN VTVYESILYS AWLRLSSDVD ENTRKMFVEE VMTLVELDVL RNAMVGLPGV
1001: DGLSTEQRKR LTIAVELVAN PSIIFMDEPT SGLDARAAAI VMRAVRNTVN TGRTVVCTIH QPSIDIFESF DELLLMKRGG RVIYAGELGQ HSHKLVEYFE
1101: AIPGVEKITE GYNPATWMLE VSSPLAEARL NVNFAEIYAN SDLYRKNQEL IKELSIPPPG YEDLSFPTKY SQNFYNQCVA NFWKQYKSYW KNPPHNAMRF
1201: LMTMIYGLVF GTVFWQKGTK IDSPQDLYNL LGATYAAVFF LGSANCITIQ PVVSIERTVF YREKAAGMYS PLSYALAQTC VEMIYNIVQG IQYTVTIYAM
1301: IGYEWKVAKF FYFLFFIISC FNYFTLFGMM LVALTSSSML ANIPIAFILP LWNLFAGFLV ARPLIPIWWR WYYWANPVSW TIYGVIGSQF GDNTTPLSVV
1401: AGGSPTVVKQ FLEDSLGIKH DFLGYVVLAH FAYVIGFFLV FGYSIKVLNF QKR
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.