CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65389	Canola	cytosol	6.47	98.75
CDY43723	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	93.61	78.66
AT1G66950.1	Thale cress	plastid	90.25	75.79
CDX84561	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	97.38	72.9
KRH67874	Soybean	mitochondrion	37.02	72.32
KRH67876	Soybean	plasma membrane	42.92	68.14
VIT_08s0007g03710.t01	Wine grape	plastid	77.07	64.85
TraesCS5D01G023400.1	Wheat	plasma membrane	42.83	63.09
PGSC0003DMT400050166	Potato	plastid	70.68	62.0
TraesCS5A01G447200.1	Wheat	plasma membrane	63.15	61.98
Os07t0522500-01	Rice	plasma membrane	25.14	61.77
HORVU7Hr1G037750.8	Barley	cytosol, plasma membrane	56.18	61.75
PGSC0003DMT400050158	Potato	cytosol, peroxisome, plasma membrane	71.66	60.51
HORVU5Hr1G124650.12	Barley	plasma membrane	37.59	60.47
VIT_06s0061g01490.t01	Wine grape	plastid	71.99	60.45
PGSC0003DMT400068277	Potato	cytosol	65.93	60.25
Os02t0318500-00	Rice	plasma membrane	22.44	59.96
Solyc11g007300.1.1	Tomato	plastid	71.25	59.43
VIT_13s0074g00680.t01	Wine grape	plastid	71.66	59.28
PGSC0003DMT400060396	Potato	plastid	71.66	59.2
Solyc11g007280.1.1	Tomato	plastid	71.09	59.13
Solyc05g055330.2.1	Tomato	plastid	71.5	59.07
TraesCS7D01G185700.2	Wheat	plasma membrane	63.39	58.68
Solyc11g067000.1.1	Tomato	extracellular, plastid	70.19	58.58
CDY69529	Canola	plasma membrane	34.07	58.26
CDY30162	Canola	plasma membrane	41.93	57.59
TraesCS7A01G183900.1	Wheat	plasma membrane	62.98	55.72
KXG37059	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	63.23	54.99
TraesCS5A01G016200.1	Wheat	mitochondrion	64.05	54.49
TraesCS5B01G572600.1	Wheat	plastid	64.21	53.96
TraesCS4A01G331100.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	63.64	53.81
TraesCS7B01G000200.1	Wheat	plastid	63.88	53.53
TraesCS5D01G564000.1	Wheat	plastid	63.72	53.47
TraesCS7B01G088800.1	Wheat	plastid	63.47	53.41
TraesCS5B01G449500.1	Wheat	plastid	63.23	53.13
PGSC0003DMT400060117	Potato	cytosol	44.14	53.1
TraesCS5D01G452500.1	Wheat	plastid	62.98	53.0
TraesCS2B01G606700.2	Wheat	plastid	62.9	52.53
TraesCS2D01G051800.1	Wheat	plasma membrane	60.03	52.36
GSMUA_Achr8P07660_001	Banana	mitochondrion, peroxisome, plasma membrane	66.18	52.23
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	60.44	52.23
Zm00001d025012_P003	Maize	plastid	62.82	52.21
Zm00001d009037_P003	Maize	plastid	62.41	52.01
CDY39660	Canola	cytosol, nucleus, plasma membrane	60.2	51.94
HORVU5Hr1G106850.1	Barley	cytosol	63.47	51.8
CDX97743	Canola	plasma membrane	59.38	51.31
KXG36359	Sorghum	plastid	61.1	51.2
Zm00001d021647_P003	Maize	plastid	60.61	51.18
Zm00001d034940_P003	Maize	plastid	62.33	51.07
CDX67921	Canola	plasma membrane, plastid	58.07	51.01
CDY39621	Canola	plastid	58.72	49.93
CDY48188	Canola	cytosol, peroxisome, plasma membrane	58.07	49.93
CDX77057	Canola	cytosol, peroxisome, plasma membrane	57.99	49.86
CDY20193	Canola	plasma membrane, plastid	56.43	49.71
CDY36534	Canola	plastid	58.23	49.55
CDX83991	Canola	plastid	57.74	48.02
CDX97864	Canola	cytosol, peroxisome, plasma membrane	54.79	46.82
CDY29713	Canola	cytosol, peroxisome, plasma membrane	54.55	46.61
CDX95741	Canola	cytosol	54.22	46.59
CDX83314	Canola	cytosol	53.97	46.38
CDY63361	Canola	plasma membrane	14.91	45.73
CDY18456	Canola	cytosol, nucleus, plasma membrane	51.6	44.81
CDY52757	Canola	cytosol, peroxisome, plasma membrane	52.5	44.48
CDY07588	Canola	cytosol, peroxisome, plasma membrane	52.33	44.34
CDX74974	Canola	cytosol	51.19	44.23
CDY64951	Canola	cytosol, peroxisome, plasma membrane	49.96	44.2
CDX85303	Canola	cytosol	50.61	44.11
CDX91350	Canola	cytosol, peroxisome, plasma membrane	51.02	44.09
CDY06512	Canola	cytosol, peroxisome, plasma membrane	49.39	43.85
CDY55440	Canola	cytosol, nucleus, plasma membrane	33.42	42.54
CDY65557	Canola	plasma membrane	13.02	42.51
CDX91351	Canola	cytosol	42.18	41.67
CDX74973	Canola	cytosol	47.42	41.48
Os11t0587600-01	Rice	plasma membrane	22.52	41.35
CDY68747	Canola	plastid	27.6	39.42
CDY69102	Canola	plastid	27.35	39.2
CDY58247	Canola	cytosol	29.24	39.06
CDY65558	Canola	cytosol	29.07	37.89
CDY70099	Canola	cytosol	12.69	36.05
Os07t0522600-02	Rice	plasma membrane	0.08	0.16
CDX71718	Canola	cytosol	0.0	0.0

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078CX11	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	EnsemblPlants:CDX79673	ProteinID:CDX79673	ProteinID:CDX79673.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00132469001	InterPro:IPR003439	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005
PFAM:PF01061	PFAM:PF08370	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF322	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004EE9968	SEG:seg	:	:

Description

BnaC03g20090D

Coordinates

chrLK031818:+:1497722..1502943

Molecular Weight (calculated)

138313.0 Da

IEP (calculated)

6.472

GRAVY (calculated)

0.121

Length

1221 amino acids

Sequence
(BLAST)

0001: MSGRITYCGH EFSEFVPQKT CAYISQHDLH FGEMTVRETL DFSGRCLGVG TRYQMLTELS RKEREAGIKP DPEIDAFMKS IAISGQETSL VTDYVLKILG
0101: LDICADIPVG DEIRRGVSGG QRKRLTTAGE MLVGPATALF MDEISTGLDS STTFQICKFM RQLVHISDVT MIISLLQPAP ETFDLFDDII LLSEGHIVYQ
0201: GPRDKVLEFF EYMGFQCPER KGVADFLQEV TSKKDQEQYW NRREQPYSYV SVSDFSSAFN SFHTGQQLAS DMRVPYEKAK THPAALVTQK YGISNWDLFK
0301: ACFDREWLLM KRNSFVYVFK TVQITIMSLI AMTVYLRTEM HVGTVADGQK FYGGLFFSLI NVLFNGMVEL GFTVMRLPVF YKQRDFLFYP PWAFALPAWL
0401: LKIPLSLIES GIWIAFTYYT IGFAPAVSRF FRQLLAYFCV NQMALSLFRF LGAVGRTEVI SNSVGTFTML IIFTLGGFII AKDDIPPWMT WAYYISPMMY
0501: GQTAIVMNEF LDDRWGAPKN DTRINAKTVG EVLLKSRGFS TEPYWFWICI VALLGFSLLF NLFYIIALMY LNPLGDSKAT VAEEDKDKQK GTEGSLVELS
0601: SRSSNGPKRG MVLPFQPLSL AFNNVNYYVD MPAEMKAQGV EGDRLQLLRD VGGAFRPGIL TALVGVSGAG KTTLMDVLAG RKTGGNVEGS ISISGYPKNQ
0701: STFARVSGYC EQNDIHSPHV TVYESLIYSA WLRLSVDIDA KTREMFVEEV MELVELKPLR NSIVGLPGVD GLSTEQRKRL TIAVELVANP SIIFMDEPTS
0801: GLDARAAAIV MRTVRNTVDT GRTVVCTIHQ PSIDIFESFD ELLLMKRGGQ VIYAGSLGHH SQKLIEYFEA VEGVPKINDG YNPATWMLDV TTPSMESQMS
0901: LDFAQIFTNS SLYPRNQELI KELSTPPPGS NDLYFPTKYS QPFWTQTKAC LWKQYWSNWR FPQYNSIRFL MTIAFGVLFG LIFWQTGTKI EKEQDLNNFF
1001: GAMYAAVLFL GATNAAAVQP VIAIERTVFY REKAAGMYSA IPYAISKVAV EIMYNTIQTG VYTLILYSMI GYDWTVTKFF WFYYYMLTSF IYFTLYGMML
1101: MALTPNPQIA GICMSFFVVL WNLFSGFLIP RPQIPIWWRW YYWATPVAWT LYGIITSQVG DKDSIVQITG VGDMSLKTLL KNGFGFEHDF LPVVAAVHIA
1201: WILLFAFVFA YGIKFLNFQR R

Best Arabidopsis Sequence Match ( AT1G66950.1 )
(BLAST)

0001: MAAMLGRDED PVGALSGRVS LASTSHRSLV GASKSFRDVF MPQTDEVFGR SERREEDDME LRWAAIERLP TFDRLRKGML PQTSANGKIE LEDIDLTRLE
0101: PKDKKHLMEM ILSFVEEDNE KFLRDLRERT DRVGIEVPKI EVRYENISVE GDVRSASRAL PTLFNVTLNT LESILGFFHL LPSKRKKIQI LKDISGIVKP
0201: SRMTLLLGPP SSGKTTLLQA LAGKLDDTLQ MSGRITYCGH EFREFVPQKT CAYISQHDLH FGEMTVREIL DFSGRCLGVG SRYQLMSELS RREKEEGIKP
0301: DPKIDAFMKS IAISGQETSL VTDYVLKILG LDICADILAG DVMRRGISGG QKKRLTTGEM LVGPARALFM DEISTGLDSS TTFQICKFMR QLVHISDVTM
0401: IISLLQPAPE TFELFDDIIL LSEGQIVYQG PRDNVLEFFE YFGFQCPERK GVADFLQEVT SKKDQEQYWN KREQPYNYVS VSDFSSGFST FHTGQKLTSE
0501: FRVPYDKAKT HSAALVTQKY GISNWELFKA CFDREWLLMK RNSFVYVFKT VQITIMSLIT MTVYLRTEMH VGTVRDGQKF YGAMFFSLIN VMFNGLAELA
0601: FTVMRLPVFY KQRDFLFYPP WAFALPAWLL KIPLSLIESG IWIGLTYYTI GFAPSAARFF RQLLAYFCVN QMALSLFRFL GAIGRTEVIS NSIGTFTLLI
0701: VFTLGGFIIA KDDIRPWMTW AYYMSPMMYG QTAIVMNEFL DERWSSPNYD TRINAKTVGE VLLKSRGFFT EPYWFWICIV ALLGFSLLFN LFYILALMYL
0801: NPLGNSKATV VEEGKDKQKG ENRGTEGSVV ELNSSSNKGP KRGMVLPFQP LSLAFNNVNY YVDMPSEMKA QGVEGDRLQL LRDVGGAFRP GILTALVGVS
0901: GAGKTTLMDV LAGRKTGGYI EGSISISGYP KNQTTFARVS GYCEQNDIHS PHVTVYESLI YSAWLRLSTD IDIKTRELFV EEVMELVELK PLRNSIVGLP
1001: GVDGLSTEQR KRLTIAVELV ANPSIIFMDE PTSGLDARAA AIVMRTVRNT VDTGRTVVCT IHQPSIDIFE SFDELLLMKR GGQVIYAGSL GHHSQKLVEY
1101: FEAVEGVPKI NDGYNPATWM LDVTTPSMES QMSLDFAQIF SNSSLYRRNQ ELIKDLSTPP PGSKDVYFKT KYAQSFSTQT KACFWKQYWS YWRHPQYNAI
1201: RFLMTVVIGV LFGLIFWQIG TKTENEQDLN NFFGAMYAAV LFLGALNAAT VQPAIAIERT VFYREKAAGM YSAIPYAISQ VAVEIMYNTI QTGVYTLILY
1301: SMIGCNWTMA KFLWFYYYML TSFIYFTLYG MMLMALTPNY QIAGICMSFF LSLWNLFSGF LIPRPQIPIW WRWYYWATPV AWTLYGLITS QVGDKDSMVH
1401: ISGIGDIDLK TLLKEGFGFE HDFLPVVAVV HIAWILLFLF VFAYGIKFLN FQRR

Arabidopsis Description

ABCG39ABC transporter G family member 39 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.