Factsheet for Solyc05g055330.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060396	Potato	plastid	95.47	95.47
CDY65389	Canola	cytosol	4.47	82.5
Solyc11g007280.1.1	Tomato	plastid	81.12	81.68
Solyc11g007300.1.1	Tomato	plastid	72.87	73.57
KRH34743	Soybean	plasma membrane	58.8	71.94
VIT_13s0074g00680.t01	Wine grape	plastid	71.79	71.88
CDX79673	Canola	cytosol, peroxisome, plasma membrane	59.07	71.5
Solyc11g067000.1.1	Tomato	extracellular, plastid	70.16	70.88
CDY43723	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	69.15	70.34
KRH71633	Soybean	nucleus	69.89	69.8
AT1G66950.1	Thale cress	plastid	68.54	69.67
AT2G36380.1	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	68.47	69.65
KRG92040	Soybean	extracellular	69.15	69.34
Bra023065.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	66.51	68.79
Os07t0522500-01	Rice	plasma membrane	21.31	63.38
TraesCS5A01G447200.1	Wheat	plasma membrane	52.64	62.54
GSMUA_Achr8P07660_001	Banana	mitochondrion, peroxisome, plasma membrane	65.43	62.51
Solyc12g019640.1.1	Tomato	plasma membrane	25.71	62.5
TraesCS5D01G023400.1	Wheat	plasma membrane	34.91	62.24
Solyc02g055530.2.1	Tomato	extracellular	2.44	62.07
Os02t0318500-00	Rice	plasma membrane	19.01	61.49
HORVU7Hr1G037750.8	Barley	cytosol, plasma membrane	46.21	61.48
Solyc12g098210.1.1	Tomato	plastid	59.2	61.4
HORVU5Hr1G124650.12	Barley	plasma membrane	31.46	61.26
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	58.46	61.19
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	59.07	60.84
TraesCS7A01G183900.1	Wheat	plasma membrane	56.43	60.43
TraesCS7D01G185700.2	Wheat	plasma membrane	53.92	60.42
TraesCS5A01G016200.1	Wheat	mitochondrion	58.66	60.42
KXG37059	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	57.37	60.4
TraesCS5B01G572600.1	Wheat	plastid	59.34	60.36
Solyc09g091660.2.1	Tomato	plastid	58.8	60.35
CDX84561	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	66.58	60.33
TraesCS4A01G331100.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	58.93	60.32
TraesCS5D01G564000.1	Wheat	plastid	59.07	60.0
TraesCS7B01G000200.1	Wheat	plastid	59.0	59.85
TraesCS7B01G088800.1	Wheat	plastid	58.59	59.68
TraesCS5B01G449500.1	Wheat	plastid	58.59	59.6
TraesCS5D01G452500.1	Wheat	plastid	58.39	59.48
Zm00001d021647_P003	Maize	plastid	58.12	59.41
TraesCS2B01G606700.2	Wheat	plastid	58.59	59.23
Solyc08g067620.2.1	Tomato	nucleus	58.05	59.05
KXG36359	Sorghum	plastid	58.05	58.89
Zm00001d025012_P003	Maize	plastid	58.12	58.48
Zm00001d009037_P003	Maize	plastid	57.71	58.23
TraesCS2D01G051800.1	Wheat	plasma membrane	55.07	58.14
HORVU5Hr1G106850.1	Barley	cytosol	58.46	57.75
Zm00001d034940_P003	Maize	plastid	57.78	57.32
Solyc05g018510.2.1	Tomato	cytosol, peroxisome, plasma membrane	53.72	55.88
Os11t0587600-01	Rice	plasma membrane	24.97	55.49
Solyc03g120980.2.1	Tomato	plastid	56.29	55.47
Solyc06g065670.2.1	Tomato	plasma membrane	51.08	53.62
Solyc06g076930.1.1	Tomato	nucleus	51.08	52.98
Solyc02g081870.2.1	Tomato	unclear	49.86	52.61
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	28.89	51.02
Solyc01g101070.2.1	Tomato	plastid	49.93	51.0
Bra017241.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	69.15	45.02
Os07t0522600-02	Rice	plasma membrane	0.14	0.31

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	UniProt:K4C2K9	InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005
PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF261
SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc05g055330.2	EnsemblPlants:Solyc05g055330.2.1	TMHMM:TMhelix	UniParc:UPI0002767085
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:+:65008983..65016404

Molecular Weight (calculated)

167548.0 Da

IEP (calculated)

8.191

GRAVY (calculated)

0.087

Length

1478 amino acids

Sequence
(BLAST)

0001: MSATISKDEL SKSLNRRSLS RSRRMSFGST SVRSWASASV TEVLTAPGGD VFQINGKEND DEDELKWAAI ERLPTYDRLR KGILKQTLDD GKIVHQEVDV
0101: MNLGFQDKKQ LMESILRIVE EDNERFLLRL RDRTDRVGID IPKIEVRYEH LSIEGDIYDG SRALPTLWNA TINFVEGALE KVKLVPSKKR VVKILHDVSG
0201: IVKPSRMILL LGPPGGGKTT LLKSLAGVPD KDLRVAGKIS YCGHELSDFI PQRTCAYISQ HDLHHGEMTV RETLDFAGRS LGVGTRYDLL TELSRREKEL
0301: GIKPDPEIDA FMKATAVAGQ ESSLVTDYVL KLLGLDICAD IVVGDQMRRG ISGGQKKRLT TGEMLVGPAK VFFMDEISTG LDSSTTFQII KYMRQMVHIM
0401: DVTMIISLLQ PAPETFELFD DIILLSEGRI VYQGPRENVL EFFESIGFKC PERKGIADFL QEVTSLKDQE QYWFRENKPY RFITVAEFAE LFSNFRVGRE
0501: LFDELEVAYD KSKAHPASLV TAKYGISNME LFKACLSREW LLIKRNSFLY MFKTFQITVM SIITFTVFFR TEMKAGQIAD GGKFYGALFF SLINVMFNGA
0601: AELALIIFRL PVFFKQRDSL FYPAWAFALP IWLLRIPLSF MESLIWVVLT YYTVGFAPAA SRFFRQFLVF FALHQMALSL FRFIAAIGRT LVVASTIGTF
0701: SLLIVFVLGG FIVAKDDLEP WIKWGYYASP MSYAQNAIAI NEFLDKRWST HNNDSSFSEE TVGKVLLKSR SMYTDDYMFW ICVIALFAFS FLFNFCFILA
0801: LTYLNPLADS KSVSMDDDKS KKNELSNFNP KESTEKSSVS TTATFKGIDM AIRNNSSIDK RAAKKRGMVL PFQPLSLAFK HVNYYVDMPA EMKAQGIEET
0901: RLQLLRDVSG AFRPGVLTAL VGVSGAGKTT LMDVLAGRKI GGYTDGSIII SGYPKNQSTF ARISGYCEQN DIHSPHVTVY ESLIYSAWLR LSQDVKKETR
1001: KNFVEEVMEL VELNPLRNCL VGLPGLDGLS TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRT VRNTVDTGRT VVCTIHQPSI DIFEAFDELL
1101: LMKRGGQVIY AGPLGHHSRL LIEYFQSVPG VPTLKEGYNP ATWMLDITTP AVEGQLNVDF GDIYTNSDLY RRNQELIKQL SVPVPGSQDL RFPTKYSQPF
1201: VDQCKACFWK QHLSYWRHPQ YNAIRFFMTA IIGIIFGIIF WDKGNKMYKL QDLLNLLGAM YSAVMFLGGT NTSTVQSVVA VERTVFYRER GAGMYSALPY
1301: AFAQVAIETI YIAIQTVIYS LILYSMIGFH WTAAKFFWFY FFVFMSFVYF TMYGMMLVAL TPSYPIAAIV MTFFLTLWNL FSGFLIPRPQ IPIWWRWYYW
1401: GSPVAWTIYG LVTSIVGDKN DNVEVPGIGE IPLKLFLKDN LGFEFDFLGV VAVAHVAWAV LFSCVFAYGI KFLNFQRR

Best Arabidopsis Sequence Match ( AT2G36380.1 )
(BLAST)

0001: MLGRDEDLVR TMSGRGSLGS TSHRSLAGAA SKSFRDVFAP PTDDVFGRSD RREEDDVELR WAALERLPTY DRLRKGMLPQ TMVNGKIGLE DVDVTNLAPK
0101: EKKHLMEMIL KFVEEDNEKF LRRLRERTDR VGIEVPKIEV RYENLSVEGD VRSASRALPT LFNVTLNTIE SILGLFHLLP SKKRKIEILK DISGIIKPSR
0201: MTLLLGPPSS GKTTLLQALA GKLDDTLQMS GRITYCGHEF REFVPQKTCA YISQHDLHFG EMTVRESLDF SGRCLGVGTR YQLLTELSRR EREAGIKPDP
0301: EIDAFMKSIA ISGQETSLVT DYVLKLLGLD ICADTLVGDV MRRGISGGQR KRLTTGEMLV GPATALFMDE ISTGLDSSTT FQICKFMRQL VHIADVTMVI
0401: SLLQPAPETF ELFDDIILLS EGQIVYQGSR DNVLEFFEYM GFKCPERKGI ADFLQEVTSK KDQEQYWNRR EHPYSYVSVH DFSSGFNSFH AGQQLASEFR
0501: VPYDKAKTHP AALVTQKYGI SNKDLFKACF DREWLLMKRN SFVYVFKTVQ ITIMSLIAMT VYFRTEMHVG TVQDGQKFYG ALFFSLINLM FNGMAELAFT
0601: VMRLPVFFKQ RDFLFYPPWA FALPGFLLKI PLSLIESVIW IALTYYTIGF APSAARFFRQ LLAYFCVNQM ALSLFRFLGA LGRTEVIANS GGTLALLVVF
0701: VLGGFIISKD DIPSWLTWCY YTSPMMYGQT ALVINEFLDE RWGSPNNDTR INAKTVGEVL LKSRGFFTEP YWFWICIGAL LGFTVLFNFC YIIALMYLNP
0801: LGNSKATTVV EEGKDKHKGS HSGTGGSVVE LTSTSSHGPK KGMVLPFQPL SLAFNNVNYY VDMPAEMKAQ GVEGDRLQLL RDVGGAFRPG VLTALVGVSG
0901: AGKTTLMDVL AGRKTGGYVE GSINISGYPK NQATFARVSG YCEQNDIHSP HVTVYESLIY SAWLRLSADI DTKTREMFVE EVMELVELKP LRNSIVGLPG
1001: VDGLSTEQRK RLTIAVELVA NPSIIFMDEP TSGLDARAAA IVMRTVRNTV DTGRTVVCTI HQPSIDIFES FDELLLMKRG GQVIYAGTLG HHSQKLVEYF
1101: EAIEGVPKIK DGYNPATWML DVTTPSMESQ MSVDFAQIFV NSSVNRRNQE LIKELSTPPP GSNDLYFRTK YAQPFSTQTK ACFWKMYWSN WRYPQYNAIR
1201: FLMTVVIGVL FGLLFWQTGT KIEKEQDLNN FFGAMYAAVL FLGATNAATV QPAVAIERTV FYREKAAGMY SAIPYAISQV AVEIMYNTIQ TGVYTLILYS
1301: MIGYDWTVVK FFWFYYYMLT CFVYFTLYGM MLVALTPNYQ IAGICLSFFL SFWNLFSGFL IPRPQIPIWW RWYYWASPVA WTLYGIITSQ VGDRDSIVHI
1401: TGVGDMSLKT LLKNGFGFDY DFLPVVAVVH IAWILIFLFA FAYGIKFLNF QRR

Arabidopsis Description

ABCG34ABC transporter G family member 34 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC87]
SUBAcon: [mitochondrion,peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.