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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 2
  • plasma membrane 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
nucleus: 21132161
endoplasmic reticulum: 27224218
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH34743 Soybean plasma membrane 60.88 74.59
KRG92040 Soybean extracellular 73.11 73.41
VIT_13s0074g00680.t01 Wine grape plastid 72.77 72.97
KRH67874 Soybean mitochondrion 30.61 72.48
PGSC0003DMT400050158 Potato cytosol, peroxisome, plasma membrane 68.99 70.61
PGSC0003DMT400060396 Potato plastid 70.27 70.37
Solyc11g007280.1.1 Tomato plastid 69.59 70.16
PGSC0003DMT400050166 Potato plastid 65.74 69.9
Solyc05g055330.2.1 Tomato plastid 69.8 69.89
Solyc11g007300.1.1 Tomato plastid 68.78 69.54
PGSC0003DMT400060117 Potato cytosol 46.28 67.49
KRH67876 Soybean plasma membrane 34.32 66.06
Os02t0318500-00 Rice plasma membrane 19.8 64.11
TraesCS5A01G447200.1 Wheat plasma membrane 52.5 62.46
GSMUA_Achr8P07660_001 Banana mitochondrion, peroxisome, plasma membrane 64.86 62.06
KRH09797 Soybean endoplasmic reticulum 59.59 61.81
HORVU7Hr1G037750.8 Barley cytosol, plasma membrane 46.08 61.39
KRH47506 Soybean endoplasmic reticulum 58.92 61.15
TraesCS5D01G023400.1 Wheat plasma membrane 34.19 61.04
KXG37059 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 57.84 60.97
Os07t0522500-01 Rice plasma membrane 20.47 60.97
KRH23522 Soybean mitochondrion 58.65 60.87
TraesCS7A01G183900.1 Wheat plasma membrane 56.55 60.65
KRH67471 Soybean endoplasmic reticulum 58.99 60.42
KRH52503 Soybean cytosol, peroxisome, plasma membrane 58.78 60.08
KRH16029 Soybean cytosol 58.65 59.99
TraesCS5A01G016200.1 Wheat mitochondrion 58.04 59.86
TraesCS7D01G185700.2 Wheat plasma membrane 53.31 59.82
HORVU5Hr1G124650.12 Barley plasma membrane 30.68 59.82
KRH61824 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 58.51 59.77
TraesCS5B01G572600.1 Wheat plastid 58.65 59.74
TraesCS4A01G331100.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane, plastid 58.24 59.7
KRG95762 Soybean mitochondrion 57.57 59.58
KRH05088 Soybean endoplasmic reticulum 58.18 59.5
TraesCS7B01G088800.1 Wheat plastid 58.18 59.34
TraesCS5B01G449500.1 Wheat plastid 58.04 59.12
TraesCS5D01G452500.1 Wheat plastid 57.91 59.06
Zm00001d021647_P003 Maize plastid 57.7 59.06
TraesCS5D01G564000.1 Wheat plastid 57.97 58.97
TraesCS7B01G000200.1 Wheat plastid 58.04 58.96
KXG36359 Sorghum plastid 57.97 58.89
TraesCS2B01G606700.2 Wheat plastid 57.97 58.69
Zm00001d025012_P003 Maize plastid 58.24 58.68
TraesCS2D01G051800.1 Wheat plasma membrane 55.47 58.64
Zm00001d009037_P003 Maize plastid 58.04 58.63
KRH47220 Soybean plasma membrane 37.09 57.73
Zm00001d034940_P003 Maize plastid 57.97 57.58
HORVU5Hr1G106850.1 Barley cytosol 58.04 57.42
Os11t0587600-01 Rice plasma membrane 25.47 56.69
KRH09795 Soybean endoplasmic reticulum 57.77 56.55
KRH23404 Soybean plasma membrane 55.74 55.48
KRG95752 Soybean cytosol, peroxisome, plasma membrane 56.55 51.96
KRH17029 Soybean cytosol, nucleus, plasma membrane 50.27 51.67
KRH02448 Soybean plasma membrane 49.32 50.28
Os07t0522600-02 Rice plasma membrane 0.07 0.16
Protein Annotations
EntrezGene:100788067MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1InterPro:ABCG_PDR_2
InterPro:ABC_2_transInterPro:ABC_trans_NInterPro:ABC_transporter-likeEMBL:ACUP02000919ncoils:CoilEnsemblPlantsGene:GLYMA_02G159900
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085UniProt:I1JFM7
InterPro:IPR003439EnsemblPlants:KRH71633ProteinID:KRH71633ProteinID:KRH71633.1InterPro:P-loop_NTPaseInterPro:PDR_assoc
PFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510PFscan:PS50893PANTHER:PTHR19241
PANTHER:PTHR19241:SF462SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI000295D7DASEG:seg
Description
hypothetical protein
Coordinates
chr2:-:17794585..17817213
Molecular Weight (calculated)
168274.0 Da
IEP (calculated)
7.395
GRAVY (calculated)
-0.008
Length
1480 amino acids
Sequence
(BLAST)
0001: MAKEEGGGEE IVGSMSEGRS FSSPRRSWAT ESFHEAVSGE SDAFHTCEKE IDEEEELKWE ALRRLPTYDR MRKGILKQVL ENGNVNYEEV DITKLGVQEK
0101: KHLLESILRT AEEDNESFLN RMRERIDRVA IEIPKIEVRF ENLSVEGDAY VGTRALPTLL NSTLNVIEGA LGYIKLLPHN KRVVKILQDI SGIVKPSRMT
0201: LLLGPPGSGK TTLLQALAGK TDKDLMASGR VTYCGHELSE FFPQRTCAYI SQHDLHHGEM TVRETLDFSG RCRGVGTRYN LLAELSRREL AAGIKPDPQI
0301: DAFMKATAME GQETSIVTDY ILKILGLEIC ADTLVGDEMK RGISGGQKKR LTTGEMLVGP AKAFFMDEIS TGLDSSTTFQ IVRFMRQMVH IMDVTMIISL
0401: LQPAPETYDL FDDIILLSEG KIVYQGPRES VLHFFRSVGF KCPERKGVAD FLQEVTSKKD QEQYWFRRDI PYQYVTVPEF VAHFNNYSIG QQLSEKIQVP
0501: YDPNESHRAA LVKEKYGLSK WELFKACFSR EWLLMKRNYF VYIFKTCQIT ILAIITMTVF FRTEMKHGQL EGAGKYYGAL FFSLINVMFN GVAELAMTIN
0601: RLPVFYKQRD FLFYPAWAFA LPIWVLRVPL SLLESGLWII LTYYTIGFAP AASRFFRQLL AFFCVNQMAL SLFRFIAAVG RIKVVASTLG SFTLLVVFVL
0701: SGFTVSRNDI EPWMIWCYYG SPMMYGQNAI AINEFLDKRW SAHNIDPRIP EPTVGKAFLR ARGIFTKDYW YWISVGALIG FSLLFNICFI LALTYLNPFG
0801: NSKSIIVEEE DQKKSTFGSS SVDKMATEAT TEKSSTSIAN SFEGIDMEVR NTAHGSNPKA EENTKSKKGM VLPFQPLSLV FQDVNYYINM PHEMKKQGIE
0901: ENRLQLLRDI SGAFRPGILT ALVGVSGAGK TTLMDVLAGR KTGGYIEGSI SISGYPKKQA TFPRISGYCE QNDIHSPNVT VYESLVFSAW LRLSNDVNKE
1001: TQKMFIEEIL ELVELHPVRH FIVGLPGISG LSTEQRKRLT IAVELVANPS IIFMDEPTTG LDARAAAVVM RTVRNTVDTG RTVVCTIHQP SIDIFENFDE
1101: LLLMKRGGQV IYGGPLGRNS QNLIEYFEAI AGVPKIKDGC NPATWMLEIS SPVVESQLNV DFAELYTKSD LYQKNQEVIK ELCTPVPGTK DLHFPSKYSQ
1201: SFVTQCKACF WKQNCSYWRN PQYNAIRFFT TIVIGIIFGL IYWDKGKKTQ KEQDLLNLLG AMYAAVFFLG ASNTNSVQPV VAIERTVLYR ERAAGMYSEL
1301: PYAIGQVAIE VIYVAIQSLA YTILLYWMIG FEPRVENFLW FYYFIFMCFM YFTLYGMMTV ALTPNYQIAA LVMSFFINFW NLFSGFVIPR TQIPIWWRWY
1401: YWGSPVAWTI YGLVTSQVGD KNSPIEVPGF RTMTVKDYLE RQFGFQHEFL GVVALTHVAF CLLFLLVFAY GIKFLNFQRR
Best Arabidopsis Sequence Match ( AT1G66950.1 )
(BLAST)
0001: MAAMLGRDED PVGALSGRVS LASTSHRSLV GASKSFRDVF MPQTDEVFGR SERREEDDME LRWAAIERLP TFDRLRKGML PQTSANGKIE LEDIDLTRLE
0101: PKDKKHLMEM ILSFVEEDNE KFLRDLRERT DRVGIEVPKI EVRYENISVE GDVRSASRAL PTLFNVTLNT LESILGFFHL LPSKRKKIQI LKDISGIVKP
0201: SRMTLLLGPP SSGKTTLLQA LAGKLDDTLQ MSGRITYCGH EFREFVPQKT CAYISQHDLH FGEMTVREIL DFSGRCLGVG SRYQLMSELS RREKEEGIKP
0301: DPKIDAFMKS IAISGQETSL VTDYVLKILG LDICADILAG DVMRRGISGG QKKRLTTGEM LVGPARALFM DEISTGLDSS TTFQICKFMR QLVHISDVTM
0401: IISLLQPAPE TFELFDDIIL LSEGQIVYQG PRDNVLEFFE YFGFQCPERK GVADFLQEVT SKKDQEQYWN KREQPYNYVS VSDFSSGFST FHTGQKLTSE
0501: FRVPYDKAKT HSAALVTQKY GISNWELFKA CFDREWLLMK RNSFVYVFKT VQITIMSLIT MTVYLRTEMH VGTVRDGQKF YGAMFFSLIN VMFNGLAELA
0601: FTVMRLPVFY KQRDFLFYPP WAFALPAWLL KIPLSLIESG IWIGLTYYTI GFAPSAARFF RQLLAYFCVN QMALSLFRFL GAIGRTEVIS NSIGTFTLLI
0701: VFTLGGFIIA KDDIRPWMTW AYYMSPMMYG QTAIVMNEFL DERWSSPNYD TRINAKTVGE VLLKSRGFFT EPYWFWICIV ALLGFSLLFN LFYILALMYL
0801: NPLGNSKATV VEEGKDKQKG ENRGTEGSVV ELNSSSNKGP KRGMVLPFQP LSLAFNNVNY YVDMPSEMKA QGVEGDRLQL LRDVGGAFRP GILTALVGVS
0901: GAGKTTLMDV LAGRKTGGYI EGSISISGYP KNQTTFARVS GYCEQNDIHS PHVTVYESLI YSAWLRLSTD IDIKTRELFV EEVMELVELK PLRNSIVGLP
1001: GVDGLSTEQR KRLTIAVELV ANPSIIFMDE PTSGLDARAA AIVMRTVRNT VDTGRTVVCT IHQPSIDIFE SFDELLLMKR GGQVIYAGSL GHHSQKLVEY
1101: FEAVEGVPKI NDGYNPATWM LDVTTPSMES QMSLDFAQIF SNSSLYRRNQ ELIKDLSTPP PGSKDVYFKT KYAQSFSTQT KACFWKQYWS YWRHPQYNAI
1201: RFLMTVVIGV LFGLIFWQIG TKTENEQDLN NFFGAMYAAV LFLGALNAAT VQPAIAIERT VFYREKAAGM YSAIPYAISQ VAVEIMYNTI QTGVYTLILY
1301: SMIGCNWTMA KFLWFYYYML TSFIYFTLYG MMLMALTPNY QIAGICMSFF LSLWNLFSGF LIPRPQIPIW WRWYYWATPV AWTLYGLITS QVGDKDSMVH
1401: ISGIGDIDLK TLLKEGFGFE HDFLPVVAVV HIAWILLFLF VFAYGIKFLN FQRR
Arabidopsis Description
ABCG39ABC transporter G family member 39 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC84]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.