Factsheet for Solyc11g067000.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117
extracellular: 29876421

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068277	Potato	cytosol	89.61	98.13
CDY65389	Canola	cytosol	4.37	80.0
VIT_06s0061g01490.t01	Wine grape	plastid	79.15	79.64
Solyc11g007300.1.1	Tomato	plastid	70.33	70.29
CDX79673	Canola	cytosol, peroxisome, plasma membrane	58.58	70.19
Solyc05g055330.2.1	Tomato	plastid	70.88	70.16
CDY43723	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	68.69	69.17
AT2G36380.1	Thale cress	cytosol, mitochondrion, peroxisome, plasma membrane	68.56	69.03
Solyc11g007280.1.1	Tomato	plastid	69.17	68.94
AT1G66950.1	Thale cress	plastid	67.33	67.74
Bra023065.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	66.1	67.67
Os07t0522500-01	Rice	plasma membrane	22.15	65.19
Os02t0318500-00	Rice	plasma membrane	20.1	64.33
TraesCS5D01G023400.1	Wheat	plasma membrane	35.95	63.45
TraesCS5A01G447200.1	Wheat	plasma membrane	53.93	63.42
GSMUA_Achr8P07660_001	Banana	mitochondrion, peroxisome, plasma membrane	65.14	61.6
HORVU5Hr1G124650.12	Barley	plasma membrane	31.85	61.4
TraesCS5A01G016200.1	Wheat	mitochondrion	60.22	61.39
HORVU7Hr1G037750.8	Barley	cytosol, plasma membrane	46.27	60.94
KXG37059	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	58.44	60.9
TraesCS7A01G183900.1	Wheat	plasma membrane	57.42	60.87
Zm00001d021647_P003	Maize	plastid	59.67	60.37
TraesCS5B01G572600.1	Wheat	plastid	59.95	60.36
Solyc02g055530.2.1	Tomato	extracellular	2.39	60.34
TraesCS5D01G452500.1	Wheat	plastid	59.74	60.23
TraesCS4A01G331100.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	59.4	60.18
KXG36359	Sorghum	plastid	59.88	60.12
Solyc12g019640.1.1	Tomato	plasma membrane	24.95	60.03
TraesCS5D01G564000.1	Wheat	plastid	59.67	60.0
Solyc12g098210.1.1	Tomato	plastid	58.44	60.0
TraesCS7B01G000200.1	Wheat	plastid	59.74	59.99
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	57.89	59.99
TraesCS7D01G185700.2	Wheat	plasma membrane	54.07	59.97
Solyc09g091660.2.1	Tomato	plastid	58.99	59.93
TraesCS5B01G449500.1	Wheat	plastid	59.26	59.67
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	58.44	59.58
TraesCS2D01G051800.1	Wheat	plasma membrane	56.94	59.5
CDX84561	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	66.23	59.41
TraesCS7B01G088800.1	Wheat	plastid	58.92	59.41
TraesCS2B01G606700.2	Wheat	plastid	58.99	59.03
Zm00001d009037_P003	Maize	plastid	59.06	58.98
Zm00001d025012_P003	Maize	plastid	59.06	58.82
Solyc08g067620.2.1	Tomato	nucleus	58.37	58.77
HORVU5Hr1G106850.1	Barley	cytosol	59.67	58.36
Zm00001d034940_P003	Maize	plastid	58.78	57.72
Os11t0587600-01	Rice	plasma membrane	25.63	56.39
Solyc05g018510.2.1	Tomato	cytosol, peroxisome, plasma membrane	54.68	56.3
Solyc03g120980.2.1	Tomato	plastid	57.35	55.93
Solyc06g065670.2.1	Tomato	plasma membrane	51.47	53.48
Solyc06g076930.1.1	Tomato	nucleus	51.06	52.42
Solyc02g081870.2.1	Tomato	unclear	49.69	51.89
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	29.25	51.13
Solyc01g101070.2.1	Tomato	plastid	50.24	50.79
Bra017241.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane	68.56	44.19
Os07t0522600-02	Rice	plasma membrane	0.07	0.16

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	UniProt:K4D9V7	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF429	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc11g067000.1	EnsemblPlants:Solyc11g067000.1.1	TMHMM:TMhelix
UniParc:UPI000276A2D4	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr11:-:52768509..52777596

Molecular Weight (calculated)

166411.0 Da

IEP (calculated)

7.660

GRAVY (calculated)

0.065

Length

1463 amino acids

Sequence
(BLAST)

0001: MEGAFVGNEL ARLRSSNSRG TSWRSSQSIM EVLGGQRDDF FMKNYSTRWR EMAEEEEKEL KWAAIDRLPT YDRMRKGMMK EVIGNGRVVH HEVDMTNLGN
0101: QDRKVLMESI LKVVEDDNEK FLRRLRNRTD RVGIEIPKIE VRFENLSVEG DAYVGTRALP TLLNSTLNTM EAVLGLINLS PSKKKVVKIL EDVSGIIRPS
0201: RMTLLLGPPG SGKTTLLKAL AGKSEDGLRV TGKITYCGHE FHEFVPQRTS AYISQHDLHH GEMTVRETLD FAGRCLGVGT RYDLLVELSR REKEAGIMPD
0301: PQIDAFMKAT AMEGLETSLI TDYVLKILGL DICADIMVGD DMRRGISGGQ KKRVTTGEML VGPAKAFFMD EISKGLDSST TYQIVKFMRQ MVHVNDITMV
0401: ISLLQPDPET FELFDDVILL SEGQIVYQGP KENVLEFFEY MGFRCPERKG IADFLVEVTS KKDQEQYWFR NSRPYVYISV PEFAESFNSF QIGEQIIIEL
0501: TIPYDKFSVH RAALVKNKYG ISNLELFKAC FSREWLLMKR SSFLYIFKTT QITIMATIAL TVFLRTQMKA GNVKDSAKFW GALFFSLINV MFNGMQELAM
0601: TVFRLPVFFK QRDSLFYPAW AFALPIWVLK IPISLVESSI WIILTYYTIG FAPAASRFFK QLLAFVGVHQ MALSLFRFIA AAGRTQVVAN TLGTFTLLLV
0701: FILGGFIVSK DDIQDWMIWG YYLSPMMYGQ NAIAINEFLD DRWSAPTNGS QPTVGKTLLH DRGLFTTETW YWICIAALFG FSLLFNVLFI AALTFLNPLG
0801: DIKSVSVEDD DKNNSSPQEK RKVGGIQMAA TCSQVNTSCV VPLPIKESRK RMVLPFKPLS LAFNHVNYYV DMPAEMKTQG IEEDRLQLLR DVSGVFRPGI
0901: LTALVGVSGA GKTTLMDVLA GRKTGGYIEG SIKISGYPKN QTTFARVSGY CEQNDIHSPY VTIYESLLYS AWLRLPSDVK TEIREMFVEE VMELVELKPL
1001: RNALVGLPGI NGLSTEQRKR LTTAVELVAN PSIIFMDEPT SGLDARAAAI VMRTVRKTVD TGRTVVCTIH QPSIDIFEAF DELLLMKRGG QVIYAGPLGA
1101: RSQTMVEYFE AIRGVPKIRE CDNPATWMLD VSSSSMEAKL DVDFAEVYAK SDLYQRNQLL IKELSTPAPR SEDLYFPTQY SQSFLTQCKA CFWKQNWSYW
1201: RNSQYNAIRF FMTVIIGIMF GVIFWDKGNK IYRQQDLLNL LGATYAAVMF LGATNASAVQ SVVAVERTVF YRERAAGMYS ELPYAFAQVA IETIYVAVQT
1301: FIYSLLLFSM IGYEWTAAKF FYFYYFIFMC FTYFSMYGMM VVALTPGYQI AAIVMSFFLS FWNLFSGFLV PRPLIPVWWR WYYWGSPVAW TIYGIFASQV
1401: GDRIDELEIP GVTVKMQVNQ FMKEYLGYDH DFLVAVVFAH VGWVLLFFFV FAYGIKFLNH QKR

Best Arabidopsis Sequence Match ( AT2G36380.1 )
(BLAST)

0001: MLGRDEDLVR TMSGRGSLGS TSHRSLAGAA SKSFRDVFAP PTDDVFGRSD RREEDDVELR WAALERLPTY DRLRKGMLPQ TMVNGKIGLE DVDVTNLAPK
0101: EKKHLMEMIL KFVEEDNEKF LRRLRERTDR VGIEVPKIEV RYENLSVEGD VRSASRALPT LFNVTLNTIE SILGLFHLLP SKKRKIEILK DISGIIKPSR
0201: MTLLLGPPSS GKTTLLQALA GKLDDTLQMS GRITYCGHEF REFVPQKTCA YISQHDLHFG EMTVRESLDF SGRCLGVGTR YQLLTELSRR EREAGIKPDP
0301: EIDAFMKSIA ISGQETSLVT DYVLKLLGLD ICADTLVGDV MRRGISGGQR KRLTTGEMLV GPATALFMDE ISTGLDSSTT FQICKFMRQL VHIADVTMVI
0401: SLLQPAPETF ELFDDIILLS EGQIVYQGSR DNVLEFFEYM GFKCPERKGI ADFLQEVTSK KDQEQYWNRR EHPYSYVSVH DFSSGFNSFH AGQQLASEFR
0501: VPYDKAKTHP AALVTQKYGI SNKDLFKACF DREWLLMKRN SFVYVFKTVQ ITIMSLIAMT VYFRTEMHVG TVQDGQKFYG ALFFSLINLM FNGMAELAFT
0601: VMRLPVFFKQ RDFLFYPPWA FALPGFLLKI PLSLIESVIW IALTYYTIGF APSAARFFRQ LLAYFCVNQM ALSLFRFLGA LGRTEVIANS GGTLALLVVF
0701: VLGGFIISKD DIPSWLTWCY YTSPMMYGQT ALVINEFLDE RWGSPNNDTR INAKTVGEVL LKSRGFFTEP YWFWICIGAL LGFTVLFNFC YIIALMYLNP
0801: LGNSKATTVV EEGKDKHKGS HSGTGGSVVE LTSTSSHGPK KGMVLPFQPL SLAFNNVNYY VDMPAEMKAQ GVEGDRLQLL RDVGGAFRPG VLTALVGVSG
0901: AGKTTLMDVL AGRKTGGYVE GSINISGYPK NQATFARVSG YCEQNDIHSP HVTVYESLIY SAWLRLSADI DTKTREMFVE EVMELVELKP LRNSIVGLPG
1001: VDGLSTEQRK RLTIAVELVA NPSIIFMDEP TSGLDARAAA IVMRTVRNTV DTGRTVVCTI HQPSIDIFES FDELLLMKRG GQVIYAGTLG HHSQKLVEYF
1101: EAIEGVPKIK DGYNPATWML DVTTPSMESQ MSVDFAQIFV NSSVNRRNQE LIKELSTPPP GSNDLYFRTK YAQPFSTQTK ACFWKMYWSN WRYPQYNAIR
1201: FLMTVVIGVL FGLLFWQTGT KIEKEQDLNN FFGAMYAAVL FLGATNAATV QPAVAIERTV FYREKAAGMY SAIPYAISQV AVEIMYNTIQ TGVYTLILYS
1301: MIGYDWTVVK FFWFYYYMLT CFVYFTLYGM MLVALTPNYQ IAGICLSFFL SFWNLFSGFL IPRPQIPIWW RWYYWASPVA WTLYGIITSQ VGDRDSIVHI
1401: TGVGDMSLKT LLKNGFGFDY DFLPVVAVVH IAWILIFLFA FAYGIKFLNF QRR

Arabidopsis Description

ABCG34ABC transporter G family member 34 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC87]
SUBAcon: [mitochondrion,peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.