Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 2
- plasma membrane 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
25464976
unclear: 26455813 |
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g055530.2.1 | Tomato | extracellular | 4.0 | 98.28 |
| Solyc02g081870.2.1 | Tomato | unclear | 76.7 | 78.02 |
| VIT_06s0004g06560.t01 | Wine grape | mitochondrion, plasma membrane | 66.11 | 74.0 |
| Bra021598.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 72.21 | 72.01 |
| CDY29713 | Canola | cytosol, peroxisome, plasma membrane | 72.21 | 72.01 |
| KRH17029 | Soybean | cytosol, nucleus, plasma membrane | 72.7 | 71.94 |
| CDX97864 | Canola | cytosol, peroxisome, plasma membrane | 72.14 | 71.94 |
| CDX83314 | Canola | cytosol | 71.44 | 71.64 |
| CDX95741 | Canola | cytosol | 71.3 | 71.5 |
| AT2G29940.1 | Thale cress | cytosol, peroxisome, plasma membrane | 71.51 | 71.46 |
| Bra000469.1-P | Field mustard | cytosol | 70.39 | 71.44 |
| OQU81756 | Sorghum | plasma membrane | 59.51 | 67.46 |
| TraesCS7A01G074500.3 | Wheat | plasma membrane | 59.44 | 67.44 |
| TraesCS7D01G069500.1 | Wheat | cytosol, peroxisome, plasma membrane | 64.7 | 65.76 |
| HORVU7Hr1G016870.2 | Barley | cytosol | 63.72 | 65.23 |
| Zm00001d003354_P002 | Maize | cytosol, peroxisome, plasma membrane | 64.84 | 64.48 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 62.25 | 61.09 |
| Solyc12g019640.1.1 | Tomato | plasma membrane | 24.42 | 57.24 |
| CDX71718 | Canola | cytosol | 2.11 | 53.57 |
| Solyc08g067620.2.1 | Tomato | nucleus | 54.11 | 53.06 |
| Solyc05g053590.2.1 | Tomato | cytosol, mitochondrion, peroxisome, plasma membrane | 52.07 | 52.55 |
| Solyc12g098210.1.1 | Tomato | plastid | 52.42 | 52.42 |
| Solyc03g120980.2.1 | Tomato | plastid | 54.67 | 51.93 |
| Solyc09g091660.2.1 | Tomato | plastid | 52.35 | 51.81 |
| Solyc12g100180.1.1 | Tomato | mitochondrion, nucleus, plasma membrane, plastid | 51.93 | 51.57 |
| Solyc11g007280.1.1 | Tomato | plastid | 53.12 | 51.57 |
| Solyc05g018510.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 51.23 | 51.37 |
| Solyc11g007300.1.1 | Tomato | plastid | 52.77 | 51.37 |
| Solyc05g055330.2.1 | Tomato | plastid | 52.98 | 51.08 |
| Solyc11g067000.1.1 | Tomato | extracellular, plastid | 52.42 | 51.06 |
| Solyc06g065670.2.1 | Tomato | plasma membrane | 47.86 | 48.44 |
| Solyc01g101070.2.1 | Tomato | plastid | 48.77 | 48.03 |
| Solyc12g019620.1.1 | Tomato | cytosol, nucleus, plasma membrane | 25.75 | 43.85 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 | InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans |
| InterPro:ABC_trans_N | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 |
| GO:GO:0055085 | InterPro:IPR003439 | UniProt:K4CA51 | InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 |
| PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF224 |
| SMART:SM00382 | SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc06g076930.1 | EnsemblPlants:Solyc06g076930.1.1 | TMHMM:TMhelix | UniParc:UPI000276558A |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:47805138..47817821
Molecular Weight (calculated)
159541.0 Da
IEP (calculated)
8.511
GRAVY (calculated)
0.078
Length
1425 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAASNGSEFF DLDVEAQNES FGRRSNAESV EEDENELMWA ALEKLPTRKR TNFALVKRNE TDSSVGKTHD TVDVRNLDRN TRQLVVNRAM ATTAQDNYKL
0101: LAGVKERLDS VGLEVPKVEV RYENITLTAN VNVGSRALPT LVNSVRDVIE SILTGLRIFR PKRSSLTILN DVSGVVKPGR MTLLLGPPGS GKTSLLLALS
0201: GKLDNSLKKK GIITYNGHKL DEFCVQRTSA YISQTDNHIA ELTVRETVDF AARCQGASQG FGEYMKDLDR LEKEKNIRPN SEIDAYMKAS SVGGKKHSVS
0301: TDYVLKVLGL DVCSDTIVGN DMIRGVSGGQ RKRVTTGEMI VGPRKTLFMD EISTGLDSST TYQIVKCLRN FVHLMDATLM IALLQPAPET FELFDDLVLL
0401: SEGYVVYHGP QADVIEFFES LGFRLPPRKG VADFLQEVTS RKDQAQYWAD NSRPYEFIPV HAIAEAFRNS RYGQDIKSFL STPYDRSKGH PSALSTTKYA
0501: IPRWDLFKAC FEREWLLMTR HSFLYIFRTF QVAFVGFVTC TMFLKTRIHP TDLMNGNLYL SCLFFGLIHM MFNGFSELPL LIFRLPVFYK QRDNMFYPAW
0601: SWSLCSWILR LPYSVIEAVV WSFVVYWSVG FSPGAGRFFR YMFTLFVVHQ MGMGLFRSIA SIARVLVVSN TFASAALLIT FLSGGFIVPK DMIKPWWEWA
0701: FWISPLTYGQ RAISVNEFTS TRWTQKITIG NVTLGNAVLR SHSLPTANSW YWLGVGVLLI YILFFNAILT LALAILNPIR KSGAVVSPEA VGADGGSKTS
0801: ESNGDPEPAM TKKKGMILPF QPLAMTFHNV KYFVDMPKEM SSEGISEKKL QLLSSVSGVF SPGVLTALVG SSGAGKTTLM DCLAGRKTSG YIEGDIKISG
0901: YLKQQQTFAR VSGYVEQNDI HSPQVTVYES LCFSSYLRLP KEVNKEQREE FVKEVMDLVE LDSLKNALVG LPGSSGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIEI FEAFDELLLM KRGGQVIYGG KLGEKSQTMV DYFQSIPGIP PIPSGYNPAT WMLEISTPAA
1101: EERMGEDFAV IYRNSEQFRG VEALIKQLSV PPENSEPLKF TSIYSQGAFS QFRICLWKQN LVYWRSPTYN AVRLFFTTLS ALILGSIFWD VGSKRDSTQN
1201: LFVVMGALYS SCLFLGVNNA SSVQPIVAIE RTVFYREKAA GMYSPLPYAA AQGLVEVPYI FMQTLLFGII SYLMINFERT AEKFILYLVF MFLTFSYFTF
1301: YGMMAVGLTP TPHLAAVISS AFYSLWNLMS GFLVPKPSIP GWWIWFYYIS PVAWTLRGII SSQLGDVEEI ITGTGFQGTV KEYLEVSLGF GPGWIGWSAL
1401: ILIGFCLLFF TVFALSVKVL NFQKR
0101: LAGVKERLDS VGLEVPKVEV RYENITLTAN VNVGSRALPT LVNSVRDVIE SILTGLRIFR PKRSSLTILN DVSGVVKPGR MTLLLGPPGS GKTSLLLALS
0201: GKLDNSLKKK GIITYNGHKL DEFCVQRTSA YISQTDNHIA ELTVRETVDF AARCQGASQG FGEYMKDLDR LEKEKNIRPN SEIDAYMKAS SVGGKKHSVS
0301: TDYVLKVLGL DVCSDTIVGN DMIRGVSGGQ RKRVTTGEMI VGPRKTLFMD EISTGLDSST TYQIVKCLRN FVHLMDATLM IALLQPAPET FELFDDLVLL
0401: SEGYVVYHGP QADVIEFFES LGFRLPPRKG VADFLQEVTS RKDQAQYWAD NSRPYEFIPV HAIAEAFRNS RYGQDIKSFL STPYDRSKGH PSALSTTKYA
0501: IPRWDLFKAC FEREWLLMTR HSFLYIFRTF QVAFVGFVTC TMFLKTRIHP TDLMNGNLYL SCLFFGLIHM MFNGFSELPL LIFRLPVFYK QRDNMFYPAW
0601: SWSLCSWILR LPYSVIEAVV WSFVVYWSVG FSPGAGRFFR YMFTLFVVHQ MGMGLFRSIA SIARVLVVSN TFASAALLIT FLSGGFIVPK DMIKPWWEWA
0701: FWISPLTYGQ RAISVNEFTS TRWTQKITIG NVTLGNAVLR SHSLPTANSW YWLGVGVLLI YILFFNAILT LALAILNPIR KSGAVVSPEA VGADGGSKTS
0801: ESNGDPEPAM TKKKGMILPF QPLAMTFHNV KYFVDMPKEM SSEGISEKKL QLLSSVSGVF SPGVLTALVG SSGAGKTTLM DCLAGRKTSG YIEGDIKISG
0901: YLKQQQTFAR VSGYVEQNDI HSPQVTVYES LCFSSYLRLP KEVNKEQREE FVKEVMDLVE LDSLKNALVG LPGSSGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIEI FEAFDELLLM KRGGQVIYGG KLGEKSQTMV DYFQSIPGIP PIPSGYNPAT WMLEISTPAA
1101: EERMGEDFAV IYRNSEQFRG VEALIKQLSV PPENSEPLKF TSIYSQGAFS QFRICLWKQN LVYWRSPTYN AVRLFFTTLS ALILGSIFWD VGSKRDSTQN
1201: LFVVMGALYS SCLFLGVNNA SSVQPIVAIE RTVFYREKAA GMYSPLPYAA AQGLVEVPYI FMQTLLFGII SYLMINFERT AEKFILYLVF MFLTFSYFTF
1301: YGMMAVGLTP TPHLAAVISS AFYSLWNLMS GFLVPKPSIP GWWIWFYYIS PVAWTLRGII SSQLGDVEEI ITGTGFQGTV KEYLEVSLGF GPGWIGWSAL
1401: ILIGFCLLFF TVFALSVKVL NFQKR
0001: MAAASNGSEY FEFDVETGRE SFARPSNAET VEQDEEDLRW AAIGRLPSQR QGTHNAILRR SQTQTQTSGY ADGNVVQTID VKKLDRADRE MLVRQALATS
0101: DQDNFKLLSA IKERLDRVGM EVPKIEVRFE NLNIEADVQA GTRALPTLVN VSRDFFERCL SSLRIIKPRK HKLNILKDIS GIIKPGRMTL LLGPPGSGKS
0201: TLLLALAGKL DKSLKKTGNI TYNGENLNKF HVKRTSAYIS QTDNHIAELT VRETLDFAAR CQGASEGFAG YMKDLTRLEK ERGIRPSSEI DAFMKAASVK
0301: GEKHSVSTDY VLKVLGLDVC SDTMVGNDMM RGVSGGQRKR VTTGEMTVGP RKTLFMDEIS TGLDSSTTFQ IVKCIRNFVH LMDATVLMAL LQPAPETFDL
0401: FDDLILLSEG YMVYQGPRED VIAFFESLGF RLPPRKGVAD FLQEVTSKKD QAQYWADPSK PYQFIPVSDI AAAFRNSKYG HAADSKLAAP FDKKSADPSA
0501: LCRTKFAISG WENLKVCFVR ELLLIKRHKF LYTFRTCQVG FVGLVTATVF LKTRLHPTSE QFGNEYLSCL FFGLVHMMFN GFSELPLMIS RLPVFYKQRD
0601: NSFHPAWSWS IASWLLRVPY SVLEAVVWSG VVYFTVGLAP SAGRFFRYML LLFSVHQMAL GLFRMMASLA RDMVIANTFG SAAILIVFLL GGFVIPKADI
0701: KPWWVWGFWV SPLSYGQRAI AVNEFTATRW MTPSAISDTT IGLNLLKLRS FPTNDYWYWI GIAVLIGYAI LFNNVVTLAL AYLNPLRKAR AVVLDDPNEE
0801: TALVADANQV ISEKKGMILP FKPLTMTFHN VNYYVDMPKE MRSQGVPETR LQLLSNVSGV FSPGVLTALV GSSGAGKTTL MDVLAGRKTG GYTEGDIRIS
0901: GHPKEQQTFA RISGYVEQND IHSPQVTVEE SLWFSASLRL PKEITKEQKK EFVEQVMRLV ELDTLRYALV GLPGTTGLST EQRKRLTIAV ELVANPSIIF
1001: MDEPTSGLDA RAAAIVMRTV RNTVDTGRTV VCTIHQPSID IFEAFDELLL MKRGGQVIYG GKLGTHSQVL VDYFQGINGV PPISSGYNPA TWMLEVTTPA
1101: LEEKYNMEFA DLYKKSDQFR EVEANIKQLS VPPEGSEPIS FTSRYSQNQL SQFLLCLWKQ NLVYWRSPEY NLVRLVFTTI AAFILGTVFW DIGSKRTSSQ
1201: DLITVMGALY SACLFLGVSN ASSVQPIVSI ERTVFYREKA AGMYAPIPYA AAQGLVEIPY ILTQTILYGV ITYFTIGFER TFSKFVLYLV FMFLTFTYFT
1301: FYGMMAVGLT PNQHLAAVIS SAFYSLWNLL SGFLVQKPLI PVWWIWFYYI CPVAWTLQGV ILSQLGDVES MINEPLFHGT VKEFIEYYFG YKPNMIGVSA
1401: AVLVGFCALF FSAFALSVKY LNFQRR
0101: DQDNFKLLSA IKERLDRVGM EVPKIEVRFE NLNIEADVQA GTRALPTLVN VSRDFFERCL SSLRIIKPRK HKLNILKDIS GIIKPGRMTL LLGPPGSGKS
0201: TLLLALAGKL DKSLKKTGNI TYNGENLNKF HVKRTSAYIS QTDNHIAELT VRETLDFAAR CQGASEGFAG YMKDLTRLEK ERGIRPSSEI DAFMKAASVK
0301: GEKHSVSTDY VLKVLGLDVC SDTMVGNDMM RGVSGGQRKR VTTGEMTVGP RKTLFMDEIS TGLDSSTTFQ IVKCIRNFVH LMDATVLMAL LQPAPETFDL
0401: FDDLILLSEG YMVYQGPRED VIAFFESLGF RLPPRKGVAD FLQEVTSKKD QAQYWADPSK PYQFIPVSDI AAAFRNSKYG HAADSKLAAP FDKKSADPSA
0501: LCRTKFAISG WENLKVCFVR ELLLIKRHKF LYTFRTCQVG FVGLVTATVF LKTRLHPTSE QFGNEYLSCL FFGLVHMMFN GFSELPLMIS RLPVFYKQRD
0601: NSFHPAWSWS IASWLLRVPY SVLEAVVWSG VVYFTVGLAP SAGRFFRYML LLFSVHQMAL GLFRMMASLA RDMVIANTFG SAAILIVFLL GGFVIPKADI
0701: KPWWVWGFWV SPLSYGQRAI AVNEFTATRW MTPSAISDTT IGLNLLKLRS FPTNDYWYWI GIAVLIGYAI LFNNVVTLAL AYLNPLRKAR AVVLDDPNEE
0801: TALVADANQV ISEKKGMILP FKPLTMTFHN VNYYVDMPKE MRSQGVPETR LQLLSNVSGV FSPGVLTALV GSSGAGKTTL MDVLAGRKTG GYTEGDIRIS
0901: GHPKEQQTFA RISGYVEQND IHSPQVTVEE SLWFSASLRL PKEITKEQKK EFVEQVMRLV ELDTLRYALV GLPGTTGLST EQRKRLTIAV ELVANPSIIF
1001: MDEPTSGLDA RAAAIVMRTV RNTVDTGRTV VCTIHQPSID IFEAFDELLL MKRGGQVIYG GKLGTHSQVL VDYFQGINGV PPISSGYNPA TWMLEVTTPA
1101: LEEKYNMEFA DLYKKSDQFR EVEANIKQLS VPPEGSEPIS FTSRYSQNQL SQFLLCLWKQ NLVYWRSPEY NLVRLVFTTI AAFILGTVFW DIGSKRTSSQ
1201: DLITVMGALY SACLFLGVSN ASSVQPIVSI ERTVFYREKA AGMYAPIPYA AAQGLVEIPY ILTQTILYGV ITYFTIGFER TFSKFVLYLV FMFLTFTYFT
1301: FYGMMAVGLT PNQHLAAVIS SAFYSLWNLL SGFLVQKPLI PVWWIWFYYI CPVAWTLQGV ILSQLGDVES MINEPLFHGT VKEFIEYYFG YKPNMIGVSA
1401: AVLVGFCALF FSAFALSVKY LNFQRR
Arabidopsis Description
ABCG31ABC transporter G family member 31 [Source:UniProtKB/Swiss-Prot;Acc:Q7PC88]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.