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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • plasma membrane 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400067210 Potato plasma membrane 97.8 97.87
Solyc05g018510.2.1 Tomato cytosol, peroxisome, plasma membrane 70.03 69.39
EES00201 Sorghum plasma membrane 68.82 67.95
Os01t0177900-01 Rice plasma membrane 68.61 67.74
HORVU3Hr1G022800.1 Barley plasma membrane 68.54 67.44
TraesCS3B01G141700.2 Wheat golgi, unclear 68.54 67.44
TraesCS3A01G122500.2 Wheat plasma membrane 68.54 67.44
TraesCS3D01G124400.2 Wheat plasma membrane 68.39 65.69
Solyc02g055530.2.1 Tomato extracellular 2.63 63.79
Zm00001d039631_P002 Maize plasma membrane 66.05 62.25
Solyc12g019640.1.1 Tomato plasma membrane 26.63 61.68
GSMUA_Achr7P08510_001 Banana plasma membrane 68.61 60.83
Solyc05g053590.2.1 Tomato cytosol, mitochondrion, peroxisome, plasma membrane 57.17 57.01
Solyc08g067620.2.1 Tomato nucleus 58.52 56.71
Solyc12g100180.1.1 Tomato mitochondrion, nucleus, plasma membrane, plastid 57.53 56.45
Solyc09g091660.2.1 Tomato plastid 57.53 56.25
Solyc12g098210.1.1 Tomato plastid 56.39 55.72
Solyc11g007300.1.1 Tomato plastid 54.76 52.66
Solyc11g007280.1.1 Tomato plastid 54.76 52.52
Solyc03g120980.2.1 Tomato plastid 55.11 51.73
Solyc11g067000.1.1 Tomato extracellular, plastid 53.48 51.47
Solyc05g055330.2.1 Tomato plastid 53.62 51.08
Solyc02g081870.2.1 Tomato unclear 48.79 49.04
Solyc01g101070.2.1 Tomato plastid 49.43 48.1
Solyc06g076930.1.1 Tomato nucleus 48.44 47.86
Solyc12g019620.1.1 Tomato cytosol, nucleus, plasma membrane 28.2 47.43
Protein Annotations
MapMan:21.9.4.3MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1InterPro:ABCG_PDR_2
InterPro:ABC_2_transInterPro:ABC_trans_NInterPro:ABC_transporter-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085InterPro:IPR003439UniProt:K4C7J6InterPro:P-loop_NTPaseInterPro:PDR_assoc
PFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510PFscan:PS50893PANTHER:PTHR19241
PANTHER:PTHR19241:SF280SMART:SM00382SUPFAM:SSF52540EnsemblPlantsGene:Solyc06g065670.2EnsemblPlants:Solyc06g065670.2.1TMHMM:TMhelix
UniParc:UPI000276598DSEG:seg::::
Description
No Description!
Coordinates
chr6:-:41069993..41078201
Molecular Weight (calculated)
159818.0 Da
IEP (calculated)
8.616
GRAVY (calculated)
0.132
Length
1408 amino acids
Sequence
(BLAST)
0001: MSTRGENGAN KNEEDLVLAA LQRSPTYIRA RTSIFRGIGG EVALVDVGKM KGEEQMQVLD GLINAINEDT ELFFKRVKER FEKVDLEFPK VKVCFHHLKV
0101: DAMVHVGSRA LPTIPNFIFN MTESSLRQLR IFPSRRKKLS ILNNISGFLR PSRLTLLLGP PSSGKTTLLL ALAGRLDKNL MISGRVTYNG HDLKEFVPQR
0201: TAAYVSQRDS HIAEMTVRET LEFSGRCQGV GFKQDLLMEL LRRETNAGII PDQDIDIFIK AVALGEQTSI VVDYILKILG LDICADTLVG DEMLKGISGG
0301: QKKRLTTGEL LMGAPRVLLM DEISTGLDSS TTFQIIKYLK YTTCAFDGTT LVSLLQPDPE TYSLFDDIIL LSEGQIIYQG PRETALEFFK FMGFKCPSRK
0401: NVADFLQELT SEKDQGQYWF LNSQYSYVSA TKFAEGFQSF HVGNALAQEL AIPFDKRDGH PAALSSSTYG VKKSELLKIS FDWQLLLLKR NSAVLVFKVT
0501: QLFLIILIMM SVFFRSTMHH DTLEDGAVYL GALYFAILMV LFNGFLEVPM LIAKLPVLYK QRDLHFYPCW IYTLPSWLLS IPTSLLESII WVAATYYVVG
0601: FDPQITRCFR QFLLYFSLHQ MSIGLFRVMA SLGRNMIVAN TFGSFAMLVV MALGGFVISR DSIPSWWIWG YWFSPLMYAQ NSASVNEFRG HSWDKRFRDN
0701: ISLGQMLLKV RSLFPENYWY WIGVGALIGY IIVFNVLFTI FLTYLNPLGS QQAVVSKKNT QNKDKEHESE DNIVPFGEFL NHSHSFTGRE IKKRRGMVLP
0801: FEPLSMCFKE ISYYVDVPME LKLQGLVGDK LQLLVNVTGA FRPGVLTALV GVSGAGKTTL MDVLAGRKTG GHITGNIYIS GHPKKQETFA RVSGYCEQND
0901: VHSPCLTIHE SLLFSAWLRL SSQVDVKTQK AFVEEVMELV ELTSLRGALV GLPGVDGLST EQRKRLTIAV ELVANPSIVF MDEPTSGLDA RSAAIVMRTV
1001: RNIVDTGRTI VCTIHQPSID IFESFDELLL MKRGGQLIYA GSLGNRSCKL IQYFEEIQGV HRIRSGQNPA AWVLEVTSSA EENRLGVDFA DIYRKSALFQ
1101: QNEEMVESLS KPQEGSAELY FSSKYSQSFF GQFLACLWKQ NLSYWRNPQY TAVRFFYTVI ISLMFGSICW KFGSKRSTQQ DILNAMGSMY AAVLFIGITN
1201: ASSVQPVVFI ERFVSYRERA AGMYSALPFA FAQVTIEFPY VFIQTLIYSA IFYFMASFEW NIWKFVWYIY FMYFTLLYFT LFGMMTTSVS PNHNIAAILA
1301: APFYMMWNLF SGFMISRMRI PIYWRWYYWA NPVAWSLYGL LTSQYGEVNE HLTLADGVHT VSIKRFIKEQ FGYRQEFLGT AGVAVIGFCI IFAVTFAFAI
1401: KFFNFQRR
Best Arabidopsis Sequence Match ( AT2G26910.1 )
(BLAST)
0001: MWNSAENAFS RSTSFKDEIE DEEELRWAAL QRLPTYSRIR RGIFRDMVGE PKEIQIGNLE ASEQRLLLDR LVNSVENDPE QFFARVRKRF DAVDLKFPKI
0101: EVRFQNLMVE SFVHVGSRAL PTIPNFIINM AEGLLRNIHV IGGKRNKLTI LDGISGVIRP SRLTLLLGPP SSGKTTLLLA LAGRLGTNLQ TSGKITYNGY
0201: DLKEIIAPRT SAYVSQQDWH VAEMTVRQTL EFAGRCQGVG FKYDMLLELA RREKLAGIVP DEDLDIFMKS LALGGMETSL VVEYVMKILG LDTCADTLVG
0301: DEMIKGISGG QKKRLTTGEL LVGPARVLFM DEISNGLDSS TTHQIIMYMR HSTHALEGTT VISLLQPSPE TYELFDDVIL MSEGQIIYQG PRDEVLDFFS
0401: SLGFTCPDRK NVADFLQEVT SKKDQQQYWS VPFRPYRYVP PGKFAEAFRS YPTGKKLAKK LEVPFDKRFN HSAALSTSQY GVKKSELLKI NFAWQKQLMK
0501: QNAFIYVFKF VQLLLVALIT MTVFCRTTMH HNTIDDGNIY LGSLYFSMVI ILFNGFTEVP MLVAKLPVLY KHRDLHFYPS WAYTLPSWLL SIPTSIIESA
0601: TWVAVTYYTI GYDPLFSRFL QQFLLYFSLH QMSLGLFRVM GSLGRHMIVA NTFGSFAMLV VMTLGGFIIS RDSIPSWWIW GYWISPLMYA QNAASVNEFL
0701: GHNWQKTAGN HTSDSLGLAL LKERSLFSGN YWYWIGVAAL LGYTVLFNIL FTLFLAHLNP WGKFQAVVSR EELDEREKKR KGDEFVVELR EYLQHSGSIH
0801: GKYFKNRGMV LPFQPLSLSF SNINYYVDVP LGLKEQGILE DRLQLLVNIT GAFRPGVLTA LVGVSGAGKT TLMDVLAGRK TGGTIEGDVY ISGFPKRQET
0901: FARISGYCEQ NDVHSPCLTV VESLLFSACL RLPADIDSET QRAFVHEVME LVELTSLSGA LVGLPGVDGL STEQRKRLTI AVELVANPSI VFMDEPTSGL
1001: DARAAAIVMR TVRNIVNTGR TIVCTIHQPS IDIFESFDEL LFMKRGGELI YAGPLGQKSC ELIKYFESIE GVQKIKPGHN PAAWMLDVTA STEEHRLGVD
1101: FAEIYRNSNL CQRNKELIEV LSKPSNIAKE IEFPTRYSQS LYSQFVACLW KQNLSYWRNP QYTAVRFFYT VVISLMLGTI CWKFGSKRDT QQQLFNAMGS
1201: MYAAVLFIGI TNATAAQPVV SIERFVSYRE RAAGMYSALP FAFAQVFIEF PYVLAQSTIY STIFYAMAAF EWSAVKFLWY LFFMYFSIMY FTFYGMMTTA
1301: ITPNHNVASI IAAPFYMLWN LFSGFMIPYK RIPLWWRWYY WANPVAWTLY GLLVSQYGDD ERSVKLSDGI HQVMVKQLLE DVMGYKHDFL GVSAIMVVAF
1401: CVFFSLVFAF AIKAFNFQRR
Arabidopsis Description
ABCG32PEC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.