Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00201 | Sorghum | plasma membrane | 89.49 | 93.76 |
| Os01t0177900-01 | Rice | plasma membrane | 85.34 | 89.41 |
| TraesCS3B01G141700.2 | Wheat | golgi, unclear | 85.21 | 88.96 |
| HORVU3Hr1G022800.1 | Barley | plasma membrane | 85.14 | 88.89 |
| TraesCS3A01G122500.2 | Wheat | plasma membrane | 85.01 | 88.75 |
| TraesCS3D01G124400.2 | Wheat | plasma membrane | 85.14 | 86.77 |
| CDY48188 | Canola | cytosol, peroxisome, plasma membrane | 65.93 | 69.37 |
| Bra034314.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 65.86 | 69.3 |
| CDX77057 | Canola | cytosol, peroxisome, plasma membrane | 65.86 | 69.3 |
| AT2G26910.1 | Thale cress | cytosol, peroxisome, plasma membrane | 65.33 | 68.73 |
| GSMUA_Achr7P08510_001 | Banana | plasma membrane | 72.62 | 68.32 |
| Solyc05g018510.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 64.52 | 67.84 |
| PGSC0003DMT400067210 | Potato | plasma membrane | 62.52 | 66.38 |
| Solyc06g065670.2.1 | Tomato | plasma membrane | 62.25 | 66.05 |
| Zm00001d011315_P002 | Maize | plasma membrane | 55.22 | 57.13 |
| Zm00001d053612_P003 | Maize | mitochondrion, plasma membrane | 54.89 | 56.83 |
| Zm00001d011319_P003 | Maize | cytosol, mitochondrion, peroxisome, plasma membrane | 55.35 | 56.53 |
| Zm00001d044443_P001 | Maize | cytosol, mitochondrion, nucleus, plasma membrane | 54.48 | 56.22 |
| Zm00001d048860_P001 | Maize | cytosol, nucleus, plasma membrane | 52.61 | 54.36 |
| Zm00001d044442_P036 | Maize | plasma membrane | 54.89 | 52.1 |
| Zm00001d021647_P003 | Maize | plastid | 49.87 | 51.52 |
| Zm00001d036986_P002 | Maize | plasma membrane | 51.0 | 50.53 |
| Zm00001d025012_P003 | Maize | plastid | 49.53 | 50.37 |
| Zm00001d009037_P003 | Maize | plastid | 49.2 | 50.17 |
| Zm00001d043598_P003 | Maize | cytosol, nucleus, plasma membrane | 49.73 | 49.93 |
| Zm00001d046277_P002 | Maize | cytosol, nucleus, plasma membrane | 51.41 | 49.87 |
| Zm00001d034940_P003 | Maize | plastid | 49.4 | 49.53 |
| Zm00001d019961_P001 | Maize | plasma membrane | 33.8 | 47.82 |
| Zm00001d052726_P008 | Maize | cytosol, nucleus, plasma membrane | 43.51 | 47.48 |
| Zm00001d003354_P002 | Maize | cytosol, peroxisome, plasma membrane | 45.45 | 47.38 |
| Zm00001d031724_P003 | Maize | plasma membrane | 44.04 | 47.13 |
| Zm00001d023392_P002 | Maize | cytosol, peroxisome, plasma membrane | 44.85 | 45.52 |
Protein Annotations
| EntrezGene:100384030 | MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | UniProt:A0A1D6MJV0 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_2 |
| InterPro:ABC_2_trans | InterPro:ABC_trans_N | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042335 |
| InterPro:IPR003439 | ProteinID:ONM29550.1 | InterPro:P-loop_NTPase | InterPro:PDR_assoc | PFAM:PF00005 | PFAM:PF01061 |
| PFAM:PF08370 | PFAM:PF14510 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF280 | SMART:SM00382 |
| SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0008437A71 | EnsemblPlantsGene:Zm00001d039631 | EnsemblPlants:Zm00001d039631_P002 | EnsemblPlants:Zm00001d039631_T002 |
| SEG:seg | : | : | : | : | : |
Description
glossy13 glossy13
Coordinates
chr3:+:9567326..9577244
Molecular Weight (calculated)
168903.0 Da
IEP (calculated)
8.177
GRAVY (calculated)
0.148
Length
1494 amino acids
Sequence
(BLAST)
(BLAST)
0001: MWAAEAAFSR SGSWREAEDE REALRWAALQ RLPTVTRARR GLLRSPAPDG AAAVEGDDVL CEVDVAGLSS GDRTALVDRL VADSGDSEHF FRRIRSRFDA
0101: VQIEFPKIEV RYEDVTVDAY VHVGSRALPT IPNFICNMTE VGPKILTAIF FVNIRFSSYR MTLLLGPPSS GKTTLLLALA GRLGPGLKMS GNITYNGHHL
0201: NEFVPQRTSA YVSQQDWHAS EMTVRETLEF AGRCQGVGIK YDMLVELLRR EKNAGIKPDE DLDVFMKALA LEGKQTSLVA EYIMKILGLD VCADTIVGDE
0301: MIKGISGGQK KRLTTGELLV GSARVLFMDE ISTGLDSATT YQIIKYLRNS THALDGTTII SLLQPAPETY ELFDDVILIA EGQIVYQGPR EYAVDFFGAM
0401: GFRCPERKNV ADFLQEVHTS SLLNSIPTGI SRGFTFLSSQ VLSKKDQQQY WCHYDYPYQF VSVSKFAEAF KTFIIGKRLH QELTVPYNRH HNHPAALCTS
0501: SYGVKRLELL KSNYQWQRLL MKRNSFIYVF KFIQLLLVAL ITMTVFFRST MHHDSVDDGI IYLGALYFAI VMILFNGFTE VSMLVTKLPV LYKHRDLHFY
0601: PPWAYTLPSW LLSIPTSLYE SGMWVLVTYY VVGYDPQFTR FLGQFLLLFF LHQTSLALFR VMASLGRNMI VANTFGSFAL LVVMILGGFI ITKESIPVWW
0701: IWGYWVSPMM YAQNAISVNE FHGHSWNKQF ANQNITMGEA ILTGYGLFKE KYWFWIGVGA LFGYAIILNI LFTMFLTLLN PIGNLQAVVA KDQVRHRDSR
0801: RKNDRVALEL RSYLHSNSLS GISTTMLMYQ WYELKKQGVA EDRLQLLVDV TGAFRPGILT ALVGVSGAGK TTLMDVLAGR KTGGLIEGSI TISGYPKNQE
0901: TFTRISGYCE QNDVHSPCLT VIESLLYSAC LRLPSHVDAD TQRAFVEEVM ELVELNPLSG ALVGLPGVNG LSTEQRKRLT IAVELVANPS IVFMDEPTSG
1001: LDARSAAIVM RTVRNIVNTG RTIVCTIHQP SIDIFESFDE VKGVNRSHYL SYRFYKHESL LVQTNIFHTC DESPLVSYAY GLPVSLRSKT LLFMKRGGQL
1101: IYAGPLGAKS RNLVDFFEAI PGVPKIRDGY NPAAWMLEVT STQMEQILGV DFAEYYRQSK LFQQTREIVE ALSRPSSESK ELTFATKYAQ PFCAQYMACL
1201: WKHNLSYWRN PQYTAVRFFY TVIISLMFGT ICWKFGSRRG TQHDIFNAMG AMYAAVLFIG ITNATSVQPV ISIERFVSYR ERAAGMYSAL PFAFSLVTVE
1301: FPYILVQSLI YGSIFYSLGS FEWTAAKFLW YLFFMYFTLL YFTFYGMMTT AITPNHTIAP IIAAPFYTLW NLFCGFMIPR KLEGALAALL TDRLFSLVNA
1401: LHVQRIPVWW RWYYWANPVS WTLYGLLTSQ FGDLDQPLLM ADGVTSTTVV AFLEEHFGFR HDFLGAVAAM VAGFCVLFAV VFALAIKYLN FQRR
0101: VQIEFPKIEV RYEDVTVDAY VHVGSRALPT IPNFICNMTE VGPKILTAIF FVNIRFSSYR MTLLLGPPSS GKTTLLLALA GRLGPGLKMS GNITYNGHHL
0201: NEFVPQRTSA YVSQQDWHAS EMTVRETLEF AGRCQGVGIK YDMLVELLRR EKNAGIKPDE DLDVFMKALA LEGKQTSLVA EYIMKILGLD VCADTIVGDE
0301: MIKGISGGQK KRLTTGELLV GSARVLFMDE ISTGLDSATT YQIIKYLRNS THALDGTTII SLLQPAPETY ELFDDVILIA EGQIVYQGPR EYAVDFFGAM
0401: GFRCPERKNV ADFLQEVHTS SLLNSIPTGI SRGFTFLSSQ VLSKKDQQQY WCHYDYPYQF VSVSKFAEAF KTFIIGKRLH QELTVPYNRH HNHPAALCTS
0501: SYGVKRLELL KSNYQWQRLL MKRNSFIYVF KFIQLLLVAL ITMTVFFRST MHHDSVDDGI IYLGALYFAI VMILFNGFTE VSMLVTKLPV LYKHRDLHFY
0601: PPWAYTLPSW LLSIPTSLYE SGMWVLVTYY VVGYDPQFTR FLGQFLLLFF LHQTSLALFR VMASLGRNMI VANTFGSFAL LVVMILGGFI ITKESIPVWW
0701: IWGYWVSPMM YAQNAISVNE FHGHSWNKQF ANQNITMGEA ILTGYGLFKE KYWFWIGVGA LFGYAIILNI LFTMFLTLLN PIGNLQAVVA KDQVRHRDSR
0801: RKNDRVALEL RSYLHSNSLS GISTTMLMYQ WYELKKQGVA EDRLQLLVDV TGAFRPGILT ALVGVSGAGK TTLMDVLAGR KTGGLIEGSI TISGYPKNQE
0901: TFTRISGYCE QNDVHSPCLT VIESLLYSAC LRLPSHVDAD TQRAFVEEVM ELVELNPLSG ALVGLPGVNG LSTEQRKRLT IAVELVANPS IVFMDEPTSG
1001: LDARSAAIVM RTVRNIVNTG RTIVCTIHQP SIDIFESFDE VKGVNRSHYL SYRFYKHESL LVQTNIFHTC DESPLVSYAY GLPVSLRSKT LLFMKRGGQL
1101: IYAGPLGAKS RNLVDFFEAI PGVPKIRDGY NPAAWMLEVT STQMEQILGV DFAEYYRQSK LFQQTREIVE ALSRPSSESK ELTFATKYAQ PFCAQYMACL
1201: WKHNLSYWRN PQYTAVRFFY TVIISLMFGT ICWKFGSRRG TQHDIFNAMG AMYAAVLFIG ITNATSVQPV ISIERFVSYR ERAAGMYSAL PFAFSLVTVE
1301: FPYILVQSLI YGSIFYSLGS FEWTAAKFLW YLFFMYFTLL YFTFYGMMTT AITPNHTIAP IIAAPFYTLW NLFCGFMIPR KLEGALAALL TDRLFSLVNA
1401: LHVQRIPVWW RWYYWANPVS WTLYGLLTSQ FGDLDQPLLM ADGVTSTTVV AFLEEHFGFR HDFLGAVAAM VAGFCVLFAV VFALAIKYLN FQRR
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.