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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, unclear

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, unclear
Any Predictor:cytosol, plasma membrane
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
golgi: 25769308
unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G122500.2 Wheat plasma membrane 99.44 99.44
HORVU3Hr1G022800.1 Barley plasma membrane 98.67 98.67
TraesCS3D01G124400.2 Wheat plasma membrane 99.16 96.79
EES00201 Sorghum plasma membrane 92.73 93.06
Os01t0177900-01 Rice plasma membrane 91.54 91.87
Zm00001d039631_P002 Maize plasma membrane 88.96 85.21
CDY48188 Canola cytosol, peroxisome, plasma membrane 71.63 72.18
Bra034314.1-P Field mustard cytosol, peroxisome, plasma membrane 71.56 72.11
CDX77057 Canola cytosol, peroxisome, plasma membrane 71.49 72.04
AT2G26910.1 Thale cress cytosol, peroxisome, plasma membrane 71.21 71.76
GSMUA_Achr7P08510_001 Banana plasma membrane 77.99 70.28
Solyc05g018510.2.1 Tomato cytosol, peroxisome, plasma membrane 69.67 70.16
PGSC0003DMT400067210 Potato plasma membrane 67.78 68.94
Solyc06g065670.2.1 Tomato plasma membrane 67.44 68.54
TraesCS7B01G271500.1 Wheat cytosol 26.14 60.91
TraesCS7B01G292700.1 Wheat plasma membrane 57.79 57.83
TraesCS3B01G248400.1 Wheat cytosol, peroxisome, plasma membrane 58.63 57.7
TraesCS6B01G205900.1 Wheat plasma membrane 57.93 57.41
TraesCS3B01G523700.1 Wheat mitochondrion 42.63 57.01
TraesCS3B01G248500.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 57.72 57.0
TraesCS3B01G306400.2 Wheat cytosol, mitochondrion, nucleus, plasma membrane 57.79 56.03
TraesCS3B01G524400.1 Wheat cytosol, peroxisome, plasma membrane 56.25 55.98
TraesCS2B01G149900.1 Wheat cytosol, peroxisome, plasma membrane 48.57 55.96
TraesCS5B01G183500.1 Wheat cytosol, nucleus, plasma membrane 56.11 55.46
TraesCS5B01G572600.1 Wheat plastid 53.95 53.13
TraesCS7B01G000200.1 Wheat plastid 53.67 52.71
TraesCS2B01G606700.2 Wheat plastid 53.11 51.98
TraesCS5B01G449500.1 Wheat plastid 52.41 51.62
TraesCS7B01G088800.1 Wheat plastid 52.27 51.55
TraesCS7B01G167100.1 Wheat cytosol, nucleus, plasma membrane 47.17 50.0
TraesCS4B01G331400.3 Wheat plasma membrane 34.1 48.85
TraesCS4B01G332300.3 Wheat cytosol, nucleus, plasma membrane 45.7 48.59
TraesCS5B01G517700.1 Wheat plasma membrane 32.35 47.98
TraesCS4B01G054700.1 Wheat cytosol, peroxisome, plasma membrane 47.87 47.7
TraesCS7B01G005200.1 Wheat plasma membrane 43.96 47.62
TraesCS5B01G155400.3 Wheat plasma membrane 47.45 47.48
TraesCS7B01G381000.1 Wheat cytosol, nucleus, plasma membrane 45.07 46.44
TraesCS7B01G381200.2 Wheat plasma membrane 46.05 46.31
Protein Annotations
MapMan:21.9.4.3MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABCG_PDR_2InterPro:ABC_2_trans
InterPro:ABC_trans_NInterPro:ABC_transporter-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0007275GO:GO:0008150
GO:GO:0016020GO:GO:0016787GO:GO:0016887GO:GO:0042335InterPro:IPR003439InterPro:P-loop_NTPase
InterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370PFAM:PF14510PFscan:PS50893
PANTHER:PTHR19241PANTHER:PTHR19241:SF280SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixEnsemblPlantsGene:TraesCS3B01G141700
EnsemblPlants:TraesCS3B01G141700.2TIGR:cd03232SEG:seg:::
Description
No Description!
Coordinates
chr3B:+:128660989..128670515
Molecular Weight (calculated)
161645.0 Da
IEP (calculated)
8.018
GRAVY (calculated)
0.141
Length
1431 amino acids
Sequence
(BLAST)
0001: MWAAEAPFSR SGSWREAEDE QEALRWAALQ RLPTVARARR GLLRSPAVAP GGTGAGGPVE GDDALCEVDV TGLSSGDRTA LVDRLLADSG DAEQFFRRIR
0101: ARFDAVHIEF PKIEVRYEDL TVDAYVHVGS RALPTIPNFI CNMTEAFLRH LRIYRGGRMK LPILDNINGI IRPSRMTLLL GPPSSGKTTL LLALAGRLGP
0201: GLKMSGSITY NGHHLNEFVP QRTSAYVSQQ DWHASEMTVR ETLEFAGRCQ GVGIKYDMLV ELLRREKNAG IKPDEDLDVF MKALALEGRQ TSLVAEYVMK
0301: ILGLDICADT IVGDEMIKGI SGGQKKRLTT GELLVGSARV LFMDEISTGL DSATTYQIIK YLRDSTHALD GTTIISLLQP APETYELFDD VILISEGQIV
0401: YQGPREYAAD FFAAMGFRCP ERKNVADFLQ EVLSKKDQQQ YWCQYDYPYQ FVSVTKFAEA FKTFVIGKRL HDDLDRPYNR KHNHPAALST SNYGVKRLEI
0501: LKSNFQWQRL LMKRNSFIYV FKFIQLLLVA LITMTVFFRA TMHHDSVDDG IIYLGALYFA IVMILFNGFT EVSMLVAKLP VLYKHRDLHF YPPWAYTLPS
0601: WLLSIPTSLI ESGMWTLVTY YVVGYDPQFT RFLGQFLLLF FLHQTSLALF RVMASLGRNM IVANTFGSFA LLVVMILGGF IITKESIPVW WIWGYWISPM
0701: MYAQNAISVN EFHGHSWSKP FADQNITLGE AVLTGYGLFK EKYWFWIGVG ALLGYTIVLN ALFTLFLTIL NPIGNMQAVV SKDAIRNKDS RRSDRVALEL
0801: RSYLHSNSLN GLKLKEQKGM VLPFQPLSMC FKNINYYVDV PEELKKQGIA EDRLQLLVDV TGAFRPGVLT ALVGVSGAGK TTLMDVLAGR KTGGLIEGSI
0901: SISGYPKNQE TFTRISGYCE QNDVHSPCLT VIESLLYSAC LRLPSHVNDD TQRAFVEEVM ELVELNPLSG ALVGLPGVNG LSTEQRKRLT IAVELVANPS
1001: IVFMDEPTSG LDARSAAIVM RTVRNIVNTG RTIVCTIHQP SIDIFESFDE LLFMKRGGQL IYAGPLGSKS RNLVEFFQAV PGVPKIRDGY NPAAWMLDVT
1101: STQMEQILGV DFAEYYRQSK LFLQTKEIVE ALSKPNSEVK ELTFSTKYAQ PFCAQFIACL WKQNLSYWRN PQYTAVRFFY TVIISLMFGT ICWKFGSRRE
1201: TQHDIFNAMG AMYAAVLFIG ITNATSVQPV ISIERFVSYR ERAAGMYSAL PFAFSLVTVE FPYILVQSLV YGTIFYSLGS FEWTAVKFLW FLFFMYFTLL
1301: YFTFYGMMTT AITPNHMVAP IIAAPFYTLW NLFCGFMIPR KLIPVWWRWY YWANPVSWTL YGLLTSQFGD LDQPLLLADG IRTTTVVAFL EEHFGFRHDF
1401: LGVVATMVVG FCVLFAVVFA LAIRNLNFQR R
Best Arabidopsis Sequence Match ( AT2G26910.1 )
(BLAST)
0001: MWNSAENAFS RSTSFKDEIE DEEELRWAAL QRLPTYSRIR RGIFRDMVGE PKEIQIGNLE ASEQRLLLDR LVNSVENDPE QFFARVRKRF DAVDLKFPKI
0101: EVRFQNLMVE SFVHVGSRAL PTIPNFIINM AEGLLRNIHV IGGKRNKLTI LDGISGVIRP SRLTLLLGPP SSGKTTLLLA LAGRLGTNLQ TSGKITYNGY
0201: DLKEIIAPRT SAYVSQQDWH VAEMTVRQTL EFAGRCQGVG FKYDMLLELA RREKLAGIVP DEDLDIFMKS LALGGMETSL VVEYVMKILG LDTCADTLVG
0301: DEMIKGISGG QKKRLTTGEL LVGPARVLFM DEISNGLDSS TTHQIIMYMR HSTHALEGTT VISLLQPSPE TYELFDDVIL MSEGQIIYQG PRDEVLDFFS
0401: SLGFTCPDRK NVADFLQEVT SKKDQQQYWS VPFRPYRYVP PGKFAEAFRS YPTGKKLAKK LEVPFDKRFN HSAALSTSQY GVKKSELLKI NFAWQKQLMK
0501: QNAFIYVFKF VQLLLVALIT MTVFCRTTMH HNTIDDGNIY LGSLYFSMVI ILFNGFTEVP MLVAKLPVLY KHRDLHFYPS WAYTLPSWLL SIPTSIIESA
0601: TWVAVTYYTI GYDPLFSRFL QQFLLYFSLH QMSLGLFRVM GSLGRHMIVA NTFGSFAMLV VMTLGGFIIS RDSIPSWWIW GYWISPLMYA QNAASVNEFL
0701: GHNWQKTAGN HTSDSLGLAL LKERSLFSGN YWYWIGVAAL LGYTVLFNIL FTLFLAHLNP WGKFQAVVSR EELDEREKKR KGDEFVVELR EYLQHSGSIH
0801: GKYFKNRGMV LPFQPLSLSF SNINYYVDVP LGLKEQGILE DRLQLLVNIT GAFRPGVLTA LVGVSGAGKT TLMDVLAGRK TGGTIEGDVY ISGFPKRQET
0901: FARISGYCEQ NDVHSPCLTV VESLLFSACL RLPADIDSET QRAFVHEVME LVELTSLSGA LVGLPGVDGL STEQRKRLTI AVELVANPSI VFMDEPTSGL
1001: DARAAAIVMR TVRNIVNTGR TIVCTIHQPS IDIFESFDEL LFMKRGGELI YAGPLGQKSC ELIKYFESIE GVQKIKPGHN PAAWMLDVTA STEEHRLGVD
1101: FAEIYRNSNL CQRNKELIEV LSKPSNIAKE IEFPTRYSQS LYSQFVACLW KQNLSYWRNP QYTAVRFFYT VVISLMLGTI CWKFGSKRDT QQQLFNAMGS
1201: MYAAVLFIGI TNATAAQPVV SIERFVSYRE RAAGMYSALP FAFAQVFIEF PYVLAQSTIY STIFYAMAAF EWSAVKFLWY LFFMYFSIMY FTFYGMMTTA
1301: ITPNHNVASI IAAPFYMLWN LFSGFMIPYK RIPLWWRWYY WANPVAWTLY GLLVSQYGDD ERSVKLSDGI HQVMVKQLLE DVMGYKHDFL GVSAIMVVAF
1401: CVFFSLVFAF AIKAFNFQRR
Arabidopsis Description
ABCG32PEC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNA5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.