Factsheet for TraesCS3B01G248400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G234400.1	Wheat	plasma membrane	99.04	99.04
TraesCS3A01G217900.1	Wheat	cytosol	98.69	98.69
HORVU3Hr1G053350.8	Barley	vacuole	97.87	97.67
Os01t0609300-01	Rice	plasma membrane	79.44	89.33
Zm00001d011315_P002	Maize	plasma membrane	85.21	85.8
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	85.42	85.6
KXG32865	Sorghum	plasma membrane	85.76	85.53
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	63.69	81.16
EER98908	Sorghum	cytosol, nucleus, plasma membrane	81.43	81.04
Zm00001d044442_P036	Maize	plasma membrane	87.55	80.88
GSMUA_Achr9P02950_001	Banana	plasma membrane	72.42	75.81
GSMUA_Achr6P34530_001	Banana	plasma membrane	68.71	75.74
TraesCS3B01G248500.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	74.55	74.81
PGSC0003DMT400005785	Potato	cytosol, peroxisome, plasma membrane	31.64	73.6
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	70.98	72.62
TraesCS7B01G292700.1	Wheat	plasma membrane	70.43	71.61
TraesCS3B01G523700.1	Wheat	mitochondrion	52.34	71.12
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	60.52	70.68
KRH23522	Soybean	mitochondrion	68.91	70.27
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	71.32	70.26
PGSC0003DMT400076208	Potato	plastid	69.39	70.07
VIT_09s0002g05560.t01	Wine grape	plasma membrane	70.01	70.01
Solyc09g091660.2.1	Tomato	plastid	69.33	70.0
VIT_04s0008g04790.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	69.05	69.92
Solyc12g019640.1.1	Tomato	plasma membrane	29.23	69.9
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	67.88	69.9
TraesCS3B01G524400.1	Wheat	cytosol, peroxisome, plasma membrane	68.98	69.75
KRH47506	Soybean	endoplasmic reticulum	68.36	69.71
KRH09797	Soybean	endoplasmic reticulum	68.16	69.45
Solyc08g067620.2.1	Tomato	nucleus	69.33	69.37
KRH61824	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	68.91	69.15
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	67.19	69.14
KRH52503	Soybean	cytosol, peroxisome, plasma membrane	68.84	69.13
CDY39660	Canola	cytosol, nucleus, plasma membrane	67.19	69.05
AT1G15520.1	Thale cress	plastid	67.54	69.01
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	67.06	69.0
TraesCS5B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	68.71	68.99
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	67.81	68.71
Solyc12g098210.1.1	Tomato	plastid	67.26	68.63
TraesCS2B01G149900.1	Wheat	cytosol, peroxisome, plasma membrane	58.53	68.52
PGSC0003DMT400076209	Potato	plasma membrane	67.4	68.39
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	67.47	68.36
TraesCS6B01G205900.1	Wheat	plasma membrane	67.54	68.01
KRH16029	Soybean	cytosol	67.26	67.59
KRH67471	Soybean	endoplasmic reticulum	66.99	67.4
KRH05088	Soybean	endoplasmic reticulum	66.64	66.97
KRG95762	Soybean	mitochondrion	65.47	66.57
PGSC0003DMT400048449	Potato	cytosol, peroxisome, plasma membrane	55.43	66.23
KRH09795	Soybean	endoplasmic reticulum	67.33	64.75
TraesCS7B01G271500.1	Wheat	cytosol	27.24	64.5
KRH47220	Soybean	plasma membrane	41.88	64.04
PGSC0003DMT400005783	Potato	cytosol, peroxisome, plasma membrane	68.71	63.23
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	6.6	63.16
TraesCS3B01G141700.2	Wheat	golgi, unclear	57.7	58.63
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	64.79	58.47
Solyc12g019620.1.1	Tomato	cytosol, nucleus, plasma membrane	33.63	58.42
TraesCS5B01G572600.1	Wheat	plastid	57.02	57.05
TraesCS7B01G000200.1	Wheat	plastid	56.74	56.62
TraesCS5B01G449500.1	Wheat	plastid	56.19	56.23
TraesCS7B01G088800.1	Wheat	plastid	55.71	55.82
TraesCS2B01G606700.2	Wheat	plastid	55.78	55.47
TraesCS5B01G155400.3	Wheat	plasma membrane	49.86	50.7
TraesCS4B01G054700.1	Wheat	cytosol, peroxisome, plasma membrane	50.07	50.7
TraesCS7B01G167100.1	Wheat	cytosol, nucleus, plasma membrane	46.63	50.22
TraesCS4B01G331400.3	Wheat	plasma membrane	33.84	49.25
TraesCS5B01G517700.1	Wheat	plasma membrane	32.67	49.22
TraesCS7B01G381200.2	Wheat	plasma membrane	47.87	48.91
TraesCS4B01G332300.3	Wheat	cytosol, nucleus, plasma membrane	45.19	48.81
VIT_04s0008g04840.t01	Wine grape	plasma membrane	37.55	48.79
TraesCS7B01G381000.1	Wheat	cytosol, nucleus, plasma membrane	46.35	48.52
TraesCS7B01G005200.1	Wheat	plasma membrane	43.33	47.69

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_trans_N	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
InterPro:P-loop_NTPase	InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF273	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3B01G248400	EnsemblPlants:TraesCS3B01G248400.1	TIGR:cd03232	TIGR:cd03233	SEG:seg	:

Description

No Description!

Coordinates

chr3B:-:395852018..395858874

Molecular Weight (calculated)

163415.0 Da

IEP (calculated)

7.439

GRAVY (calculated)

0.050

Length

1454 amino acids

Sequence
(BLAST)

0001: MDATAEIHKV ASMRRDSGSI WRRGDDVFSR SSRDEDDEEA LRWAALEKLP TYDRVRRAIL PPLDGGEGAA PGAAAGKGVV DVHGLGPRER RALLERLVRV
0101: ADEDNERFLL KLKDRLERVG IEMPTIEVRF EHLVAEAEVR VGNSGLPTVL NSITNTLEEA ANALRILPNR KRTMPILHDV SGIIKPRRMT LLLGPPGSGK
0201: TTLLLALAGR LDEDLKVSGN VTYNGHGMEE FVPERTAAYI SQHDLHIGEM TVRETLAFSA RCQGVGTRFD MLTELSRREK AANIKPDADI DAFMKASSMG
0301: GLEANVNTDY VLKILGLEIC ADTMVGDEML RGISGGQRKR VTTGEMLVGP AKALFMDEIS TGLDSSTTFQ IVNSLRQSVH ILGGTAVISL LQPAPETYNL
0401: FDDIILLSDG QVVYQGPRDD VLEFFESVGF KCPERKGVAD FLQEVTSKKD QKQYWARGDE SYRFVPVKDF VRAFQSFHTG RAIRKELAVP FDKSKSHPAA
0501: LTTTRYGVSG TELLKANIDR EILLMKRNSF VYMFRTFQLI LMSFIAMTLF FRTKMKRDSV TNGGIYMGAL FFGVLMIMFN GFSELALTVF KLPVFFKQRD
0601: LLFYPAWAYT IPSWILKIPI TFIEVGGYVF ITYYVMGFDP NVGRFFKQYL LMLAINQMAA SLFRFIGGAA RNMIVANVFA SFMLLIFMVL GGFILVREKV
0701: KKWWIWGYWI SPLMYAQNAI SVNEFFGHSW DKILNSTASN ETLGVQVLKY RGVFPEAKWY WIGLGAMLGY TLLFNALFTL ALTYLKAYGN SRSSVSEDEL
0801: KEKHANLNGE VLDNDRLESP SNDGPIRMNT GNDSAIVKEN SSPMQRGMVL PFLPLSLTFD NIRYSVDMPP EMKAQGVVED RLELLKGVSG SFRPGVLTAL
0901: MGVSGAGKTT LMDVLAGRKT GGYIQGNISI SGYPKKQETF ARVSGYCEQN DIHSPQVTVY ESLLFSAWLR LPEDVDSNKR RVFIEEVMEL VELKPLKDAL
1001: VGLPGVNGLS TEQRKRLTIA VELVANPSII FMDEPTSGLD ARAAAIVMRT VRNTVDTGRT VVCTIHQPSI DIFEAFDELF LMKRGGEEIY AGPLGHHSAD
1101: LINYYEGIHG VSKIKDGYNP ATWMLEVTTI GQEQMLGIDF SDIYKKSELY QRNKALIKEL SQPVPGSTDL YFPTQYSQSS VTQCMACLWK QNLSYWRNPP
1201: YNAVRFLFTT VIALLFGTIF WDLGGKMSQS QDLFNAMGSM YAAVLFIGIM NCTSVQPVVA VERTVFYRER AAGMYSAFPY AFGQVVIELP YTLAQATVYG
1301: VIVYSMIGFE WTAPKFFWYL FFMYFTLLYF TFYGMMAVGL TPNYHIASIV SSAFYAIWNL FSGFIIPRPK VPIWWRWYCW VCPVAWTLYG LVVSQFGDVT
1401: TPMEDGTPVK DFIEGYFDFK HSWLGYVATV VVAFAVLFAF LFGFAIMKLN FQKR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.