Factsheet for VIT_09s0002g05560.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	mitochondrion
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g05370.t01	Wine grape	mitochondrion, plasma membrane	85.14	87.12
GSMUA_Achr1P14530_001	Banana	mitochondrion, plasma membrane	60.39	76.95
KRH23522	Soybean	mitochondrion	74.62	76.09
KRH09797	Soybean	endoplasmic reticulum	74.0	75.4
Solyc09g091660.2.1	Tomato	plastid	73.59	74.31
KRH47506	Soybean	endoplasmic reticulum	72.76	74.19
Solyc12g098210.1.1	Tomato	plastid	72.7	74.18
PGSC0003DMT400076208	Potato	plastid	73.45	74.17
PGSC0003DMT400061280	Potato	cytosol, nucleus, plasma membrane, plastid	72.83	73.8
Bra026124.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	71.46	73.53
Solyc05g053590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plasma membrane	71.39	73.51
PGSC0003DMT400034130	Potato	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	62.93	73.49
CDY36570	Canola	cytosol, nucleus, plasma membrane, plastid	71.39	73.46
GSMUA_Achr9P02950_001	Banana	plasma membrane	70.15	73.43
VIT_04s0008g04790.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	72.49	73.4
GSMUA_Achr6P34530_001	Banana	plasma membrane	66.44	73.24
CDY39660	Canola	cytosol, nucleus, plasma membrane	71.25	73.22
Solyc12g100180.1.1	Tomato	mitochondrion, nucleus, plasma membrane, plastid	72.15	73.1
PGSC0003DMT400076209	Potato	plasma membrane	72.01	73.06
AT1G15520.1	Thale cress	plastid	70.7	72.24
Os01t0609300-01	Rice	plasma membrane	64.24	72.24
KRH67471	Soybean	endoplasmic reticulum	71.6	72.04
EES03260	Sorghum	plasma membrane	63.07	71.64
PGSC0003DMT400043433	Potato	endoplasmic reticulum, plasma membrane	7.43	71.05
Os01t0609900-02	Rice	plasma membrane	67.47	70.68
TraesCS3D01G234400.1	Wheat	plasma membrane	70.15	70.15
TraesCS3A01G217900.1	Wheat	cytosol	70.08	70.08
Zm00001d011315_P002	Maize	plasma membrane	69.53	70.01
TraesCS3B01G248400.1	Wheat	cytosol, peroxisome, plasma membrane	70.01	70.01
HORVU3Hr1G053350.8	Barley	vacuole	70.15	70.01
KRG95762	Soybean	mitochondrion	68.57	69.72
Zm00001d044443_P001	Maize	cytosol, mitochondrion, nucleus, plasma membrane	69.33	69.61
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	69.46	69.61
Os08t0384500-01	Rice	plasma membrane	36.52	69.59
TraesCS3A01G218000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	69.26	69.5
TraesCS3B01G248500.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	69.26	69.5
KXG32865	Sorghum	plasma membrane	69.67	69.48
TraesCS2A01G483300.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	69.19	69.43
TraesCS3D01G234300.2	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	69.19	69.43
KRH09795	Soybean	endoplasmic reticulum	72.01	69.25
Zm00001d011319_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	69.53	69.1
Os01t0342750-01	Rice	plasma membrane	33.08	68.62
Os01t0609200-00	Rice	plasma membrane	68.78	68.31
HORVU3Hr1G053380.1	Barley	cytosol, mitochondrion, peroxisome, plasma membrane	69.26	68.27
TraesCS7B01G292700.1	Wheat	plasma membrane	66.92	68.04
HORVU7Hr1G092510.2	Barley	plasma membrane	67.4	68.01
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	68.36	67.94
TraesCS7D01G386600.1	Wheat	plasma membrane	67.47	67.89
TraesCS7A01G391100.1	Wheat	plasma membrane	67.33	67.84
TraesCS3A01G272800.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	67.06	67.71
Os01t0609000-00	Rice	plasma membrane	68.29	67.64
HORVU3Hr1G071470.1	Barley	cytosol, mitochondrion, nucleus, plasma membrane	66.92	67.57
KRH47220	Soybean	plasma membrane	44.15	67.51
TraesCS3D01G272200.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.78	67.43
TraesCS3B01G523700.1	Wheat	mitochondrion	49.59	67.38
EER98908	Sorghum	cytosol, nucleus, plasma membrane	67.61	67.28
GSMUA_Achr9P01490_001	Banana	plasma membrane	68.98	67.18
HORVU7Hr1G092380.8	Barley	cytosol	66.51	66.83
KXG32860	Sorghum	plasma membrane	66.92	66.51
TraesCS7A01G391000.1	Wheat	plasma membrane	66.23	66.32
TraesCSU01G097600.2	Wheat	plasma membrane	66.23	66.32
TraesCS7D01G386500.1	Wheat	plasma membrane	66.16	66.25
TraesCS3B01G524400.1	Wheat	cytosol, peroxisome, plasma membrane	65.41	66.13
TraesCS3A01G479800.1	Wheat	cytosol, nucleus, plasma membrane	65.68	66.09
TraesCS3B01G306400.2	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	66.92	65.92
TraesCS3D01G474700.1	Wheat	cytosol, nucleus, plasma membrane	65.47	65.88
HORVU3Hr1G105140.4	Barley	cytosol, peroxisome, plasma membrane	65.34	65.7
EER98758	Sorghum	cytosol, nucleus, plasma membrane	65.41	65.63
TraesCS5D01G190600.1	Wheat	cytosol, nucleus, plasma membrane	65.34	65.61
TraesCS5B01G183500.1	Wheat	cytosol, nucleus, plasma membrane	65.13	65.4
HORVU5Hr1G056280.6	Barley	cytosol, nucleus, plasma membrane	65.2	65.38
KXG20401	Sorghum	plasma membrane	65.13	65.31
TraesCS5A01G185500.1	Wheat	cytosol, nucleus, plasma membrane	62.24	64.83
TraesCS2B01G149900.1	Wheat	cytosol, peroxisome, plasma membrane	55.36	64.81
Zm00001d044442_P036	Maize	plasma membrane	70.01	64.68
TraesCS2D01G130000.1	Wheat	cytosol, peroxisome, plasma membrane	61.97	62.96
Os09t0333000-00	Rice	plasma membrane	35.14	62.93
VIT_08s0007g03710.t01	Wine grape	plastid	62.59	62.72
KRG95752	Soybean	cytosol, peroxisome, plasma membrane	68.43	61.76
VIT_06s0061g01490.t01	Wine grape	plastid	61.14	61.14
VIT_13s0074g00680.t01	Wine grape	plastid	60.73	59.82
Os09t0332300-00	Rice	plasma membrane	33.91	59.69
TraesCS6D01G094800.1	Wheat	plasma membrane	37.62	59.07
TraesCS6A01G107100.1	Wheat	mitochondrion, plasma membrane	50.76	58.66
TraesCS2A01G127800.1	Wheat	cytosol, peroxisome, plasma membrane	31.71	58.58
Os01t0516900-00	Rice	plasma membrane	27.1	56.13
VIT_06s0004g06560.t01	Wine grape	mitochondrion, plasma membrane	48.69	55.62
VIT_14s0060g00470.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	52.34	52.56
VIT_04s0008g04840.t01	Wine grape	plasma membrane	38.51	50.04

Protein Annotations

EntrezGene:100251419	wikigene:100251419	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_1
InterPro:ABCG_PDR_2	InterPro:ABC_2_trans	InterPro:ABC_trans_N	InterPro:ABC_transporter-like	ProteinID:CCB59536	ProteinID:CCB59536.1
ncoils:Coil	UniProt:F6HX66	EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EntrezGene:LOC100251419	wikigene:LOC100251419	InterPro:P-loop_NTPase
InterPro:PDR_assoc	PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFAM:PF14510	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF456	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000210A4E8
ArrayExpress:VIT_09s0002g05560	EnsemblPlantsGene:VIT_09s0002g05560	EnsemblPlants:VIT_09s0002g05560.t01	RefSeq:XP_003632872	RefSeq:XP_003632872.1	RefSeq:XP_003632874
RefSeq:XP_003632874.1	RefSeq:XP_010654717.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr9:-:5281296..5288255

Molecular Weight (calculated)

164337.0 Da

IEP (calculated)

6.885

GRAVY (calculated)

0.022

Length

1454 amino acids

Sequence
(BLAST)

0001: MATAEIYRAS GSLRKDSSSI WRNSGAEVFS RTSGDEDDEE ALKWAALEKL PTYNRMRKGL LMGSEGEANE VDIHNLGLQE RKNLVERLVK IADEDNEKFL
0101: LKLKNRIDRV GIDLPEIEVR FEHLTIDAEA YVGSRALPSF INSAFNQIED ILNALRILPS RKKKFTILHD VSGIIKPRRM TLLLGPPSSG KTTLLLALSG
0201: KLDSSLKVMG SVTYNGHGMN EFVPQRTAAY ISQLDTHIGE MTVRETLAFS ARCQGVGDRY DMLAELSRRE KSANIKPDPD IDVFMKAVAA EGQKENVITD
0301: YTLKILGLEV CADTMVGDEM VRGISGGQRK RVTTGEMLVG PSKALFMDEI STGLDSSTTY QIVNSLRQNI HIFKGTALIS LLQPAPETYN LFDDIILLSD
0401: SQIVYQGPRE DVLDFFESMG FRCPERKGVA DFLQEVTSRK DQEQYWICKD EPYSFVTVKE FAEAFQSFHI GRKLGDELAT PFDKTKSHPA AMKTEKYGVR
0501: KKELLDACIA REYLLMKRNS FVYIFKLTQL TIMAVIGMTI FLRTEMHKNT TEDGNIYTGA LFFIVITVMF NGMSELAMTI VKLPVFYKQR GLLFYPAWAY
0601: ALPSWFLKIP ITFVEVGVWV FITYYVIGFD PNVGRLFRQY LLLLLLNQVA SSLFRFIAAA SRNMIIANTF GTFALLLLFA LGGFVLSREN IKKWWIWVYW
0701: SSPLMYAQNA IVVNEFLGKS WSKNASTTST ESLGVTVLKS RGFFTEAHWC WIGAGALLGF IFVFNFFYTV ALTYLNPFEK PQAVITEESD NAKTGGKIEL
0801: SSHRKGSIDQ TASTKRGGEI GRSISSTFSY VTEEAIAEAN HNKKKGMVLP FQPHSITFDD IRYSVDMPEE MKSQGVLEDK LELLKGVSGA FRPGVLTALM
0901: GVSGAGKTTL MDVLAGRKTG GYIEGNISIS GYPKKQETFA RICGYCEQND IHSPHVTIHE SLLYSAWLRL SPDVDAETRM MFIEEVMELV ELTPLRDALV
1001: GLPGVNGLST EQRKRLTIAV ELVANPSIIF MDEPTSGLDA RAAAIVMRTV RNTVDTGRTV VCTIHQPSID IFEAFDELLL LKRGGQEIYV GPLGRHSSHL
1101: IKYFEGIEGV SKIKDGYNPA TWMLEVTTSA QELILGVDFT EIYKNSDLYR NNKDLLKELS QPTPGSKDLY FPTQYSQSFF TQCMACLWKQ RWSYWRNPPY
1201: TAVRFFFTTF IALMFGTMFW DLGTQRTRQQ DLSNAMGSMY AAVIFLGFQN GQSVQPVVVV ERTVFYRERA AGMYSAMPYA FAQALVEIPY VFSQAVVYGA
1301: IVYAMIGFEW TTAKFFWYIF FTFFSLLYFT FFGMMAVAAT PNQHIAAIIA AAFYALWNLF SGFIIPRTRI PVWWRWYYWA CPVAWTLYGL VTSQYGDIED
1401: RLLDTNVTVK QYLDDYFGFE HDFLGVVAAV IVGFTVLFLF IFAFSIKAFN FQRR

Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)

0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR

Arabidopsis Description

ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.