Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 2
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG32863 Sorghum cytosol, peroxisome, plasma membrane 94.38 94.83
Zm00001d011315_P002 Maize plasma membrane 92.52 93.42
Zm00001d044442_P036 Maize plasma membrane 94.24 87.29
Os01t0609300-01 Rice plasma membrane 76.95 86.77
HORVU3Hr1G053350.8 Barley vacuole 85.8 85.86
TraesCS3B01G248400.1 Wheat cytosol, peroxisome, plasma membrane 85.53 85.76
TraesCS3D01G234400.1 Wheat plasma membrane 85.32 85.56
TraesCS3A01G217900.1 Wheat cytosol 85.32 85.56
EES03255 Sorghum cytosol, peroxisome, plasma membrane, plastid 81.28 81.0
EER98908 Sorghum cytosol, nucleus, plasma membrane 81.0 80.83
GSMUA_Achr1P14530_001 Banana mitochondrion, plasma membrane 62.35 79.67
KXG32860 Sorghum plasma membrane 79.84 79.56
EES03260 Sorghum plasma membrane 66.32 75.55
GSMUA_Achr9P02950_001 Banana plasma membrane 71.74 75.31
GSMUA_Achr6P34530_001 Banana plasma membrane 67.15 74.22
PGSC0003DMT400005785 Potato cytosol, peroxisome, plasma membrane 31.34 73.12
VIT_09s0002g05370.t01 Wine grape mitochondrion, plasma membrane 70.03 71.85
KXG20401 Sorghum plasma membrane 70.44 70.83
KRH09797 Soybean endoplasmic reticulum 69.07 70.57
KRH23522 Soybean mitochondrion 69.0 70.55
PGSC0003DMT400034130 Potato cytosol, mitochondrion, peroxisome, plasma membrane, plastid 59.74 69.96
VIT_09s0002g05560.t01 Wine grape plasma membrane 69.48 69.67
Solyc12g019640.1.1 Tomato plasma membrane 29.01 69.57
KRH47506 Soybean endoplasmic reticulum 68.04 69.57
PGSC0003DMT400076208 Potato plastid 68.66 69.51
Solyc12g098210.1.1 Tomato plastid 67.83 69.4
Solyc08g067620.2.1 Tomato nucleus 69.14 69.37
VIT_04s0008g04790.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 68.31 69.36
Solyc05g053590.2.1 Tomato cytosol, mitochondrion, peroxisome, plasma membrane 67.15 69.33
Solyc09g091660.2.1 Tomato plastid 68.38 69.24
PGSC0003DMT400061280 Potato cytosol, nucleus, plasma membrane, plastid 67.7 68.78
Solyc12g100180.1.1 Tomato mitochondrion, nucleus, plasma membrane, plastid 67.63 68.71
Bra026124.1-P Field mustard cytosol, nucleus, plasma membrane, plastid 66.53 68.65
CDY36570 Canola cytosol, nucleus, plasma membrane, plastid 66.53 68.65
CDY39660 Canola cytosol, nucleus, plasma membrane 66.39 68.41
KRH61824 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 67.97 68.39
KRH52503 Soybean cytosol, peroxisome, plasma membrane 67.9 68.37
EER98758 Sorghum cytosol, nucleus, plasma membrane 67.83 68.25
PGSC0003DMT400076209 Potato plasma membrane 67.01 68.18
AT1G15520.1 Thale cress plastid 66.53 68.17
EES04729 Sorghum mitochondrion 67.15 67.89
KRH16029 Soybean cytosol 66.39 66.9
KRH67471 Soybean endoplasmic reticulum 66.26 66.85
KRH05088 Soybean endoplasmic reticulum 65.98 66.48
PGSC0003DMT400048449 Potato cytosol, peroxisome, plasma membrane 55.49 66.47
KRG95762 Soybean mitochondrion 64.88 66.15
KRH47220 Soybean plasma membrane 42.11 64.56
EES08826 Sorghum mitochondrion 63.1 64.11
KRH09795 Soybean endoplasmic reticulum 66.32 63.95
PGSC0003DMT400043433 Potato endoplasmic reticulum, plasma membrane 6.65 63.82
PGSC0003DMT400005783 Potato cytosol, peroxisome, plasma membrane 68.52 63.23
EES00201 Sorghum plasma membrane 58.09 59.4
OQU76555 Sorghum mitochondrion, plasma membrane 52.54 59.24
Solyc12g019620.1.1 Tomato cytosol, nucleus, plasma membrane 33.26 57.95
KRG95752 Soybean cytosol, peroxisome, plasma membrane 63.99 57.91
KXG37059 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 54.39 56.48
KXG36359 Sorghum plastid 55.97 56.01
OQU81756 Sorghum plasma membrane 47.26 54.81
EES01392 Sorghum cytosol, peroxisome, plasma membrane 54.94 54.09
OQU80771 Sorghum plasma membrane 41.91 52.04
VIT_04s0008g04840.t01 Wine grape plasma membrane 36.83 47.99
OQU89274 Sorghum plasma membrane 32.17 47.86
OQU91497 Sorghum cytosol, nucleus, plasma membrane 44.58 47.07
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300UniProt:A0A1B6Q4K7InterPro:AAA+_ATPaseInterPro:ABCG_PDR_1InterPro:ABCG_PDR_2
InterPro:ABC_2_transInterPro:ABC_trans_NInterPro:ABC_transporter-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887InterPro:IPR003439EnsemblPlants:KXG32865ProteinID:KXG32865
ProteinID:KXG32865.1InterPro:P-loop_NTPaseInterPro:PDR_assocPFAM:PF00005PFAM:PF01061PFAM:PF08370
PFAM:PF14510PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF273SMART:SM00382EnsemblPlantsGene:SORBI_3003G216000
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI00081ABE85SEG:seg::
Description
hypothetical protein
Coordinates
chr3:-:55096403..55103733
Molecular Weight (calculated)
163329.0 Da
IEP (calculated)
7.199
GRAVY (calculated)
0.090
Length
1458 amino acids
Sequence
(BLAST)
0001: MDAAGDIQKV ASMRRGGSVS MWRRGDDVFS RSSREEDDEE ALRWAALEKL PTYDRVRRAI VPLDLGADGA EAPGRKGLVD VDVLSLGPRD RRALLERLVH
0101: VADEDNERFL LKLKDRVDRV GIDMPTIEVR FQNLGAEAEV RVGSSGLPTV LNSVVNTVEE AANALHILPS RKQIMPILHD VSGIIKPRRL TLLLGPPGSG
0201: KTTFLLALAG RLGKDLKFSG KVTYNGHEMT EFVPERTAAY ISQHDLHIGE MTVRETLAFS ARCQGVGSRF EMLTELSRRE KAASIKPDAD IDAFMKASAM
0301: GGQDANVVTD YILKILGLEI CADTMVGDEM LRGISGGQRK RVTTGEMLVG PSRALFMDEI STGLDSSTTF QIVNSLRQSI HILGGTAVIS LLQPAPETYN
0401: LFDDIILLSD GQVVYQGPRE EVLEFFESVG FRCPERKGVA DFLQEVTSKK DQKQYWARLD APYRFVSVKE FATAFKSFHT GRAIANELAV PFDKSKSHPA
0501: ALTTTRYGVS GKELLKANID REILLMKRNS FVYIFRTFQL VLMSIIVMTL FFRTKMKHDT ITDGGIYLGA VFFGVLLTMF NGFSELALTV FKLPVFFKQR
0601: DLLFFPAWSY TIPSWILKIP ITFIEVGGYV FLTYYVIGFD PNVSRFFKQY LILLAVNQMA AALFRFIGGA SRNMIVSNVF ASFMLLVVMV LGGFILQKDK
0701: IKKWWIWGYW ISPMMYAQNA ISVNEMLGHS WDKILNSTAS NETLGVQSLK SRGVFTEAKW YWIGFGAMVG FTILFNALFT LALTYLKPYG NSWPSVSEEE
0801: LQEKHANIKG EVLDGNHLVS ASTHQSTGVN TETDSAIMED DSVSTKKGMI LPFDPLSLTF DNIKYSVDMP QEMKAQGVQE DRLELLKGVS GSFRPGVLTA
0901: LMGVSGAGKT TLMDVLAGRK TGGYIEGDIR ISGYPKKQET FARVSGYCEQ NDIHSPQVTV YESLLFSAWL RLPKDVDSNK RKIFIEEVME LVELTPLRNA
1001: LVGLPGVNGL STEQRKRLTI AVELVANPSI IFMDEPTSGL DARAAAIVMR TVRNTVDTGR TVVCTIHQPS IDIFEAFDEL FLMKRGGEEI YAGPLGHHSS
1101: DLIKYFEGIQ GVSKIKDGYN PATWMLEVTA TSQEQILGVD FSDIYKKSEL YQRNKVLIKE LSQPVPGSSD LHFASTYAQS SITQCVACLW KQNLSYWRNP
1201: PYNTVRFFFT TIIALLLGTI FWDLGGKVST SQDLMNALGS MYSAVLFIGI MNCTSVQPVV AVERTVFYRE RAAGMYSAFP YAFGQVVIEL PYALVQDILY
1301: GVIVYSMIGF EWTAAKFFWY LFFGYFTLLY FTFYGMMAVG LTPNYHIASI VSSAFYAIWN LFSGFIIPRP KTPIWWRWYC WICPVAWTLY GLVVSQFGDI
1401: MTPMDDNNRT VVVSQYVEDY FGFKHSWLGW VAAVVVAFAV LFATLFGFAI MKLNFQKR
Best Arabidopsis Sequence Match ( AT1G15520.1 )
(BLAST)
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.