CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 4
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0554800-01	Rice	plasma membrane	81.9	90.75
TraesCS7B01G271500.1	Wheat	cytosol	42.38	89.25
HORVU7Hr1G088630.1	Barley	vacuole	89.64	89.15
TraesCS7A01G356200.1	Wheat	plasma membrane	79.66	86.34
Zm00001d046277_P002	Maize	cytosol, nucleus, plasma membrane	95.13	79.87
Zm00001d036986_P002	Maize	plasma membrane	93.12	79.84
CDY30162	Canola	plasma membrane	48.65	70.75
CDY69529	Canola	plasma membrane	38.75	70.17
GSMUA_Achr9P16240_001	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	80.12	69.07
GSMUA_Achr11P...	Banana	plasma membrane	72.85	65.42
AT3G16340.1	Thale cress	plasma membrane	70.22	64.12
CDX67921	Canola	plasma membrane, plastid	68.75	63.96
CDX97743	Canola	plasma membrane	69.22	63.34
KRH23404	Soybean	plasma membrane	72.54	63.08
PGSC0003DMT400006729	Potato	plastid	73.01	62.93
Bra021173.1-P	Field mustard	plasma membrane	68.75	62.92
Solyc03g120980.2.1	Tomato	plastid	72.93	62.87
CDY39621	Canola	plastid	69.37	62.47
Bra003527.1-P	Field mustard	plasma membrane, plastid	69.37	62.29
CDY20193	Canola	plasma membrane, plastid	66.59	62.12
Bra026156.1-P	Field mustard	plastid	69.22	61.98
CDY36534	Canola	plastid	68.75	61.95
AT1G59870.1	Thale cress	plasma membrane, plastid	69.61	61.27
Bra016669.1-P	Field mustard	plastid	67.83	61.03
CDX83991	Canola	plastid	68.06	59.95
EES01392	Sorghum	cytosol, peroxisome, plasma membrane	68.29	59.62
EES03260	Sorghum	plasma membrane	56.77	57.34
OQU81756	Sorghum	plasma membrane	54.99	56.56
EES04729	Sorghum	mitochondrion	60.56	54.3
CDY68747	Canola	plastid	35.03	52.98
KXG32863	Sorghum	cytosol, peroxisome, plasma membrane	59.32	52.86
CDY69102	Canola	plastid	34.65	52.58
KXG32865	Sorghum	plasma membrane	59.24	52.54
EES03255	Sorghum	cytosol, peroxisome, plasma membrane, plastid	59.16	52.29
EES08826	Sorghum	mitochondrion	57.62	51.92
KXG32860	Sorghum	plasma membrane	58.39	51.61
EER98908	Sorghum	cytosol, nucleus, plasma membrane	57.77	51.13
KXG20401	Sorghum	plasma membrane	56.92	50.76
KXG37059	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	54.99	50.64
EES00201	Sorghum	plasma membrane	55.61	50.42
EER98758	Sorghum	cytosol, nucleus, plasma membrane	56.23	50.17
OQU80771	Sorghum	plasma membrane	45.24	49.83
CDY70099	Canola	cytosol	15.93	47.91
KXG36359	Sorghum	plastid	53.83	47.77
OQU89274	Sorghum	plasma membrane	35.27	46.53
Bra027171.1-P	Field mustard	plasma membrane	69.14	46.51
OQU91497	Sorghum	cytosol, nucleus, plasma membrane	46.95	43.95

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1W0VTH6	InterPro:AAA+_ATPase	InterPro:ABCG_PDR_2	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
ProteinID:OQU76554.1	EnsemblPlants:OQU76555	ProteinID:OQU76555	ProteinID:OQU76555.1	InterPro:P-loop_NTPase	InterPro:PDR_assoc
PFAM:PF00005	PFAM:PF01061	PFAM:PF08370	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF224
SMART:SM00382	EnsemblPlantsGene:SORBI_3010G165500	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0009DC8A8E	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:48920369..48930191

Molecular Weight (calculated)

146099.0 Da

IEP (calculated)

8.156

GRAVY (calculated)

0.120

Length

1293 amino acids

Sequence
(BLAST)

0001: MTLLLGPPSS GKTTLLLALA GKLDTALRRA GEVTYNGFRL DEFVPQKTAA YISQTDVHVG EMTVKETLDF SARCQGVGTK YDLMTELARR EKEAGIRPEP
0101: EVDLFMKATS MEGVGSSLQT DYTLRILGLD ICADTIVGDQ MQRGISGGQK KRVTTGEMIV GPTKVLFMDE ISTGLDSSTT FQIVKCLQQI VHLGEATILM
0201: SLLQPAPETF DLFDDIILLS EGQIVYQGPR EYVLEFFESC GFCCPERKGT ADFLQEVTSR KDQEQYWADK RRPYRYISVP EFAQRFKRFH VGLQVENHLS
0301: LPFDKSRSHQ AALVFSKHSV STTELLKASF DKEWLLIKRN SFVYIFKTIQ LIIIALVAST VFLRTHMHTR NQDDGVLYIG ALLFTLIVNM FNGFAELSLA
0401: ITRLPVFYKH RDLLFYPAWV FTLPNVILRI PFSIIECVAW VLVTYYTIGL APEAERFFKH LLLVFLIQQM AGGLFRAIAG LCRSMIIAHT GGALSLLLFF
0501: VLGGFLLPKA FIPKWWIWGY WISPLMYGYN ALAVNEFYAP RWMNKFVPDE NGVPKRLGVA MLEGSSIFVD KNWYWIGAAG LLGFTIFFNV LFTLSLMYLN
0601: PLGKPQAVIS EETAKEAEGN GHAKETIRNG STKSKDGSHN KEMKEMRLSA RLSSSSSNGV SRVMSIGSNG AAPARGMVLP FNPLAMSFDN MNYYVDMPAE
0701: MKQQGVQDDK LQLLREVTGS FRPGVLTALM GVSGAGKTTL MDVLAGRKTG GYIEGDIRIA GYPKNQATFA RISGYCEQND IHSPQVTVRE SLIYSAFLRL
0801: PGQIGDQEIT DDIKIQFVDE VMELVELDNL RDALVGLPGI TGLSTEQRKR LTIAVELVAN PSIIFMDEPT SGLDARAAAI VMRTVRNTVD TGRTVVCTIH
0901: QPSIDIFEAF DELLLLKRGG QVIYSGKLGR NSQKMVEYFE AIPGVPKIKD KYNPATWMLE VSSVAAEVRL KMDFAEYYKT SDLYKQNKVV VNQLSQPEPG
1001: TSDLYFPTEY SQSTIGQFKA CLWKQWLTYW RSPDYNLVRF TFTLFVALLL GSIFWRIGTN MGDANSLRMV IGAMYTAVMF VGINNCSTVQ PIVSIERTVF
1101: YRERAAGMYS AIPYALSQVV IEVPYVFVQT TYYTVIVYAM MSFQWTAAKF FWFFFVSYFS FLYFTYYGMM TVSISPNHEV AAIFAAAFYS LFNLFSGFFI
1201: PRPKIPRWWI WYYWICPLAW TVYGLIVTQY GDLQKLITVP GETDKQTISY YVTHHFGYHR DFMPVVAPVL VLFAVFFAFM YAVCIKKLNF QQR

Best Arabidopsis Sequence Match ( AT3G16340.1 )
(BLAST)

0001: METLSRSLSK SLGELLASNS NNHFSRRSGS TIDDHDEEAL KWAALEKLPT FARLRTTIIH PHEDLVDVTK LGVDDRQKFI DSIFKVTEED NEKFLKKFRN
0101: RIDRVRIKLP TVEVRFEKVT IEANCHIGKR ALPTLPNAAL NIAERGLRLL GFNFTKTTKV TILRDVSGII KPSRMTLLLG PPSSGKTTLL LALAGKLDQS
0201: LKVTGRVTYN GHGLEEFVPQ KTSAYISQND VHVGVMTVQE TLDFSARCQG VGTRYDLLSE LVRREKDAGI LPEPEVDLFM KSIAAGNVKS SLITDYTLRI
0301: LGLDICKDTV VGDEMIRGIS GGQKKRVTTG EMIVGPTKTL FMDEISTGLD SSTTYQIVKC LQEIVRFTDA TVLMSLLQPA PETFELFDDI ILLSEGQIVY
0401: QGPRDHVLTF FETCGFKCPD RKGTADFLQE VTSRKDQEQY WADSKKPYSY ISVSEFSKRF RTFHVGANLE KDLSVPYDRF KSHPASLVFK KHSVPKSQLF
0501: KVCWDRELLL MKRNAFFYIT KTVQIIIMAL IASTVYLRTE MGTKNESDGA VYIGALMFSM IVNMFNGFAE LALMIQRLPV FYKQRDLLFH PPWTFSLPTF
0601: LLGIPISIFE SVVWVTITYY MIGFAPELSR FLKHLLVIFL TQQMAGGIFR FIAATCRSMI LANTGGALVI LLLFLLGGFI VPRGEIPKWW KWAYWVSPMA
0701: YTYDALTVNE MLAPRWINQP SSDNSTSLGL AVLEIFDIFT DPNWYWIGVG GILGFTVLFN ILVTLALTFL NPLEKQQAVV SKENTEENRA ENGSKSKSID
0801: VKRGMVLPFT PLTMSFDNVN YYVDMPKEMK EQGVSKDKLQ LLKEVTGVFR PGVLTALMGV SGAGKTTLMD VLAGRKTGGY IEGDIRISGF PKRQETFARI
0901: SGYCEQNDIH SPQVTVKESL IYSAFLRLPK EVTKYEKMRF VDEVMELVEL ESLKDAVVGL PGITGLSTEQ RKRLTIAVEL VANPSIIFMD EPTSGLDARA
1001: AAIVMRTVRN TVDTGRTVVC TIHQPSIDIF EAFDELLLLK RGGQVIYAGP LGQNSHKIIE YFQAIHGVPK IKEKYNPATW MLEVSSMAAE AKLEIDFAEH
1101: YKTSSLYQQN KNLVKELSTP PQGASDLYFS TRFSQSLLGQ FKSCLWKQWI TYWRTPDYNL ARFFFTLAAA VMLGSIFWKV GTKRENANDL TKVIGAMYAA
1201: VLFVGVNNSS SVQPLIAVER SVFYRERAAE MYSALPYALA QVVCEIPYVL IQTTYYTLII YAMMCFEWTL AKFFWFYFVS FMSFLYFTYY GMMTVALTPN
1301: QQVAAVFAGA FYGLFNLFSG FVIPRPRIPK WWIWYYWICP VAWTVYGLIV SQYGDVEDTI KVPGMANDPT IKWYIENHYG YDADFMIPIA TVLVGFTLFF
1401: AFMFAFGIRT LNFQQR

Arabidopsis Description

ABCG29ABC transporter G family member 29 [Source:UniProtKB/Swiss-Prot;Acc:Q94A18]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.